RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 IGHV4OR15-8A0A075B7B6 117 aa12.08□□□□□ -0.48
GNE-202ENST00000396594 A0A087WW49 117 aa12.08□□□□□ -0.48
GNE-202ENST00000396594 CFHR3Q02985 330 aa12.08□□□□□ -0.48
GNE-202ENST00000396594 SLURP1P55000 103 aa12.08□□□□□ -0.48
GNE-202ENST00000396594 PATE2Q6UY27 113 aa12.08□□□□□ -0.48
GNE-202ENST00000396594 Q6YL49 198 aa12.08□□□□□ -0.48
GNE-202ENST00000396594 ORMDL1Q9P0S3 153 aa12.08□□□□□ -0.48
GNE-202ENST00000396594 KIF26AQ9ULI4 1882 aaPredicted RBP12.07□□□□□ -0.48
GNE-202ENST00000396594 FGF6P10767 208 aa12.07□□□□□ -0.48
GNE-202ENST00000396594 NCKAP5O14513 1909 aa12.07□□□□□ -0.48
GNE-202ENST00000396594 LYRM9A8MSI8 78 aa12.07□□□□□ -0.48
GNE-202ENST00000396594 SMAD5-AS1Q9Y6J3 95 aa12.07□□□□□ -0.48
GNE-202ENST00000396594 PFN2P35080 140 aa12.06□□□□□ -0.48
GNE-202ENST00000396594 C10orf142B7Z368 130 aa12.06□□□□□ -0.48
GNE-202ENST00000396594 NDUFA1O15239 70 aa12.06□□□□□ -0.48
GNE-202ENST00000396594 LMO4P61968 165 aa12.06□□□□□ -0.48
GNE-202ENST00000396594 TOMM6Q96B49 74 aa12.06□□□□□ -0.48
GNE-202ENST00000396594 C11orf1Q9H5F2 150 aa12.06□□□□□ -0.48
GNE-202ENST00000396594 A0A0J9YX75 114 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 C11orf86A6NJI1 115 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 CFC1BP0CG36 223 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 CFC1P0CG37 223 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 PDE6GP18545 87 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 A0A1W2PPM0 123 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 PHF3Q92576 2039 aaKnown RBP12.05□□□□□ -0.48
GNE-202ENST00000396594 IGKV2D-24A0A075B6R9 120 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 TRAV26-2A0A0B4J265 109 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 GNRH2O43555 120 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 GYPEP15421 78 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 NPSP0C0P6 89 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 IGLL1P15814 213 aa12.05□□□□□ -0.48
GNE-202ENST00000396594 ZNF124Q15973 351 aa12.04□□□□□ -0.48
GNE-202ENST00000396594 ZFP36P26651 326 aaKnown RBP12.04□□□□□ -0.48
GNE-202ENST00000396594 OCIAD2Q56VL3 154 aa12.03□□□□□ -0.48
GNE-202ENST00000396594 PRO0255Q9UI72 69 aa12.03□□□□□ -0.48
GNE-202ENST00000396594 COX7B2Q8TF08 81 aa12.03□□□□□ -0.48
GNE-202ENST00000396594 TP53BP1Q12888 1972 aaPredicted RBP12.03□□□□□ -0.48
GNE-202ENST00000396594 NUP210LQ5VU65 1888 aa12.03□□□□□ -0.48
GNE-202ENST00000396594 FUSP35637 526 aaKnown RBP eCLIP12.03□□□□□ -0.48
GNE-202ENST00000396594 BLCAPP62952 87 aa12.02□□□□□ -0.48
GNE-202ENST00000396594 SHISA2Q6UWI4 295 aa12.02□□□□□ -0.48
GNE-202ENST00000396594 C17orf77Q96MU5 243 aa12.02□□□□□ -0.48
GNE-202ENST00000396594 IGHV3-38A0A0C4DH36 116 aa12.02□□□□□ -0.48
GNE-202ENST00000396594 SPRNQ5BIV9 151 aa12.02□□□□□ -0.48
GNE-202ENST00000396594 CAMK2N2Q96S95 79 aa12.02□□□□□ -0.48
GNE-202ENST00000396594 ETDCA0A1B0GVM5 59 aa12.02□□□□□ -0.49
GNE-202ENST00000396594 SPINK8P0C7L1 97 aa12.02□□□□□ -0.49
GNE-202ENST00000396594 IGLV2-14P01704 120 aa12.02□□□□□ -0.49
GNE-202ENST00000396594 UBE2BP63146 152 aa12.02□□□□□ -0.49
GNE-202ENST00000396594 KIR2DL5BA0A0G2JN68 375 aa12.01□□□□□ -0.49
GNE-202ENST00000396594 KIR2DL5BA0A0G2JPC4 375 aa12.01□□□□□ -0.49
GNE-202ENST00000396594 KIR2DL5AQ8N109 375 aa12.01□□□□□ -0.49
GNE-202ENST00000396594 Q9H8V8 135 aa12.01□□□□□ -0.49
GNE-202ENST00000396594 FANCD2OSQ96PS1 177 aa12.01□□□□□ -0.49
GNE-202ENST00000396594 C12orf74Q32Q52 190 aa12.01□□□□□ -0.49
GNE-202ENST00000396594 Q71RC1 249 aaPredicted RBP12.01□□□□□ -0.49
GNE-202ENST00000396594 HHLA3Q9XRX5 114 aa12.01□□□□□ -0.49
GNE-202ENST00000396594 DNAJC9-AS1A6NH13 148 aa12.01□□□□□ -0.49
GNE-202ENST00000396594 INTS1Q8N201 2190 aaKnown RBP12□□□□□ -0.49
GNE-202ENST00000396594 CARD19Q96LW7 228 aa12□□□□□ -0.49
GNE-202ENST00000396594 C19orf71A6NCJ1 209 aa12□□□□□ -0.49
GNE-202ENST00000396594 JMJD7-PLA2G4BH0Y9G9 81 aa12□□□□□ -0.49
GNE-202ENST00000396594 C11orf71Q6IPW1 123 aa12□□□□□ -0.49
GNE-202ENST00000396594 SELENOKQ9Y6D0 94 aa12□□□□□ -0.49
GNE-202ENST00000396594 COL4A3Q01955 1670 aa12□□□□□ -0.49
GNE-202ENST00000396594 MUC22E2RYF6 1773 aaPredicted RBP12□□□□□ -0.49
GNE-202ENST00000396594 IGHV1-58A0A0C4DH39 117 aa11.99□□□□□ -0.49
GNE-202ENST00000396594 IGHV4-31P0DP07 118 aa11.99□□□□□ -0.49
GNE-202ENST00000396594 MDFICQ9P1T7 246 aa11.99□□□□□ -0.49
GNE-202ENST00000396594 KMT2EQ8IZD2 1858 aa11.99□□□□□ -0.49
GNE-202ENST00000396594 MYO7BQ6PIF6 2116 aa11.99□□□□□ -0.49
GNE-202ENST00000396594 E9PLD3 99 aa11.99□□□□□ -0.49
GNE-202ENST00000396594 CRYGBP07316 175 aa11.99□□□□□ -0.49
GNE-202ENST00000396594 MPDZO75970 2070 aa11.99□□□□□ -0.49
GNE-202ENST00000396594 IGKV1OR2-108A0A075B7D4 117 aa11.98□□□□□ -0.49
GNE-202ENST00000396594 TIRAPP58753 221 aa11.98□□□□□ -0.49
GNE-202ENST00000396594 SMIM20Q8N5G0 67 aa11.98□□□□□ -0.49
GNE-202ENST00000396594 ACACAQ13085 2346 aa11.98□□□□□ -0.49
GNE-202ENST00000396594 YLPM1P49750 1951 aaKnown RBP11.98□□□□□ -0.49
GNE-202ENST00000396594 F6UB75 175 aa11.98□□□□□ -0.49
GNE-202ENST00000396594 SPATA12Q7Z6I5 190 aa11.98□□□□□ -0.49
GNE-202ENST00000396594 ICE1Q9Y2F5 2266 aa11.98□□□□□ -0.49
GNE-202ENST00000396594 Q8N1Y9 231 aa11.98□□□□□ -0.49
GNE-202ENST00000396594 PIK3CD-AS1Q5SR53 167 aa11.97□□□□□ -0.49
GNE-202ENST00000396594 ZNF625Q96I27 306 aaPredicted RBP11.97□□□□□ -0.49
GNE-202ENST00000396594 OPRPNQ99935 248 aaPredicted RBP11.97□□□□□ -0.49
GNE-202ENST00000396594 MAP6D1Q9H9H5 199 aa11.97□□□□□ -0.49
GNE-202ENST00000396594 LY6LH3BQJ8 138 aa11.97□□□□□ -0.49
GNE-202ENST00000396594 XCL1P47992 114 aa11.97□□□□□ -0.49
GNE-202ENST00000396594 MUC7Q8TAX7 377 aa11.97□□□□□ -0.49
GNE-202ENST00000396594 EIF4EBP1Q13541 118 aaPredicted RBP11.96□□□□□ -0.49
GNE-202ENST00000396594 SPRY2O43597 315 aa11.96□□□□□ -0.49
GNE-202ENST00000396594 VSIG2Q96IQ7 327 aa11.96□□□□□ -0.5
GNE-202ENST00000396594 NXPH4O95158 308 aa11.95□□□□□ -0.5
GNE-202ENST00000396594 ZNF580Q9UK33 172 aa11.95□□□□□ -0.5
GNE-202ENST00000396594 APRG1Q8IVJ8 170 aa11.95□□□□□ -0.5
GNE-202ENST00000396594 DEFB125Q8N687 156 aa11.95□□□□□ -0.5
GNE-202ENST00000396594 DKK2Q9UBU2 259 aa11.95□□□□□ -0.5
GNE-202ENST00000396594 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.95□□□□□ -0.5
GNE-202ENST00000396594 IGKV2-29A2NJV5 120 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms