RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 SH2D6Q7Z4S9 175 aa9.16□□□□□ -0.94
SCAF11-203ENST00000395453 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
SCAF11-203ENST00000395453 INO80EQ8NBZ0 244 aaPredicted RBP9.16□□□□□ -0.94
SCAF11-203ENST00000395453 PTH2Q96A98 100 aa9.16□□□□□ -0.94
SCAF11-203ENST00000395453 LOC100131303A0A0U1RQF7 123 aa9.15□□□□□ -0.94
SCAF11-203ENST00000395453 A0A1W2PRE2 83 aa9.15□□□□□ -0.94
SCAF11-203ENST00000395453 FBLL1A6NHQ2 334 aaKnown RBP9.15□□□□□ -0.94
SCAF11-203ENST00000395453 CIDEAO60543 219 aa9.15□□□□□ -0.94
SCAF11-203ENST00000395453 GCGP01275 180 aa9.15□□□□□ -0.94
SCAF11-203ENST00000395453 PFN1P07737 140 aaKnown RBP9.15□□□□□ -0.94
SCAF11-203ENST00000395453 ZNF876PQ49A33 203 aa9.15□□□□□ -0.94
SCAF11-203ENST00000395453 RPL7L1Q6DKI1 246 aaKnown RBP9.15□□□□□ -0.94
SCAF11-203ENST00000395453 DPPA3Q6W0C5 159 aa9.15□□□□□ -0.94
SCAF11-203ENST00000395453 CYB561D1Q8N8Q1 229 aa9.15□□□□□ -0.94
SCAF11-203ENST00000395453 TMEM75Q8N9X5 138 aa9.15□□□□□ -0.94
SCAF11-203ENST00000395453 C9orf85Q96MD7 179 aa9.15□□□□□ -0.94
SCAF11-203ENST00000395453 RS1O15537 224 aa9.14□□□□□ -0.95
SCAF11-203ENST00000395453 EVI2AP22794 236 aa9.14□□□□□ -0.95
SCAF11-203ENST00000395453 ZNF726P1Q15940 193 aa9.14□□□□□ -0.95
SCAF11-203ENST00000395453 SMUG1Q53HV7 270 aa9.14□□□□□ -0.95
SCAF11-203ENST00000395453 SAPCD1Q5SSQ6 148 aa9.14□□□□□ -0.95
SCAF11-203ENST00000395453 CFAP126Q5VTH2 177 aa9.14□□□□□ -0.95
SCAF11-203ENST00000395453 BORCS7-ASMTA0A0B4J1R7 106 aa9.13□□□□□ -0.95
SCAF11-203ENST00000395453 RNASE3P12724 160 aaKnown RBP9.13□□□□□ -0.95
SCAF11-203ENST00000395453 ERVFC1-1P60608 527 aa9.13□□□□□ -0.95
SCAF11-203ENST00000395453 PRNTQ86SH4 94 aa9.13□□□□□ -0.95
SCAF11-203ENST00000395453 SLC25A29Q8N8R3 303 aa9.13□□□□□ -0.95
SCAF11-203ENST00000395453 LINC00479Q96M42 142 aa9.13□□□□□ -0.95
SCAF11-203ENST00000395453 MSRB1Q9NZV6 116 aa9.13□□□□□ -0.95
SCAF11-203ENST00000395453 A0A087WTM6 91 aa9.12□□□□□ -0.95
SCAF11-203ENST00000395453 FXYD6-FXYD2A0A087WZ82 144 aa9.12□□□□□ -0.95
SCAF11-203ENST00000395453 CTXND1A0A1B0GTU2 59 aa9.12□□□□□ -0.95
SCAF11-203ENST00000395453 TRBV6-4A0A1B0GX49 114 aa9.12□□□□□ -0.95
SCAF11-203ENST00000395453 PGPEP1LA6NFU8 196 aa9.12□□□□□ -0.95
SCAF11-203ENST00000395453 G3V3Q6 166 aa9.12□□□□□ -0.95
SCAF11-203ENST00000395453 EREGO14944 169 aa9.12□□□□□ -0.95
SCAF11-203ENST00000395453 CDPF1Q6NVV7 123 aa9.12□□□□□ -0.95
SCAF11-203ENST00000395453 OR2T35Q8NGX2 323 aa9.12□□□□□ -0.95
SCAF11-203ENST00000395453 TRAV34A0A0B4J273 112 aa9.11□□□□□ -0.95
SCAF11-203ENST00000395453 CRYGDP07320 174 aa9.11□□□□□ -0.95
SCAF11-203ENST00000395453 ZFP69Q49AA0 526 aa9.11□□□□□ -0.95
SCAF11-203ENST00000395453 ZNF506Q5JVG8 444 aa9.11□□□□□ -0.95
SCAF11-203ENST00000395453 PIK3CD-AS1Q5SR53 167 aa9.11□□□□□ -0.95
SCAF11-203ENST00000395453 C10orf126Q8N4M7 172 aa9.11□□□□□ -0.95
SCAF11-203ENST00000395453 NHLRC2Q8NBF2 726 aa9.11□□□□□ -0.95
SCAF11-203ENST00000395453 NKX6-2Q9C056 277 aaPredicted RBP9.11□□□□□ -0.95
SCAF11-203ENST00000395453 IGKV3D-20A0A0C4DH25 116 aa9.1□□□□□ -0.95
SCAF11-203ENST00000395453 IGHV3-38A0A0C4DH36 116 aa9.1□□□□□ -0.95
SCAF11-203ENST00000395453 PRADC1Q9BSG0 188 aa9.1□□□□□ -0.95
SCAF11-203ENST00000395453 ARL2-SNX15V9GYD0 113 aa9.1□□□□□ -0.95
SCAF11-203ENST00000395453 FAM74A7A6NL05 159 aa9.09□□□□□ -0.95
SCAF11-203ENST00000395453 FABP5P3A8MUU1 101 aa9.09□□□□□ -0.95
SCAF11-203ENST00000395453 FUSP35637 526 aaKnown RBP eCLIP9.09□□□□□ -0.95
SCAF11-203ENST00000395453 RHOHQ15669 191 aa9.09□□□□□ -0.95
SCAF11-203ENST00000395453 LINC01556Q5JQF7 62 aa9.09□□□□□ -0.95
SCAF11-203ENST00000395453 COX8CQ7Z4L0 72 aa9.09□□□□□ -0.95
SCAF11-203ENST00000395453 CYTL1Q9NRR1 136 aa9.09□□□□□ -0.95
SCAF11-203ENST00000395453 UBR4Q5T4S7 5183 aa9.09□□□□□ -0.95
SCAF11-203ENST00000395453 IGHV3-73A0A0B4J1V6 119 aa9.08□□□□□ -0.96
SCAF11-203ENST00000395453 PEX7O00628 323 aa9.08□□□□□ -0.96
SCAF11-203ENST00000395453 IFNA7P01567 189 aa9.08□□□□□ -0.96
SCAF11-203ENST00000395453 MGST1P10620 155 aaKnown RBP9.08□□□□□ -0.96
SCAF11-203ENST00000395453 PPT1P50897 306 aa9.08□□□□□ -0.96
SCAF11-203ENST00000395453 UBE2G2P60604 165 aa9.08□□□□□ -0.96
SCAF11-203ENST00000395453 DNLZQ5SXM8 178 aa9.08□□□□□ -0.96
SCAF11-203ENST00000395453 ZFP2Q6ZN57 461 aa9.08□□□□□ -0.96
SCAF11-203ENST00000395453 HIST1H2BAQ96A08 127 aa9.08□□□□□ -0.96
SCAF11-203ENST00000395453 IBA57-AS1B1ANH7 110 aa9.07□□□□□ -0.96
SCAF11-203ENST00000395453 SMR3BP02814 79 aaPredicted RBP9.07□□□□□ -0.96
SCAF11-203ENST00000395453 CRIP1P50238 77 aa9.07□□□□□ -0.96
SCAF11-203ENST00000395453 FGF8P55075 233 aaPredicted RBP9.07□□□□□ -0.96
SCAF11-203ENST00000395453 RGS21Q2M5E4 152 aa9.07□□□□□ -0.96
SCAF11-203ENST00000395453 AKR1C8PQ5T2L2 129 aa9.07□□□□□ -0.96
SCAF11-203ENST00000395453 LELP1Q5T871 98 aa9.07□□□□□ -0.96
SCAF11-203ENST00000395453 UFSP1Q6NVU6 142 aa9.07□□□□□ -0.96
SCAF11-203ENST00000395453 Q6ZSN1 163 aa9.07□□□□□ -0.96
SCAF11-203ENST00000395453 GTSF1LQ9H1H1 148 aa9.07□□□□□ -0.96
SCAF11-203ENST00000395453 IL36BQ9NZH7 164 aa9.07□□□□□ -0.96
SCAF11-203ENST00000395453 TRAV8-6A0A0B4J262 113 aa9.06□□□□□ -0.96
SCAF11-203ENST00000395453 A8MWV9 139 aa9.06□□□□□ -0.96
SCAF11-203ENST00000395453 FHITP49789 147 aa9.06□□□□□ -0.96
SCAF11-203ENST00000395453 Q86TA4 180 aa9.06□□□□□ -0.96
SCAF11-203ENST00000395453 ATP6V0E2Q8NHE4 81 aa9.06□□□□□ -0.96
SCAF11-203ENST00000395453 PARLQ9H300 379 aa9.06□□□□□ -0.96
SCAF11-203ENST00000395453 ZFP30Q9Y2G7 519 aa9.06□□□□□ -0.96
SCAF11-203ENST00000395453 MAP1LC3B2A6NCE7 125 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 LRCOL1A6NCL2 159 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 KRBOX1C9JBD0 128 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 ARPC5O15511 151 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 LINC00694P0DN24 101 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 S100A4P26447 101 aaKnown RBP9.05□□□□□ -0.96
SCAF11-203ENST00000395453 ASIPP42127 132 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 KRTAP10-1P60331 282 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 OR10J3Q5JRS4 329 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 ZC2HC1AQ96GY0 325 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 MAP1LC3BQ9GZQ8 125 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 TRBV6-1A0A0K0K1D8 114 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 B4DEV8 164 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 ZNF674Q2M3X9 581 aa9.05□□□□□ -0.96
SCAF11-203ENST00000395453 LCE1DQ5T752 114 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms