RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CSTL1Q9H114 145 aa9.07□□□□□ -0.96
SPTBN1-203ENST00000389980 ZNF256Q9Y2P7 627 aaPredicted RBP9.07□□□□□ -0.96
SPTBN1-203ENST00000389980 MUC21A0A0G2JKD1 596 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 MUC21A0A140T8X8 626 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 HLA-DQA1P01909 254 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 MUC21Q5SSG8 566 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 EBLN2Q6P2I7 272 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 APRG1Q8IVJ8 170 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 GFRA4Q9GZZ7 299 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 MAP6D1Q9H9H5 199 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 SIGLEC8Q9NYZ4 499 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 LENEPQ9Y5L5 61 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 IGKV3D-20A0A0C4DH25 116 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 K7ERU9 68 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 KRTAP24-1Q3LI83 254 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 BORCS7Q96B45 105 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 RCHY1Q96PM5 261 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 SPAG8Q99932 426 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 CITED1Q99966 193 aa9.06□□□□□ -0.96
SPTBN1-203ENST00000389980 M0R2Z0 102 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 ZNF324O75467 553 aaPredicted RBP9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 FOXI2Q6ZQN5 318 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 LINC00482Q8N8I6 264 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 TRAV12-2A0A075B6T6 113 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 TRAV9-2A0A087WT02 112 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 TRAV2A0A0B4J234 112 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 OR4C46A6NHA9 309 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 ARMS2P0C7Q2 107 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 AMTP48728 403 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 LINC01559Q495D7 138 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 OCIAD2Q56VL3 154 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 PRIMA1Q86XR5 153 aa9.05□□□□□ -0.96
SPTBN1-203ENST00000389980 TRAV25A0A0B4J276 109 aa9.04□□□□□ -0.96
SPTBN1-203ENST00000389980 A0A1B0GXF2 115 aa9.04□□□□□ -0.96
SPTBN1-203ENST00000389980 FAM231BA6NCW3 169 aa9.04□□□□□ -0.96
SPTBN1-203ENST00000389980 FXYD7P58549 80 aa9.04□□□□□ -0.96
SPTBN1-203ENST00000389980 ODF3L2Q3SX64 289 aa9.04□□□□□ -0.96
SPTBN1-203ENST00000389980 RASL11AQ6T310 242 aa9.04□□□□□ -0.96
SPTBN1-203ENST00000389980 LYZL1Q6UWQ5 148 aa9.04□□□□□ -0.96
SPTBN1-203ENST00000389980 CST9LQ9H4G1 147 aa9.04□□□□□ -0.96
SPTBN1-203ENST00000389980 COL6A5A8TX70 2615 aa9.04□□□□□ -0.96
SPTBN1-203ENST00000389980 IGLV1-51P01701 117 aa9.03□□□□□ -0.96
SPTBN1-203ENST00000389980 FOXA3P55318 350 aaPredicted RBP9.03□□□□□ -0.96
SPTBN1-203ENST00000389980 HBBP68871 147 aa9.03□□□□□ -0.96
SPTBN1-203ENST00000389980 SPINK13Q1W4C9 94 aa9.03□□□□□ -0.96
SPTBN1-203ENST00000389980 TRAV12-3A0A0B4J271 114 aa9.03□□□□□ -0.96
SPTBN1-203ENST00000389980 KLLNB2CW77 178 aa9.03□□□□□ -0.96
SPTBN1-203ENST00000389980 C3orf79P0CE67 100 aa9.03□□□□□ -0.96
SPTBN1-203ENST00000389980 RNF151Q2KHN1 245 aa9.03□□□□□ -0.96
SPTBN1-203ENST00000389980 TRAV21A0A0B4J279 112 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 RBMY1BA6NDE4 496 aaKnown RBP9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 RBMY1EA6NEQ0 496 aaKnown RBP9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 H3BMM0 161 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 RBMY1DP0C7P1 496 aaKnown RBP9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 PMCHP20382 165 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 HINT1P49773 126 aaPredicted RBP9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 VAMP3Q15836 100 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 AMTNQ6UX39 209 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 FER1L6-AS1Q8NA97 138 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 TRBV7-9A0A0J9YWB2 115 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 A0A1B0GUT8 65 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 DUSP14O95147 198 aaKnown RBP9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 HLA-DRB4P13762 266 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 Q6AWC8 147 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 ATP5L2Q7Z4Y8 100 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 NIT1Q86X76 327 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 FAM19A2Q8N3H0 131 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 C18orf32Q8TCD1 76 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 HLA-DRB4X5D2U9 266 aa9.02□□□□□ -0.97
SPTBN1-203ENST00000389980 PKD1L1Q8TDX9 2849 aa9.01□□□□□ -0.97
SPTBN1-203ENST00000389980 CBY3A6NI87 242 aa9.01□□□□□ -0.97
SPTBN1-203ENST00000389980 SPRY2O43597 315 aa9.01□□□□□ -0.97
SPTBN1-203ENST00000389980 CD7P09564 240 aa9.01□□□□□ -0.97
SPTBN1-203ENST00000389980 IGLC6P0CF74 106 aa9.01□□□□□ -0.97
SPTBN1-203ENST00000389980 LEPP41159 167 aa9.01□□□□□ -0.97
SPTBN1-203ENST00000389980 ANXA2RQ3ZCQ2 193 aa9.01□□□□□ -0.97
SPTBN1-203ENST00000389980 C12orf54Q6X4T0 127 aa9.01□□□□□ -0.97
SPTBN1-203ENST00000389980 ST20Q9HBF5 79 aa9.01□□□□□ -0.97
SPTBN1-203ENST00000389980 TMEM238C9JI98 176 aa9□□□□□ -0.97
SPTBN1-203ENST00000389980 ODF3Q96PU9 254 aa9□□□□□ -0.97
SPTBN1-203ENST00000389980 WFDC10AQ9H1F0 79 aa9□□□□□ -0.97
SPTBN1-203ENST00000389980 TIMM8BQ9Y5J9 83 aaPredicted RBP9□□□□□ -0.97
SPTBN1-203ENST00000389980 CMYA5Q8N3K9 4069 aa9□□□□□ -0.97
SPTBN1-203ENST00000389980 C7orf71A4D174 169 aa9□□□□□ -0.97
SPTBN1-203ENST00000389980 GNRH2O43555 120 aa9□□□□□ -0.97
SPTBN1-203ENST00000389980 NTF3P20783 257 aa9□□□□□ -0.97
SPTBN1-203ENST00000389980 MSRB1Q9NZV6 116 aa9□□□□□ -0.97
SPTBN1-203ENST00000389980 OR11H12B2RN74 326 aa8.99□□□□□ -0.97
SPTBN1-203ENST00000389980 DEFB125Q8N687 156 aa8.99□□□□□ -0.97
SPTBN1-203ENST00000389980 H3BVH4 76 aa8.99□□□□□ -0.97
SPTBN1-203ENST00000389980 RIGQ13278 110 aa8.99□□□□□ -0.97
SPTBN1-203ENST00000389980 RBMY1A1P0DJD3 496 aaKnown RBP8.98□□□□□ -0.97
SPTBN1-203ENST00000389980 RBMY1CP0DJD4 496 aa8.98□□□□□ -0.97
SPTBN1-203ENST00000389980 RBMY1FQ15415 496 aaKnown RBP8.98□□□□□ -0.97
SPTBN1-203ENST00000389980 TWIST1Q15672 202 aa8.98□□□□□ -0.97
SPTBN1-203ENST00000389980 RNASEKQ6P5S7 137 aaKnown RBP8.98□□□□□ -0.97
SPTBN1-203ENST00000389980 OR10AG1Q8NH19 301 aa8.98□□□□□ -0.97
SPTBN1-203ENST00000389980 MUC4Q99102 2169 aa8.98□□□□□ -0.97
SPTBN1-203ENST00000389980 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms