RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 H7C2G1 150 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 PPP1R17O96001 155 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 LY6EQ16553 131 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 NEXN-AS1Q8NBZ9 246 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 CKS1BP61024 79 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 Q5PR19 223 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 SYT8Q8NBV8 401 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 TP53TG1Q9Y2A0 90 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 PTPRQQ9UMZ3 2332 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 PF4V1P10720 104 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 SCGB1A1P11684 91 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 FAM159AQ6UWV7 190 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 C20orf173Q96LM9 149 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 ATP6V0BQ99437 205 aa11.22□□□□□ -0.61
CCNF-202ENST00000397066 DUSP14O95147 198 aaKnown RBP11.21□□□□□ -0.61
CCNF-202ENST00000397066 PSMG3-AS1Q96PY0 264 aa11.21□□□□□ -0.61
CCNF-202ENST00000397066 PLEKHB2Q96CS7 222 aa11.21□□□□□ -0.62
CCNF-202ENST00000397066 SIRPDQ9H106 197 aa11.21□□□□□ -0.62
CCNF-202ENST00000397066 A0A087WWL8 130 aa11.21□□□□□ -0.62
CCNF-202ENST00000397066 NPFFO15130 113 aa11.21□□□□□ -0.62
CCNF-202ENST00000397066 ZNF256Q9Y2P7 627 aaPredicted RBP11.21□□□□□ -0.62
CCNF-202ENST00000397066 CENPVL3A0A0U1RRI6 287 aa11.2□□□□□ -0.62
CCNF-202ENST00000397066 CDSNQ15517 529 aa11.2□□□□□ -0.62
CCNF-202ENST00000397066 Q1RN00 199 aa11.2□□□□□ -0.62
CCNF-202ENST00000397066 LGALS3P17931 250 aaKnown RBP11.2□□□□□ -0.62
CCNF-202ENST00000397066 IGHV4-4A0A075B6R2 117 aa11.19□□□□□ -0.62
CCNF-202ENST00000397066 PRSS47A8MTI9 375 aa11.19□□□□□ -0.62
CCNF-202ENST00000397066 ATRXP46100 2492 aa11.19□□□□□ -0.62
CCNF-202ENST00000397066 UNQ9165/PRO28630Q6UXU0 137 aa11.19□□□□□ -0.62
CCNF-202ENST00000397066 LENEPQ9Y5L5 61 aa11.19□□□□□ -0.62
CCNF-202ENST00000397066 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 PAPPA-AS1Q5QFB9 102 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 BRD3OSQ6XYD6 125 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 CD7P09564 240 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 FOXI1Q12951 378 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 BPESC1Q9GZL8 116 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 K7ENP7 123 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 TRBV12-3P01733 135 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 ZFP2Q6ZN57 461 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 PTH2Q96A98 100 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 MOB4Q9Y3A3 225 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 ZNF292O60281 2723 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 SPINK8P0C7L1 97 aa11.18□□□□□ -0.62
CCNF-202ENST00000397066 C11orf86A6NJI1 115 aa11.17□□□□□ -0.62
CCNF-202ENST00000397066 ZFAND2AQ8N6M9 145 aa11.17□□□□□ -0.62
CCNF-202ENST00000397066 FAM223BA6NKX1 122 aa11.17□□□□□ -0.62
CCNF-202ENST00000397066 ZNF56Q15929 161 aa11.17□□□□□ -0.62
CCNF-202ENST00000397066 MORN3Q6PF18 240 aaPredicted RBP11.17□□□□□ -0.62
CCNF-202ENST00000397066 FAM223AQ8IWN6 122 aa11.17□□□□□ -0.62
CCNF-202ENST00000397066 SPATA25Q9BR10 227 aa11.17□□□□□ -0.62
CCNF-202ENST00000397066 IGHV3-64A0A075B6Q5 118 aa11.17□□□□□ -0.62
CCNF-202ENST00000397066 RPL39P62891 51 aaKnown RBP11.17□□□□□ -0.62
CCNF-202ENST00000397066 TSPAN13O95857 204 aa11.16□□□□□ -0.62
CCNF-202ENST00000397066 PMVKQ15126 192 aa11.16□□□□□ -0.62
CCNF-202ENST00000397066 FBXL19-AS1Q494R0 122 aa11.16□□□□□ -0.62
CCNF-202ENST00000397066 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
CCNF-202ENST00000397066 RHPN1-AS1Q9BWJ2 59 aa11.16□□□□□ -0.62
CCNF-202ENST00000397066 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.62
CCNF-202ENST00000397066 A8MWV9 139 aa11.15□□□□□ -0.62
CCNF-202ENST00000397066 VCYO14598 125 aa11.15□□□□□ -0.62
CCNF-202ENST00000397066 JPT2Q9H910 190 aa11.15□□□□□ -0.62
CCNF-202ENST00000397066 ADORA2A-AS1P86434 159 aa11.15□□□□□ -0.62
CCNF-202ENST00000397066 C11orf71Q6IPW1 123 aa11.15□□□□□ -0.62
CCNF-202ENST00000397066 RAX2Q96IS3 184 aa11.15□□□□□ -0.62
CCNF-202ENST00000397066 MUC6Q6W4X9 2439 aa11.15□□□□□ -0.62
CCNF-202ENST00000397066 CSMD1Q96PZ7 3565 aa11.15□□□□□ -0.62
CCNF-202ENST00000397066 SDHAF1A6NFY7 115 aa11.14□□□□□ -0.63
CCNF-202ENST00000397066 ID1P41134 155 aa11.14□□□□□ -0.63
CCNF-202ENST00000397066 NDUFA4O00483 81 aa11.14□□□□□ -0.63
CCNF-202ENST00000397066 TCF15Q12870 199 aa11.14□□□□□ -0.63
CCNF-202ENST00000397066 U3KQE9 123 aa11.14□□□□□ -0.63
CCNF-202ENST00000397066 IGF2RP11717 2491 aa11.13□□□□□ -0.63
CCNF-202ENST00000397066 TRAV2A0A0B4J234 112 aa11.13□□□□□ -0.63
CCNF-202ENST00000397066 LINC01619G3V211 115 aa11.13□□□□□ -0.63
CCNF-202ENST00000397066 ITLN2Q8WWU7 325 aaPredicted RBP11.13□□□□□ -0.63
CCNF-202ENST00000397066 BEX4Q9NWD9 120 aaPredicted RBP11.13□□□□□ -0.63
CCNF-202ENST00000397066 CFAP126Q5VTH2 177 aa11.13□□□□□ -0.63
CCNF-202ENST00000397066 GEMIN7Q9H840 131 aaKnown RBP11.13□□□□□ -0.63
CCNF-202ENST00000397066 PRO0461Q9UI25 63 aa11.13□□□□□ -0.63
CCNF-202ENST00000397066 HTN1P15515 57 aa11.12□□□□□ -0.63
CCNF-202ENST00000397066 PPDPFLQ8WWR9 84 aa11.12□□□□□ -0.63
CCNF-202ENST00000397066 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■■■□ 21.5
CCNF-202ENST00000397066 KLRB1Q12918 225 aa11.12□□□□□ -0.63
CCNF-202ENST00000397066 SUMO4Q6EEV6 95 aa11.12□□□□□ -0.63
CCNF-202ENST00000397066 NDUFA11Q86Y39 141 aa11.12□□□□□ -0.63
CCNF-202ENST00000397066 CREBBPQ92793 2442 aa11.12□□□□□ -0.63
CCNF-202ENST00000397066 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
CCNF-202ENST00000397066 J3QQQ9 107 aa11.11□□□□□ -0.63
CCNF-202ENST00000397066 RNASE3P12724 160 aaKnown RBP11.11□□□□□ -0.63
CCNF-202ENST00000397066 PRO1854Q9UHT4 67 aa11.11□□□□□ -0.63
CCNF-202ENST00000397066 A0A0J9YY99 117 aa11.1□□□□□ -0.63
CCNF-202ENST00000397066 TCL1BO95988 128 aa11.1□□□□□ -0.63
CCNF-202ENST00000397066 PRSS2P07478 247 aa11.1□□□□□ -0.63
CCNF-202ENST00000397066 IGHV1-69DA0A0B4J2H0 117 aa11.1□□□□□ -0.63
CCNF-202ENST00000397066 TRBV20-1A0A075B6N2 111 aa11.1□□□□□ -0.63
CCNF-202ENST00000397066 C9JAW5 83 aa11.09□□□□□ -0.63
CCNF-202ENST00000397066 MT-ATP8P03928 68 aa11.09□□□□□ -0.63
CCNF-202ENST00000397066 Q6ZS46 218 aa11.09□□□□□ -0.63
CCNF-202ENST00000397066 TEN1Q86WV5 123 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms