RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 PLXNB1O43157 2135 aa12.5□□□□□ -0.41
PTPRN2-201ENST00000389413 SPRY2O43597 315 aa12.5□□□□□ -0.41
PTPRN2-201ENST00000389413 ZFAND6Q6FIF0 208 aa12.5□□□□□ -0.41
PTPRN2-201ENST00000389413 LINC01619G3V211 115 aa12.5□□□□□ -0.41
PTPRN2-201ENST00000389413 H3BMG7 143 aa12.5□□□□□ -0.41
PTPRN2-201ENST00000389413 ZFP36P26651 326 aaKnown RBP12.5□□□□□ -0.41
PTPRN2-201ENST00000389413 ATP6V0BQ99437 205 aa12.5□□□□□ -0.41
PTPRN2-201ENST00000389413 PRIMA1Q86XR5 153 aa12.49□□□□□ -0.41
PTPRN2-201ENST00000389413 J3QQQ9 107 aa12.49□□□□□ -0.41
PTPRN2-201ENST00000389413 XCL2Q9UBD3 114 aa12.49□□□□□ -0.41
PTPRN2-201ENST00000389413 J3QLI3 93 aa12.49□□□□□ -0.41
PTPRN2-201ENST00000389413 ELANEP08246 267 aa12.49□□□□□ -0.41
PTPRN2-201ENST00000389413 MALP21145 153 aa12.49□□□□□ -0.41
PTPRN2-201ENST00000389413 NSUN5P1Q3KNT7 163 aa12.49□□□□□ -0.41
PTPRN2-201ENST00000389413 KIAA1549Q9HCM3 1950 aa12.48□□□□□ -0.41
PTPRN2-201ENST00000389413 C5orf56Q8N8D9 126 aa12.48□□□□□ -0.41
PTPRN2-201ENST00000389413 C1QTNF4Q9BXJ3 329 aa12.48□□□□□ -0.41
PTPRN2-201ENST00000389413 PTPRQQ9UMZ3 2332 aa12.48□□□□□ -0.41
PTPRN2-201ENST00000389413 CPAMD8Q8IZJ3 1885 aa12.48□□□□□ -0.41
PTPRN2-201ENST00000389413 TAX1BP3O14907 124 aa12.48□□□□□ -0.41
PTPRN2-201ENST00000389413 C9orf47Q6ZRZ4 202 aa12.48□□□□□ -0.41
PTPRN2-201ENST00000389413 TMEM86BQ8N661 226 aa12.48□□□□□ -0.41
PTPRN2-201ENST00000389413 TSSC4Q9Y5U2 329 aaPredicted RBP12.48□□□□□ -0.41
PTPRN2-201ENST00000389413 HTN3P15516 51 aa12.48□□□□□ -0.41
PTPRN2-201ENST00000389413 PRO1854Q9UHT4 67 aa12.48□□□□□ -0.41
PTPRN2-201ENST00000389413 IGHV4-61A0A0C4DH41 118 aa12.47□□□□□ -0.41
PTPRN2-201ENST00000389413 AMTNQ6UX39 209 aa12.47□□□□□ -0.41
PTPRN2-201ENST00000389413 SPATA12Q7Z6I5 190 aa12.47□□□□□ -0.41
PTPRN2-201ENST00000389413 RPL39LQ96EH5 51 aaKnown RBP12.47□□□□□ -0.41
PTPRN2-201ENST00000389413 SPINK8P0C7L1 97 aa12.47□□□□□ -0.41
PTPRN2-201ENST00000389413 BOD1L2Q8IYS8 172 aa12.47□□□□□ -0.41
PTPRN2-201ENST00000389413 CRPP02741 224 aa12.47□□□□□ -0.41
PTPRN2-201ENST00000389413 RPL35AP18077 110 aaKnown RBP12.47□□□□□ -0.41
PTPRN2-201ENST00000389413 CKS1BP61024 79 aa12.47□□□□□ -0.41
PTPRN2-201ENST00000389413 CRYGBP07316 175 aa12.46□□□□□ -0.41
PTPRN2-201ENST00000389413 SP5Q6BEB4 398 aaPredicted RBP12.46□□□□□ -0.41
PTPRN2-201ENST00000389413 IGHV3-16A0A0C4DH30 117 aa12.46□□□□□ -0.42
PTPRN2-201ENST00000389413 PPDPFLQ8WWR9 84 aa12.46□□□□□ -0.42
PTPRN2-201ENST00000389413 SIRPDQ9H106 197 aa12.46□□□□□ -0.42
PTPRN2-201ENST00000389413 COL5A1P20908 1838 aaPredicted RBP12.46□□□□□ -0.42
PTPRN2-201ENST00000389413 BLCAPP62952 87 aa12.45□□□□□ -0.42
PTPRN2-201ENST00000389413 AJUBAQ96IF1 538 aa12.45□□□□□ -0.42
PTPRN2-201ENST00000389413 RHOHQ15669 191 aa12.45□□□□□ -0.42
PTPRN2-201ENST00000389413 NDUFA12Q9UI09 145 aa12.45□□□□□ -0.42
PTPRN2-201ENST00000389413 IGHV4-38-2P0DP08 117 aa12.45□□□□□ -0.42
PTPRN2-201ENST00000389413 MYCNOSP40205 109 aa12.45□□□□□ -0.42
PTPRN2-201ENST00000389413 TRAV8-3A0A0A6YYJ7 113 aa12.45□□□□□ -0.42
PTPRN2-201ENST00000389413 FOXI2Q6ZQN5 318 aa12.45□□□□□ -0.42
PTPRN2-201ENST00000389413 IGHV4-59P01825 116 aa12.44□□□□□ -0.42
PTPRN2-201ENST00000389413 HIGD1BQ9P298 99 aa12.44□□□□□ -0.42
PTPRN2-201ENST00000389413 LEPROTO15243 131 aa12.44□□□□□ -0.42
PTPRN2-201ENST00000389413 PAX4O43316 350 aa12.44□□□□□ -0.42
PTPRN2-201ENST00000389413 DEFB112Q30KQ8 113 aa12.44□□□□□ -0.42
PTPRN2-201ENST00000389413 Q5PR19 223 aa12.44□□□□□ -0.42
PTPRN2-201ENST00000389413 ODF3BA8MYP8 253 aa12.44□□□□□ -0.42
PTPRN2-201ENST00000389413 ZNF625Q96I27 306 aaPredicted RBP12.44□□□□□ -0.42
PTPRN2-201ENST00000389413 RNASE8Q8TDE3 154 aaKnown RBP12.43□□□□□ -0.42
PTPRN2-201ENST00000389413 FGF6P10767 208 aa12.43□□□□□ -0.42
PTPRN2-201ENST00000389413 TTTY13Q9BZ97 58 aa12.43□□□□□ -0.42
PTPRN2-201ENST00000389413 FSTL3O95633 263 aa12.43□□□□□ -0.42
PTPRN2-201ENST00000389413 LOXL1Q08397 574 aaPredicted RBP12.43□□□□□ -0.42
PTPRN2-201ENST00000389413 ZNF80P51504 273 aaPredicted RBP12.43□□□□□ -0.42
PTPRN2-201ENST00000389413 ODF1Q14990 250 aa12.42□□□□□ -0.42
PTPRN2-201ENST00000389413 IGHV3-38A0A0C4DH36 116 aa12.42□□□□□ -0.42
PTPRN2-201ENST00000389413 IGLL5B9A064 214 aa12.42□□□□□ -0.42
PTPRN2-201ENST00000389413 FXYD2P54710 66 aa12.42□□□□□ -0.42
PTPRN2-201ENST00000389413 ZNRF2Q8NHG8 242 aa12.42□□□□□ -0.42
PTPRN2-201ENST00000389413 RANBP2P49792 3224 aaKnown RBP12.42□□□□□ -0.42
PTPRN2-201ENST00000389413 AZU1P20160 251 aa12.42□□□□□ -0.42
PTPRN2-201ENST00000389413 C6orf226Q5I0X4 101 aa12.42□□□□□ -0.42
PTPRN2-201ENST00000389413 SUMO4Q6EEV6 95 aa12.42□□□□□ -0.42
PTPRN2-201ENST00000389413 TRAV12-1A0A0B4J245 112 aa12.41□□□□□ -0.42
PTPRN2-201ENST00000389413 GAGE12JA6NER3 117 aa12.41□□□□□ -0.42
PTPRN2-201ENST00000389413 GAGE4Q13068 117 aa12.41□□□□□ -0.42
PTPRN2-201ENST00000389413 GAGE5Q13069 117 aa12.41□□□□□ -0.42
PTPRN2-201ENST00000389413 GAGE12HA6NDE8 117 aa12.41□□□□□ -0.42
PTPRN2-201ENST00000389413 HOXD3P31249 432 aaPredicted RBP12.41□□□□□ -0.42
PTPRN2-201ENST00000389413 CUL9Q8IWT3 2517 aa12.41□□□□□ -0.42
PTPRN2-201ENST00000389413 LGALS1P09382 135 aaKnown RBP12.4□□□□□ -0.42
PTPRN2-201ENST00000389413 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.42
PTPRN2-201ENST00000389413 C5orf42Q9H799 3197 aa12.4□□□□□ -0.42
PTPRN2-201ENST00000389413 ZFP2Q6ZN57 461 aa12.4□□□□□ -0.42
PTPRN2-201ENST00000389413 IGHV4-30-2A0A087WSY4 118 aa12.4□□□□□ -0.42
PTPRN2-201ENST00000389413 C11orf68Q9H3H3 251 aaKnown RBP12.4□□□□□ -0.42
PTPRN2-201ENST00000389413 PIEZO2Q9H5I5 2752 aa12.4□□□□□ -0.43
PTPRN2-201ENST00000389413 GATD1Q8NB37 220 aa12.39□□□□□ -0.43
PTPRN2-201ENST00000389413 LY6LH3BQJ8 138 aa12.39□□□□□ -0.43
PTPRN2-201ENST00000389413 C10orf105Q8TEF2 133 aa12.39□□□□□ -0.43
PTPRN2-201ENST00000389413 IGLC6P0CF74 106 aa12.39□□□□□ -0.43
PTPRN2-201ENST00000389413 MED14OSP0DP75 135 aa12.39□□□□□ -0.43
PTPRN2-201ENST00000389413 H3BMM0 161 aa12.38□□□□□ -0.43
PTPRN2-201ENST00000389413 SLC25A20O43772 301 aa12.38□□□□□ -0.43
PTPRN2-201ENST00000389413 UBE2WQ96B02 151 aa12.38□□□□□ -0.43
PTPRN2-201ENST00000389413 CACNA1AO00555 2505 aa12.38□□□□□ -0.43
PTPRN2-201ENST00000389413 K7EMT4 169 aa12.37□□□□□ -0.43
PTPRN2-201ENST00000389413 GHRHP01286 108 aa12.37□□□□□ -0.43
PTPRN2-201ENST00000389413 TOMM6Q96B49 74 aa12.37□□□□□ -0.43
PTPRN2-201ENST00000389413 Q96MF0 132 aa12.37□□□□□ -0.43
PTPRN2-201ENST00000389413 CCDC140Q96MF4 163 aa12.37□□□□□ -0.43
PTPRN2-201ENST00000389413 OVOL2Q9BRP0 275 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms