RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 PCNPQ8WW12 178 aaKnown RBP13.05□□□□□ -0.32
COLCA2-201ENST00000398035 PGPEP1LA6NFU8 196 aa13.05□□□□□ -0.32
COLCA2-201ENST00000398035 M0R036 132 aa13.05□□□□□ -0.32
COLCA2-201ENST00000398035 RS1O15537 224 aa13.05□□□□□ -0.32
COLCA2-201ENST00000398035 NKX2-5P52952 324 aaPredicted RBP13.05□□□□□ -0.32
COLCA2-201ENST00000398035 ESRGQ1W209 222 aa13.05□□□□□ -0.32
COLCA2-201ENST00000398035 ZNF506Q5JVG8 444 aa13.05□□□□□ -0.32
COLCA2-201ENST00000398035 CFAP126Q5VTH2 177 aa13.05□□□□□ -0.32
COLCA2-201ENST00000398035 SH2D6Q7Z4S9 175 aa13.05□□□□□ -0.32
COLCA2-201ENST00000398035 NHLRC2Q8NBF2 726 aa13.05□□□□□ -0.32
COLCA2-201ENST00000398035 ZNRF2Q8NHG8 242 aa13.05□□□□□ -0.32
COLCA2-201ENST00000398035 UPK3BQ9BT76 320 aa13.05□□□□□ -0.32
COLCA2-201ENST00000398035 MED9Q9NWA0 146 aa13.05□□□□□ -0.32
COLCA2-201ENST00000398035 ARMS2P0C7Q2 107 aa13.04□□□□□ -0.32
COLCA2-201ENST00000398035 NEGR1Q7Z3B1 354 aa13.04□□□□□ -0.32
COLCA2-201ENST00000398035 Q9H8V8 135 aa13.04□□□□□ -0.32
COLCA2-201ENST00000398035 BIN3Q9NQY0 253 aa13.04□□□□□ -0.32
COLCA2-201ENST00000398035 M0R2N4 97 aa13.03□□□□□ -0.32
COLCA2-201ENST00000398035 ZFP2Q6ZN57 461 aa13.03□□□□□ -0.32
COLCA2-201ENST00000398035 Q6ZR54 194 aa13.03□□□□□ -0.32
COLCA2-201ENST00000398035 LYPD6BQ8NI32 183 aa13.03□□□□□ -0.32
COLCA2-201ENST00000398035 FAM210AQ96ND0 272 aa13.03□□□□□ -0.32
COLCA2-201ENST00000398035 MRPS16Q9Y3D3 137 aaKnown RBP13.03□□□□□ -0.32
COLCA2-201ENST00000398035 PHLDA3Q9Y5J5 127 aa13.03□□□□□ -0.32
COLCA2-201ENST00000398035 KMT2AQ03164 3969 aa13.02□□□□□ -0.32
COLCA2-201ENST00000398035 IGLV2-18A0A075B6J9 118 aa13.02□□□□□ -0.33
COLCA2-201ENST00000398035 TRBV6-4A0A1B0GX49 114 aa13.02□□□□□ -0.33
COLCA2-201ENST00000398035 GRIFINA4D1Z8 144 aa13.02□□□□□ -0.33
COLCA2-201ENST00000398035 CXCL1P09341 107 aa13.02□□□□□ -0.33
COLCA2-201ENST00000398035 MGST1P10620 155 aaKnown RBP13.02□□□□□ -0.33
COLCA2-201ENST00000398035 GATA1P15976 413 aaPredicted RBP13.02□□□□□ -0.33
COLCA2-201ENST00000398035 SRIP30626 198 aa13.02□□□□□ -0.33
COLCA2-201ENST00000398035 GNG4P50150 75 aa13.02□□□□□ -0.33
COLCA2-201ENST00000398035 SOHLH1Q5JUK2 328 aa13.02□□□□□ -0.33
COLCA2-201ENST00000398035 LINC00336Q6ZUF6 198 aa13.02□□□□□ -0.33
COLCA2-201ENST00000398035 DAZAP1Q96EP5 407 aaKnown RBP13.02□□□□□ -0.33
COLCA2-201ENST00000398035 PRADC1Q9BSG0 188 aa13.02□□□□□ -0.33
COLCA2-201ENST00000398035 K7EQD1 137 aa13.01□□□□□ -0.33
COLCA2-201ENST00000398035 MED14OSP0DP75 135 aa13.01□□□□□ -0.33
COLCA2-201ENST00000398035 GYPEP15421 78 aa13.01□□□□□ -0.33
COLCA2-201ENST00000398035 DERL1Q9BUN8 251 aa13.01□□□□□ -0.33
COLCA2-201ENST00000398035 SCRT2Q9NQ03 307 aa13.01□□□□□ -0.33
COLCA2-201ENST00000398035 H3BVH4 76 aa13□□□□□ -0.33
COLCA2-201ENST00000398035 CENPWQ5EE01 88 aa13□□□□□ -0.33
COLCA2-201ENST00000398035 PRR27Q6MZM9 219 aa13□□□□□ -0.33
COLCA2-201ENST00000398035 BOLA1Q9Y3E2 137 aa13□□□□□ -0.33
COLCA2-201ENST00000398035 TMSB15BA0A087X1C1 80 aa12.99□□□□□ -0.33
COLCA2-201ENST00000398035 NBDYA0A0U1RRE5 68 aa12.99□□□□□ -0.33
COLCA2-201ENST00000398035 RBFOX3A6NFN3 312 aa12.99□□□□□ -0.33
COLCA2-201ENST00000398035 DMRTA1Q5VZB9 504 aa12.99□□□□□ -0.33
COLCA2-201ENST00000398035 LYPD5Q6UWN5 251 aa12.99□□□□□ -0.33
COLCA2-201ENST00000398035 ZNF575Q86XF7 245 aa12.99□□□□□ -0.33
COLCA2-201ENST00000398035 ZFP82Q8N141 532 aa12.99□□□□□ -0.33
COLCA2-201ENST00000398035 TMEM250H0YL14 139 aa12.98□□□□□ -0.33
COLCA2-201ENST00000398035 RHODO00212 210 aa12.98□□□□□ -0.33
COLCA2-201ENST00000398035 RHOHQ15669 191 aa12.98□□□□□ -0.33
COLCA2-201ENST00000398035 TTC32Q5I0X7 151 aa12.98□□□□□ -0.33
COLCA2-201ENST00000398035 SLC25A29Q8N8R3 303 aa12.98□□□□□ -0.33
COLCA2-201ENST00000398035 MUC4Q99102 2169 aa12.98□□□□□ -0.33
COLCA2-201ENST00000398035 A0A1W2PPQ1 181 aa12.97□□□□□ -0.33
COLCA2-201ENST00000398035 RAB19A4D1S5 217 aa12.97□□□□□ -0.33
COLCA2-201ENST00000398035 NDUFS6O75380 124 aaKnown RBP12.97□□□□□ -0.33
COLCA2-201ENST00000398035 RPS20P60866 119 aaKnown RBP12.97□□□□□ -0.33
COLCA2-201ENST00000398035 C1orf134Q5TEV5 83 aa12.97□□□□□ -0.33
COLCA2-201ENST00000398035 XKRY2A2RUG3 117 aa12.96□□□□□ -0.33
COLCA2-201ENST00000398035 BTF3P20290 206 aaKnown RBP12.96□□□□□ -0.33
COLCA2-201ENST00000398035 SSBP4Q9BWG4 385 aaPredicted RBP12.96□□□□□ -0.33
COLCA2-201ENST00000398035 PARLQ9H300 379 aa12.96□□□□□ -0.33
COLCA2-201ENST00000398035 IGHV3-73A0A0B4J1V6 119 aa12.96□□□□□ -0.34
COLCA2-201ENST00000398035 IGLV2-8P01709 118 aa12.96□□□□□ -0.34
COLCA2-201ENST00000398035 OR5AL1P0C617 328 aa12.96□□□□□ -0.34
COLCA2-201ENST00000398035 SFRP2Q96HF1 295 aa12.96□□□□□ -0.34
COLCA2-201ENST00000398035 VPS13DQ5THJ4 4388 aa12.95□□□□□ -0.34
COLCA2-201ENST00000398035 M0R381 172 aa12.95□□□□□ -0.34
COLCA2-201ENST00000398035 SIVA1O15304 175 aa12.95□□□□□ -0.34
COLCA2-201ENST00000398035 TIRAPP58753 221 aa12.95□□□□□ -0.34
COLCA2-201ENST00000398035 EIF5A2Q9GZV4 153 aaKnown RBP12.95□□□□□ -0.34
COLCA2-201ENST00000398035 K7EP13 123 aa12.94□□□□□ -0.34
COLCA2-201ENST00000398035 SNAI2O43623 268 aa12.94□□□□□ -0.34
COLCA2-201ENST00000398035 P01737 135 aa12.94□□□□□ -0.34
COLCA2-201ENST00000398035 RPL19P84098 196 aaKnown RBP12.94□□□□□ -0.34
COLCA2-201ENST00000398035 TRBV20OR9-2A0A075B6H5 130 aa12.93□□□□□ -0.34
COLCA2-201ENST00000398035 C19orf71A6NCJ1 209 aa12.93□□□□□ -0.34
COLCA2-201ENST00000398035 NXPH4O95158 308 aa12.93□□□□□ -0.34
COLCA2-201ENST00000398035 UFSP1Q6NVU6 142 aa12.93□□□□□ -0.34
COLCA2-201ENST00000398035 TRAV9-2A0A087WT02 112 aa12.92□□□□□ -0.34
COLCA2-201ENST00000398035 SPANXN1Q5VSR9 72 aa12.92□□□□□ -0.34
COLCA2-201ENST00000398035 TEX261Q6UWH6 196 aa12.92□□□□□ -0.34
COLCA2-201ENST00000398035 OR2D3Q8NGH3 330 aa12.92□□□□□ -0.34
COLCA2-201ENST00000398035 JPT2Q9H910 190 aa12.92□□□□□ -0.34
COLCA2-201ENST00000398035 RTL8CO15255 209 aa12.91□□□□□ -0.34
COLCA2-201ENST00000398035 C6orf223Q8N319 242 aa12.91□□□□□ -0.34
COLCA2-201ENST00000398035 SAMD10Q9BYL1 202 aa12.91□□□□□ -0.34
COLCA2-201ENST00000398035 LOC100131303A0A0U1RQF7 123 aa12.9□□□□□ -0.34
COLCA2-201ENST00000398035 F2Z2F3 143 aa12.9□□□□□ -0.34
COLCA2-201ENST00000398035 CRYGDP07320 174 aa12.9□□□□□ -0.34
COLCA2-201ENST00000398035 FAM74A4Q5TZK3 123 aa12.9□□□□□ -0.34
COLCA2-201ENST00000398035 PRSS29PA6NIE9 313 aa12.89□□□□□ -0.35
COLCA2-201ENST00000398035 TOR2AQ5JU69 321 aa12.89□□□□□ -0.35
COLCA2-201ENST00000398035 FER1L6-AS1Q8NA97 138 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms