RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 IGKCP01834 107 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 LAGE3Q14657 143 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 ZFAND2AQ8N6M9 145 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 USMG5Q96IX5 58 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 TRAV26-2A0A0B4J265 109 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 H3BVH4 76 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 IGHG2P01859 326 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 INSL3P51460 131 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 ETDBQ3ZM63 59 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 MTURNQ8N3F0 131 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 MRAP2Q96G30 205 aa12.13□□□□□ -0.47
CCHCR1-202ENST00000396263 FOXC2Q99958 501 aa12.12□□□□□ -0.47
CCHCR1-202ENST00000396263 OR10J6PQ8NGY7 276 aa12.12□□□□□ -0.47
CCHCR1-202ENST00000396263 NHP2Q9NX24 153 aaKnown RBP12.12□□□□□ -0.47
CCHCR1-202ENST00000396263 TENM4Q6N022 2769 aa12.12□□□□□ -0.47
CCHCR1-202ENST00000396263 USP9YO00507 2555 aaPredicted RBP12.11□□□□□ -0.47
CCHCR1-202ENST00000396263 TRAV21A0A0B4J279 112 aa12.11□□□□□ -0.47
CCHCR1-202ENST00000396263 DPM2O94777 84 aa12.11□□□□□ -0.47
CCHCR1-202ENST00000396263 COX6B1P14854 86 aa12.11□□□□□ -0.47
CCHCR1-202ENST00000396263 TCTEX1D4Q5JR98 221 aa12.11□□□□□ -0.47
CCHCR1-202ENST00000396263 C10orf105Q8TEF2 133 aa12.11□□□□□ -0.47
CCHCR1-202ENST00000396263 H3BMG7 143 aa12.11□□□□□ -0.47
CCHCR1-202ENST00000396263 IGHV4-38-2P0DP08 117 aa12.11□□□□□ -0.47
CCHCR1-202ENST00000396263 CHAC1Q9BUX1 264 aa12.11□□□□□ -0.47
CCHCR1-202ENST00000396263 HIGD1BQ9P298 99 aa12.11□□□□□ -0.47
CCHCR1-202ENST00000396263 A6NDX4 124 aa12.1□□□□□ -0.47
CCHCR1-202ENST00000396263 F8W1H4 67 aa12.1□□□□□ -0.47
CCHCR1-202ENST00000396263 MYOZ3Q8TDC0 251 aa12.1□□□□□ -0.47
CCHCR1-202ENST00000396263 FAM19A4Q96LR4 140 aa12.1□□□□□ -0.47
CCHCR1-202ENST00000396263 J3QR89 54 aa12.1□□□□□ -0.47
CCHCR1-202ENST00000396263 AMTNQ6UX39 209 aa12.1□□□□□ -0.47
CCHCR1-202ENST00000396263 HLA-DRB4P13762 266 aa12.09□□□□□ -0.47
CCHCR1-202ENST00000396263 LY6EQ16553 131 aa12.09□□□□□ -0.47
CCHCR1-202ENST00000396263 APRG1Q8IVJ8 170 aa12.09□□□□□ -0.47
CCHCR1-202ENST00000396263 HLA-DRB4X5D2U9 266 aa12.09□□□□□ -0.47
CCHCR1-202ENST00000396263 E9PLD3 99 aa12.09□□□□□ -0.47
CCHCR1-202ENST00000396263 MED14OSP0DP75 135 aa12.09□□□□□ -0.47
CCHCR1-202ENST00000396263 SMIM2Q9BVW6 85 aa12.09□□□□□ -0.47
CCHCR1-202ENST00000396263 GEMIN7Q9H840 131 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-202ENST00000396263 H3BUX3 64 aa12.08□□□□□ -0.48
CCHCR1-202ENST00000396263 ATP5J2P56134 94 aa12.08□□□□□ -0.48
CCHCR1-202ENST00000396263 KLK15Q9H2R5 256 aa12.08□□□□□ -0.48
CCHCR1-202ENST00000396263 TRBV7-9A0A0J9YWB2 115 aa12.08□□□□□ -0.48
CCHCR1-202ENST00000396263 IGLL5B9A064 214 aa12.08□□□□□ -0.48
CCHCR1-202ENST00000396263 IGHV3-11P01762 117 aa12.08□□□□□ -0.48
CCHCR1-202ENST00000396263 ZC2HC1BQ5TFG8 222 aa12.08□□□□□ -0.48
CCHCR1-202ENST00000396263 POLQO75417 2590 aa12.07□□□□□ -0.48
CCHCR1-202ENST00000396263 A0A087WX48 190 aa12.07□□□□□ -0.48
CCHCR1-202ENST00000396263 J3KRW8 73 aa12.07□□□□□ -0.48
CCHCR1-202ENST00000396263 ASIPP42127 132 aa12.07□□□□□ -0.48
CCHCR1-202ENST00000396263 MRPL35Q9NZE8 188 aaKnown RBP12.07□□□□□ -0.48
CCHCR1-202ENST00000396263 IGLV1-40P01703 118 aa12.06□□□□□ -0.48
CCHCR1-202ENST00000396263 PF4V1P10720 104 aa12.06□□□□□ -0.48
CCHCR1-202ENST00000396263 GTSCR1Q86UQ5 136 aa12.06□□□□□ -0.48
CCHCR1-202ENST00000396263 DPH3P1Q9H4G8 78 aa12.06□□□□□ -0.48
CCHCR1-202ENST00000396263 PTPN13Q12923 2485 aa12.06□□□□□ -0.48
CCHCR1-202ENST00000396263 ANKRD17O75179 2603 aaKnown RBP12.06□□□□□ -0.48
CCHCR1-202ENST00000396263 TRBV25-1A0A075B6N4 114 aa12.06□□□□□ -0.48
CCHCR1-202ENST00000396263 S100A4P26447 101 aaKnown RBP12.06□□□□□ -0.48
CCHCR1-202ENST00000396263 ANXA2RQ3ZCQ2 193 aa12.06□□□□□ -0.48
CCHCR1-202ENST00000396263 C20orf78Q9BR46 151 aa12.06□□□□□ -0.48
CCHCR1-202ENST00000396263 NBPF19A0A087WUL8 3843 aa12.06□□□□□ -0.48
CCHCR1-202ENST00000396263 M0R381 172 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 DEFB1P60022 68 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 BLCAPP62952 87 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 CEND1Q8N111 149 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 RASL10AQ92737 203 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 ZNF479Q96JC4 524 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 TMEM160Q9NX00 188 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 PRO0461Q9UI25 63 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 IGHV4-30-2A0A087WSY4 118 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 SUMO2P61956 95 aaKnown RBP12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 ORMDL2Q53FV1 153 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 RHPN1-AS1Q9BWJ2 59 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 PHLDA3Q9Y5J5 127 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 DOPEY2Q9Y3R5 2298 aa12.05□□□□□ -0.48
CCHCR1-202ENST00000396263 TRAV12-1A0A0B4J245 112 aa12.04□□□□□ -0.48
CCHCR1-202ENST00000396263 SLC25A16P16260 332 aa12.04□□□□□ -0.48
CCHCR1-202ENST00000396263 KRTAP10-9P60411 292 aa12.04□□□□□ -0.48
CCHCR1-202ENST00000396263 RPL11P62913 178 aaKnown RBP12.04□□□□□ -0.48
CCHCR1-202ENST00000396263 TM2D2Q9BX73 214 aa12.04□□□□□ -0.48
CCHCR1-202ENST00000396263 PLA2G2AP14555 144 aa12.04□□□□□ -0.48
CCHCR1-202ENST00000396263 PLNP26678 52 aa12.04□□□□□ -0.48
CCHCR1-202ENST00000396263 CFHR3Q02985 330 aa12.04□□□□□ -0.48
CCHCR1-202ENST00000396263 Q6ZS46 218 aa12.04□□□□□ -0.48
CCHCR1-202ENST00000396263 ABCA12Q86UK0 2595 aa12.04□□□□□ -0.48
CCHCR1-202ENST00000396263 F6UB75 175 aa12.03□□□□□ -0.48
CCHCR1-202ENST00000396263 MSMBP08118 114 aa12.03□□□□□ -0.48
CCHCR1-202ENST00000396263 RNASE4P34096 147 aaKnown RBP12.03□□□□□ -0.48
CCHCR1-202ENST00000396263 DAZ1Q9NQZ3 744 aaKnown RBP12.03□□□□□ -0.48
CCHCR1-202ENST00000396263 C14orf178Q8N769 122 aaPredicted RBP12.03□□□□□ -0.48
CCHCR1-202ENST00000396263 TOMM6Q96B49 74 aa12.03□□□□□ -0.48
CCHCR1-202ENST00000396263 MRPL16Q9NX20 251 aaKnown RBP12.03□□□□□ -0.48
CCHCR1-202ENST00000396263 RNASE3P12724 160 aaKnown RBP12.02□□□□□ -0.48
CCHCR1-202ENST00000396263 GATA3P23771 443 aa12.02□□□□□ -0.48
CCHCR1-202ENST00000396263 GAGE13Q4V321 117 aa12.02□□□□□ -0.48
CCHCR1-202ENST00000396263 SPRY2O43597 315 aa12.02□□□□□ -0.49
CCHCR1-202ENST00000396263 LCNL1Q6ZST4 164 aa12.02□□□□□ -0.49
CCHCR1-202ENST00000396263 ZNF580Q9UK33 172 aa12.02□□□□□ -0.49
CCHCR1-202ENST00000396263 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms