RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 AP1S3Q96PC3 154 aa12.55□□□□□ -0.4
NUP50-202ENST00000396096 C7orf71A4D174 169 aa12.54□□□□□ -0.4
NUP50-202ENST00000396096 K7EMI3 77 aa12.54□□□□□ -0.4
NUP50-202ENST00000396096 ZNF688P0C7X2 276 aa12.54□□□□□ -0.4
NUP50-202ENST00000396096 FAM159AQ6UWV7 190 aa12.54□□□□□ -0.4
NUP50-202ENST00000396096 C2orf91Q6ZV80 131 aa12.54□□□□□ -0.4
NUP50-202ENST00000396096 C14orf178Q8N769 122 aaPredicted RBP12.54□□□□□ -0.4
NUP50-202ENST00000396096 DKK2Q9UBU2 259 aa12.54□□□□□ -0.4
NUP50-202ENST00000396096 BVES-AS1Q5T3Y7 98 aa12.53□□□□□ -0.4
NUP50-202ENST00000396096 BOD1L2Q8IYS8 172 aa12.53□□□□□ -0.4
NUP50-202ENST00000396096 SPRY2O43597 315 aa12.53□□□□□ -0.4
NUP50-202ENST00000396096 NUDT3O95989 172 aa12.53□□□□□ -0.4
NUP50-202ENST00000396096 PPP1R17O96001 155 aa12.53□□□□□ -0.4
NUP50-202ENST00000396096 SUMO2P61956 95 aaKnown RBP12.53□□□□□ -0.4
NUP50-202ENST00000396096 ORAOV1Q8WV07 137 aa12.53□□□□□ -0.4
NUP50-202ENST00000396096 KIF25-AS1Q9Y6Z4 181 aa12.53□□□□□ -0.4
NUP50-202ENST00000396096 MUC4Q99102 2169 aa12.51□□□□□ -0.41
NUP50-202ENST00000396096 DUSP14O95147 198 aaKnown RBP12.51□□□□□ -0.41
NUP50-202ENST00000396096 LINC00315P59091 139 aa12.51□□□□□ -0.41
NUP50-202ENST00000396096 ORMDL2Q53FV1 153 aa12.51□□□□□ -0.41
NUP50-202ENST00000396096 TMEM86BQ8N661 226 aa12.51□□□□□ -0.41
NUP50-202ENST00000396096 ZANQ9Y493 2812 aa12.51□□□□□ -0.41
NUP50-202ENST00000396096 PRSS1P07477 247 aa12.51□□□□□ -0.41
NUP50-202ENST00000396096 COX11Q9Y6N1 276 aa12.51□□□□□ -0.41
NUP50-202ENST00000396096 NAV2Q8IVL1 2488 aa12.5□□□□□ -0.41
NUP50-202ENST00000396096 TRAV12-3A0A0B4J271 114 aa12.5□□□□□ -0.41
NUP50-202ENST00000396096 SIVA1O15304 175 aa12.5□□□□□ -0.41
NUP50-202ENST00000396096 ADAMTSL5Q6ZMM2 481 aa12.5□□□□□ -0.41
NUP50-202ENST00000396096 FOXI2Q6ZQN5 318 aa12.5□□□□□ -0.41
NUP50-202ENST00000396096 C9orf85Q96MD7 179 aa12.5□□□□□ -0.41
NUP50-202ENST00000396096 HHLA3Q9XRX5 114 aa12.5□□□□□ -0.41
NUP50-202ENST00000396096 MGPP08493 103 aa12.49□□□□□ -0.41
NUP50-202ENST00000396096 RPL32P62910 135 aaKnown RBP12.49□□□□□ -0.41
NUP50-202ENST00000396096 TEX29Q8N6K0 151 aa12.49□□□□□ -0.41
NUP50-202ENST00000396096 OR9G4Q8NGQ1 327 aa12.49□□□□□ -0.41
NUP50-202ENST00000396096 RPL39LQ96EH5 51 aaKnown RBP12.49□□□□□ -0.41
NUP50-202ENST00000396096 FOXC2Q99958 501 aa12.49□□□□□ -0.41
NUP50-202ENST00000396096 IGKCP01834 107 aa12.48□□□□□ -0.41
NUP50-202ENST00000396096 CD7P09564 240 aa12.48□□□□□ -0.41
NUP50-202ENST00000396096 CDKN1BP46527 198 aa12.48□□□□□ -0.41
NUP50-202ENST00000396096 TCTEX1D4Q5JR98 221 aa12.48□□□□□ -0.41
NUP50-202ENST00000396096 DUX5Q96PT3 197 aa12.48□□□□□ -0.41
NUP50-202ENST00000396096 CSMD2Q7Z408 3487 aa12.48□□□□□ -0.41
NUP50-202ENST00000396096 IGHV3-16A0A0C4DH30 117 aa12.48□□□□□ -0.41
NUP50-202ENST00000396096 DPM2O94777 84 aa12.48□□□□□ -0.41
NUP50-202ENST00000396096 WFDC12Q8WWY7 111 aa12.48□□□□□ -0.41
NUP50-202ENST00000396096 TOMM6Q96B49 74 aa12.48□□□□□ -0.41
NUP50-202ENST00000396096 CREBBPQ92793 2442 aa12.48□□□□□ -0.41
NUP50-202ENST00000396096 CENPEQ02224 2701 aa12.47□□□□□ -0.41
NUP50-202ENST00000396096 TRAV2A0A0B4J234 112 aa12.47□□□□□ -0.41
NUP50-202ENST00000396096 LINC01619G3V211 115 aa12.47□□□□□ -0.41
NUP50-202ENST00000396096 NPSP0C0P6 89 aa12.47□□□□□ -0.41
NUP50-202ENST00000396096 AMTNQ6UX39 209 aa12.47□□□□□ -0.41
NUP50-202ENST00000396096 C4orf3Q8WVX3 66 aa12.47□□□□□ -0.41
NUP50-202ENST00000396096 DOPEY2Q9Y3R5 2298 aa12.47□□□□□ -0.41
NUP50-202ENST00000396096 A0A087WX48 190 aa12.46□□□□□ -0.41
NUP50-202ENST00000396096 TRAV12-1A0A0B4J245 112 aa12.46□□□□□ -0.41
NUP50-202ENST00000396096 SLURP1P55000 103 aa12.46□□□□□ -0.41
NUP50-202ENST00000396096 C18orf65Q6ZTR6 163 aa12.46□□□□□ -0.41
NUP50-202ENST00000396096 ABCA12Q86UK0 2595 aa12.46□□□□□ -0.42
NUP50-202ENST00000396096 A8MTW9 85 aa12.46□□□□□ -0.42
NUP50-202ENST00000396096 IGHV1OR15-1A0A075B7D0 117 aa12.45□□□□□ -0.42
NUP50-202ENST00000396096 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.45□□□□□ -0.42
NUP50-202ENST00000396096 HLA-DRB4P13762 266 aa12.45□□□□□ -0.42
NUP50-202ENST00000396096 TMEM97Q5BJF2 176 aa12.45□□□□□ -0.42
NUP50-202ENST00000396096 HLA-DRB4X5D2U9 266 aa12.45□□□□□ -0.42
NUP50-202ENST00000396096 KMT2BQ9UMN6 2715 aaPredicted RBP12.45□□□□□ -0.42
NUP50-202ENST00000396096 MXRA5Q9NR99 2828 aa12.44□□□□□ -0.42
NUP50-202ENST00000396096 TRAV12-2A0A075B6T6 113 aa12.44□□□□□ -0.42
NUP50-202ENST00000396096 TAX1BP3O14907 124 aa12.44□□□□□ -0.42
NUP50-202ENST00000396096 PEMTQ9UBM1 199 aa12.44□□□□□ -0.42
NUP50-202ENST00000396096 IGKV3-20P01619 116 aa12.44□□□□□ -0.42
NUP50-202ENST00000396096 NMUP48645 174 aa12.44□□□□□ -0.42
NUP50-202ENST00000396096 SEC11AP67812 179 aa12.44□□□□□ -0.42
NUP50-202ENST00000396096 SPINK13Q1W4C9 94 aa12.44□□□□□ -0.42
NUP50-202ENST00000396096 DEFB136Q30KP8 78 aa12.44□□□□□ -0.42
NUP50-202ENST00000396096 PCP2Q8IVA1 136 aa12.44□□□□□ -0.42
NUP50-202ENST00000396096 SYT8Q8NBV8 401 aa12.44□□□□□ -0.42
NUP50-202ENST00000396096 MRPL35Q9NZE8 188 aaKnown RBP12.44□□□□□ -0.42
NUP50-202ENST00000396096 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
NUP50-202ENST00000396096 Q6ZVH6 145 aa12.43□□□□□ -0.42
NUP50-202ENST00000396096 Q8N1Y9 231 aa12.43□□□□□ -0.42
NUP50-202ENST00000396096 CSTL1Q9H114 145 aa12.43□□□□□ -0.42
NUP50-202ENST00000396096 JPT2Q9H910 190 aa12.43□□□□□ -0.42
NUP50-202ENST00000396096 PLNP26678 52 aa12.42□□□□□ -0.42
NUP50-202ENST00000396096 POLR2KP53803 58 aaKnown RBP12.42□□□□□ -0.42
NUP50-202ENST00000396096 HSD52Q0P140 79 aa12.42□□□□□ -0.42
NUP50-202ENST00000396096 WFDC11Q8NEX6 87 aa12.42□□□□□ -0.42
NUP50-202ENST00000396096 OR11H1Q8NG94 326 aa12.42□□□□□ -0.42
NUP50-202ENST00000396096 SCGB3A1Q96QR1 104 aa12.42□□□□□ -0.42
NUP50-202ENST00000396096 MDFICQ9P1T7 246 aa12.42□□□□□ -0.42
NUP50-202ENST00000396096 TEX15Q9BXT5 2789 aa12.42□□□□□ -0.42
NUP50-202ENST00000396096 IGKV2D-26A0A0A0MRZ7 120 aa12.42□□□□□ -0.42
NUP50-202ENST00000396096 TRBV6-5A0A0K0K1A5 114 aa12.42□□□□□ -0.42
NUP50-202ENST00000396096 LINC01549A6NIU2 74 aa12.42□□□□□ -0.42
NUP50-202ENST00000396096 C2orf66Q6UXQ4 117 aa12.42□□□□□ -0.42
NUP50-202ENST00000396096 F8VRH5 84 aa12.41□□□□□ -0.42
NUP50-202ENST00000396096 H7C1H1 209 aa12.41□□□□□ -0.42
NUP50-202ENST00000396096 ZC2HC1BQ5TFG8 222 aa12.41□□□□□ -0.42
NUP50-202ENST00000396096 NEXN-AS1Q8NBZ9 246 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms