RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SPINK13Q1W4C9 94 aa11.07□□□□□ -0.64
CCT4-201ENST00000394440 NIT1Q86X76 327 aa11.07□□□□□ -0.64
CCT4-201ENST00000394440 GNRH2O43555 120 aa11.06□□□□□ -0.64
CCT4-201ENST00000394440 RAB4AP20338 218 aa11.06□□□□□ -0.64
CCT4-201ENST00000394440 NDUFA11Q86Y39 141 aa11.06□□□□□ -0.64
CCT4-201ENST00000394440 TRAV12-2A0A075B6T6 113 aa11.06□□□□□ -0.64
CCT4-201ENST00000394440 LINC00587B1AMM8 73 aa11.06□□□□□ -0.64
CCT4-201ENST00000394440 ORMDL3Q8N138 153 aa11.06□□□□□ -0.64
CCT4-201ENST00000394440 RBMY1BA6NDE4 496 aaKnown RBP11.05□□□□□ -0.64
CCT4-201ENST00000394440 RBMY1EA6NEQ0 496 aaKnown RBP11.05□□□□□ -0.64
CCT4-201ENST00000394440 RBMY1DP0C7P1 496 aaKnown RBP11.05□□□□□ -0.64
CCT4-201ENST00000394440 PMCHP20382 165 aa11.05□□□□□ -0.64
CCT4-201ENST00000394440 NSUN5P1Q3KNT7 163 aa11.05□□□□□ -0.64
CCT4-201ENST00000394440 ODF3L2Q3SX64 289 aa11.05□□□□□ -0.64
CCT4-201ENST00000394440 RNASEKQ6P5S7 137 aaKnown RBP11.05□□□□□ -0.64
CCT4-201ENST00000394440 FAM159AQ6UWV7 190 aa11.05□□□□□ -0.64
CCT4-201ENST00000394440 FAM19A2Q8N3H0 131 aa11.05□□□□□ -0.64
CCT4-201ENST00000394440 CHCHD1Q96BP2 118 aaKnown RBP11.05□□□□□ -0.64
CCT4-201ENST00000394440 HSBP1O75506 76 aa11.05□□□□□ -0.64
CCT4-201ENST00000394440 SPANXN1Q5VSR9 72 aa11.05□□□□□ -0.64
CCT4-201ENST00000394440 PRELID3AQ96N28 172 aa11.05□□□□□ -0.64
CCT4-201ENST00000394440 EVI2AP22794 236 aa11.04□□□□□ -0.64
CCT4-201ENST00000394440 S100A4P26447 101 aaKnown RBP11.04□□□□□ -0.64
CCT4-201ENST00000394440 CRXO43186 299 aaPredicted RBP11.04□□□□□ -0.64
CCT4-201ENST00000394440 NXPH4O95158 308 aa11.04□□□□□ -0.64
CCT4-201ENST00000394440 LINC00614P0C842 121 aa11.04□□□□□ -0.64
CCT4-201ENST00000394440 IGLV1-51P01701 117 aa11.03□□□□□ -0.64
CCT4-201ENST00000394440 PPBPP02775 128 aa11.03□□□□□ -0.64
CCT4-201ENST00000394440 SMKR1H3BMG3 65 aa11.02□□□□□ -0.64
CCT4-201ENST00000394440 NPYP01303 97 aa11.02□□□□□ -0.64
CCT4-201ENST00000394440 RBMY1A1P0DJD3 496 aaKnown RBP11.02□□□□□ -0.64
CCT4-201ENST00000394440 RBMY1CP0DJD4 496 aa11.02□□□□□ -0.64
CCT4-201ENST00000394440 CKS2P33552 79 aa11.02□□□□□ -0.64
CCT4-201ENST00000394440 RBMY1FQ15415 496 aaKnown RBP11.02□□□□□ -0.64
CCT4-201ENST00000394440 CLUHP3Q96NS8 147 aa11.02□□□□□ -0.64
CCT4-201ENST00000394440 PHLDA3Q9Y5J5 127 aa11.02□□□□□ -0.64
CCT4-201ENST00000394440 TIMM8BQ9Y5J9 83 aaPredicted RBP11.02□□□□□ -0.64
CCT4-201ENST00000394440 SPRY2O43597 315 aa11.02□□□□□ -0.65
CCT4-201ENST00000394440 NCR2O95944 276 aa11.02□□□□□ -0.65
CCT4-201ENST00000394440 PRIMA1Q86XR5 153 aa11.02□□□□□ -0.65
CCT4-201ENST00000394440 IGHV1OR15-1A0A075B7D0 117 aa11.01□□□□□ -0.65
CCT4-201ENST00000394440 SAP30O75446 220 aa11.01□□□□□ -0.65
CCT4-201ENST00000394440 GAS8-AS1O95177 125 aa11.01□□□□□ -0.65
CCT4-201ENST00000394440 CD7P09564 240 aa11.01□□□□□ -0.65
CCT4-201ENST00000394440 IGHV3-16A0A0C4DH30 117 aa11.01□□□□□ -0.65
CCT4-201ENST00000394440 IGHV1-24A0A0C4DH33 117 aa11.01□□□□□ -0.65
CCT4-201ENST00000394440 M0R381 172 aa11.01□□□□□ -0.65
CCT4-201ENST00000394440 SMIM15Q7Z3B0 74 aa11.01□□□□□ -0.65
CCT4-201ENST00000394440 C9orf85Q96MD7 179 aa11.01□□□□□ -0.65
CCT4-201ENST00000394440 LAMTOR2Q9Y2Q5 125 aa11.01□□□□□ -0.65
CCT4-201ENST00000394440 OR2K2Q8NGT1 345 aa11□□□□□ -0.65
CCT4-201ENST00000394440 FXYD7P58549 80 aa11□□□□□ -0.65
CCT4-201ENST00000394440 Q8N1Y9 231 aa11□□□□□ -0.65
CCT4-201ENST00000394440 LINC00482Q8N8I6 264 aa10.99□□□□□ -0.65
CCT4-201ENST00000394440 AP5S1Q9NUS5 200 aa10.99□□□□□ -0.65
CCT4-201ENST00000394440 IFI27P40305 119 aaPredicted RBP10.99□□□□□ -0.65
CCT4-201ENST00000394440 S100A12P80511 92 aa10.99□□□□□ -0.65
CCT4-201ENST00000394440 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.99□□□□□ -0.65
CCT4-201ENST00000394440 GSN-AS1Q9NRJ2 163 aa10.99□□□□□ -0.65
CCT4-201ENST00000394440 OR11H12B2RN74 326 aa10.98□□□□□ -0.65
CCT4-201ENST00000394440 G0S2P27469 103 aa10.98□□□□□ -0.65
CCT4-201ENST00000394440 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
CCT4-201ENST00000394440 Q8N976 141 aa10.98□□□□□ -0.65
CCT4-201ENST00000394440 PRSS3P2Q8NHM4 247 aa10.98□□□□□ -0.65
CCT4-201ENST00000394440 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
CCT4-201ENST00000394440 MDFICQ9P1T7 246 aa10.98□□□□□ -0.65
CCT4-201ENST00000394440 DNHD1Q96M86 4753 aa10.98□□□□□ -0.65
CCT4-201ENST00000394440 TNFRSF6BO95407 300 aa10.98□□□□□ -0.65
CCT4-201ENST00000394440 C3orf79P0CE67 100 aa10.98□□□□□ -0.65
CCT4-201ENST00000394440 GATA1P15976 413 aaPredicted RBP10.98□□□□□ -0.65
CCT4-201ENST00000394440 FAM110AQ9BQ89 295 aa10.98□□□□□ -0.65
CCT4-201ENST00000394440 SCGB1D1O95968 90 aa10.97□□□□□ -0.65
CCT4-201ENST00000394440 BEAN1Q3B7T3 259 aa10.97□□□□□ -0.65
CCT4-201ENST00000394440 FA2HQ7L5A8 372 aa10.97□□□□□ -0.65
CCT4-201ENST00000394440 DEFB125Q8N687 156 aa10.97□□□□□ -0.65
CCT4-201ENST00000394440 NRACQ8N912 160 aa10.97□□□□□ -0.65
CCT4-201ENST00000394440 AP1S3Q96PC3 154 aa10.97□□□□□ -0.65
CCT4-201ENST00000394440 KIF25-AS1Q9Y6Z4 181 aa10.97□□□□□ -0.65
CCT4-201ENST00000394440 JMJD1CQ15652 2540 aa10.97□□□□□ -0.65
CCT4-201ENST00000394440 KRTDAPP60985 99 aa10.97□□□□□ -0.65
CCT4-201ENST00000394440 TRPT1Q86TN4 253 aaKnown RBP10.97□□□□□ -0.65
CCT4-201ENST00000394440 POM121L12Q8N7R1 296 aa10.97□□□□□ -0.65
CCT4-201ENST00000394440 MRAP2Q96G30 205 aa10.97□□□□□ -0.65
CCT4-201ENST00000394440 LOC389332A0A1B0GUA5 103 aa10.96□□□□□ -0.65
CCT4-201ENST00000394440 LINC01546A6NGU7 62 aa10.96□□□□□ -0.65
CCT4-201ENST00000394440 PF4P02776 101 aa10.96□□□□□ -0.65
CCT4-201ENST00000394440 C14orf178Q8N769 122 aaPredicted RBP10.96□□□□□ -0.65
CCT4-201ENST00000394440 C19orf73Q9NVV2 129 aa10.96□□□□□ -0.65
CCT4-201ENST00000394440 TRGV11A0A075B6L2 103 aa10.96□□□□□ -0.66
CCT4-201ENST00000394440 A0A096LNJ9 63 aa10.96□□□□□ -0.66
CCT4-201ENST00000394440 TRAV26-2A0A0B4J265 109 aa10.96□□□□□ -0.66
CCT4-201ENST00000394440 CMC4P56277 68 aaPredicted RBP10.96□□□□□ -0.66
CCT4-201ENST00000394440 LINC00315P59091 139 aa10.96□□□□□ -0.66
CCT4-201ENST00000394440 C20orf144Q9BQM9 153 aa10.96□□□□□ -0.66
CCT4-201ENST00000394440 MAP1LC3AQ9H492 121 aa10.96□□□□□ -0.66
CCT4-201ENST00000394440 COTL1Q14019 142 aa10.95□□□□□ -0.66
CCT4-201ENST00000394440 CITED1Q99966 193 aa10.95□□□□□ -0.66
CCT4-201ENST00000394440 STHQ8IWL8 128 aa10.95□□□□□ -0.66
CCT4-201ENST00000394440 LINC00467Q9BRT7 94 aa10.95□□□□□ -0.66
CCT4-201ENST00000394440 IGLV2-18A0A075B6J9 118 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms