RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 PLAUP00749 431 aa8.37□□□□□ -1.07
MSL3-207ENST00000398527 HOXA4Q00056 320 aaPredicted RBP8.37□□□□□ -1.07
MSL3-207ENST00000398527 SPINK9Q5DT21 86 aa8.37□□□□□ -1.07
MSL3-207ENST00000398527 MIC13Q5XKP0 118 aa8.37□□□□□ -1.07
MSL3-207ENST00000398527 FAM19A2Q8N3H0 131 aa8.37□□□□□ -1.07
MSL3-207ENST00000398527 IGHV3OR15-7A0A075B7D8 119 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 MDFIC2A0A1B0GVS7 189 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 Q6ZRU5 148 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 C1orf229Q6ZS94 237 aaPredicted RBP8.36□□□□□ -1.07
MSL3-207ENST00000398527 U3KQE9 123 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 DSCAMO60469 2012 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 TRBV7-7A0A0K0K1E9 115 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 BUB3O43684 328 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 PQLC2Q6ZP29 291 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 MMD2Q8IY49 270 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 C15orf53Q8NAA6 179 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 PLEKHA3Q9HB20 300 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 AMMECR1Q9Y4X0 333 aaPredicted RBP8.36□□□□□ -1.07
MSL3-207ENST00000398527 VPS13CQ709C8 3753 aa8.36□□□□□ -1.07
MSL3-207ENST00000398527 A0A0G2JNJ9 132 aa8.35□□□□□ -1.07
MSL3-207ENST00000398527 IGLL5B9A064 214 aa8.35□□□□□ -1.07
MSL3-207ENST00000398527 APCSP02743 223 aa8.35□□□□□ -1.07
MSL3-207ENST00000398527 OR5AL1P0C617 328 aa8.35□□□□□ -1.07
MSL3-207ENST00000398527 CEND1Q8N111 149 aa8.35□□□□□ -1.07
MSL3-207ENST00000398527 C10orf105Q8TEF2 133 aa8.35□□□□□ -1.07
MSL3-207ENST00000398527 Q9UFV3 132 aa8.35□□□□□ -1.07
MSL3-207ENST00000398527 C16orf97H3BN30 126 aa8.35□□□□□ -1.07
MSL3-207ENST00000398527 PYYP10082 97 aa8.35□□□□□ -1.07
MSL3-207ENST00000398527 TRBV20OR9-2A0A075B6H5 130 aa8.34□□□□□ -1.07
MSL3-207ENST00000398527 PAX4O43316 350 aa8.34□□□□□ -1.07
MSL3-207ENST00000398527 ZNF137PP52743 207 aa8.34□□□□□ -1.07
MSL3-207ENST00000398527 IL36BQ9NZH7 164 aa8.34□□□□□ -1.07
MSL3-207ENST00000398527 A8MWV9 139 aa8.34□□□□□ -1.08
MSL3-207ENST00000398527 EPM2AB3EWF7 344 aa8.34□□□□□ -1.08
MSL3-207ENST00000398527 SCO2A0A1W2PP80 73 aa8.33□□□□□ -1.08
MSL3-207ENST00000398527 TCRAP04437 139 aa8.33□□□□□ -1.08
MSL3-207ENST00000398527 SAA4P35542 130 aa8.33□□□□□ -1.08
MSL3-207ENST00000398527 TMEM190Q8WZ59 177 aa8.33□□□□□ -1.08
MSL3-207ENST00000398527 ZNF714Q96N38 554 aa8.33□□□□□ -1.08
MSL3-207ENST00000398527 RBM12B-AS1Q9P1G2 102 aa8.33□□□□□ -1.08
MSL3-207ENST00000398527 RAI1Q7Z5J4 1906 aaPredicted RBP8.33□□□□□ -1.08
MSL3-207ENST00000398527 TRAV8-1A0A0A6YYK1 113 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 TEX50A0A1B0GTY4 177 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 TCL1BO95988 128 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 RNASE2P10153 161 aaKnown RBP8.32□□□□□ -1.08
MSL3-207ENST00000398527 C22orf34Q6ZV56 151 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 PDPNQ86YL7 162 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 POM121L12Q8N7R1 296 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 THAP8Q8NA92 274 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 TMEM167AQ8TBQ9 72 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 OSTCQ9NRP0 149 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 NDUFA4L2Q9NRX3 87 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 KNCNA6PVL3 124 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 DEFA4P12838 97 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 SRSF9Q13242 221 aaKnown RBP eCLIP8.32□□□□□ -1.08
MSL3-207ENST00000398527 PVRIGQ6DKI7 326 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 AMN1Q8IY45 258 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 SSMEM1Q8WWF3 244 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 NABP2Q9BQ15 211 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 AAMDCQ9H7C9 122 aa8.32□□□□□ -1.08
MSL3-207ENST00000398527 hADV29S1A0JD25 119 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 FSTL3O95633 263 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 CCL13Q99616 98 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 KAAG1Q9UBP8 84 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 ANK2Q01484 3957 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 DYSFO75923 2080 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 TRAV12-2A0A075B6T6 113 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 TRAV8-2A0A0B4J237 113 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 LY6G6DO95868 133 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 ERHP84090 104 aaKnown RBP8.31□□□□□ -1.08
MSL3-207ENST00000398527 PRR15Q8IV56 129 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 NUP35Q8NFH5 326 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 OR2T6Q8NHC8 308 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 ODF3Q96PU9 254 aa8.31□□□□□ -1.08
MSL3-207ENST00000398527 SAA1P0DJI8 122 aaPredicted RBP8.3□□□□□ -1.08
MSL3-207ENST00000398527 HLA-DMBP28068 263 aa8.3□□□□□ -1.08
MSL3-207ENST00000398527 FAM216BQ8N7L0 139 aa8.3□□□□□ -1.08
MSL3-207ENST00000398527 IMUPQ9GZP8 106 aa8.3□□□□□ -1.08
MSL3-207ENST00000398527 SNURFLB1AK76 121 aa8.3□□□□□ -1.08
MSL3-207ENST00000398527 K7ERJ3 54 aa8.3□□□□□ -1.08
MSL3-207ENST00000398527 IGKCP01834 107 aa8.3□□□□□ -1.08
MSL3-207ENST00000398527 SUB1P53999 127 aaKnown RBP eCLIP8.3□□□□□ -1.08
MSL3-207ENST00000398527 AKAP6Q13023 2319 aa8.3□□□□□ -1.08
MSL3-207ENST00000398527 NEXN-AS1Q8NBZ9 246 aa8.3□□□□□ -1.08
MSL3-207ENST00000398527 LEAP2Q969E1 77 aa8.3□□□□□ -1.08
MSL3-207ENST00000398527 V9GYV3 84 aa8.3□□□□□ -1.08
MSL3-207ENST00000398527 CADP27708 2225 aa8.29□□□□□ -1.08
MSL3-207ENST00000398527 TRAV2A0A0B4J234 112 aa8.29□□□□□ -1.08
MSL3-207ENST00000398527 MIR17HGQ75NE6 70 aa8.29□□□□□ -1.08
MSL3-207ENST00000398527 ZNF503Q96F45 646 aa8.29□□□□□ -1.08
MSL3-207ENST00000398527 C17orf77Q96MU5 243 aa8.29□□□□□ -1.08
MSL3-207ENST00000398527 IGKV1OR2-108A0A075B7D4 117 aa8.29□□□□□ -1.08
MSL3-207ENST00000398527 IGKV1-16P04430 117 aa8.29□□□□□ -1.08
MSL3-207ENST00000398527 BSPH1Q075Z2 132 aa8.29□□□□□ -1.08
MSL3-207ENST00000398527 LY6G5BQ8NDX9 201 aa8.29□□□□□ -1.08
MSL3-207ENST00000398527 Q9H8V8 135 aa8.29□□□□□ -1.08
MSL3-207ENST00000398527 HRNRQ86YZ3 2850 aaPredicted RBP8.28□□□□□ -1.08
MSL3-207ENST00000398527 OVOL3O00110 214 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms