RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 AATFQ9NY61 560 aaKnown RBP eCLIP-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 MRPL36Q9P0J6 103 aaKnown RBP-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 ATXN10Q9UBB4 475 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 NAT8Q9UHE5 227 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 CHCHD2Q9Y6H1 151 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 C3P01024 1663 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 PPLO60437 1756 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 TGIF2-C20orf24A0A0A6YYL0 155 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 TRBV7-7A0A0K0K1E9 115 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 E7ESA3 106 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR7A10O76100 309 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 SERPINA1P01009 418 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 HLA-DQB2P05538 268 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 CCKP06307 115 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 SEC11BP0C7V7 166 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 SLC25A6P12236 298 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 PRDX2P32119 198 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 LEPP41159 167 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 EIF2B2P49770 351 aaKnown RBP-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 ACTR1AP61163 376 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 NCALDP61601 193 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 BLCAPP62952 87 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 HERVK_113P63121 156 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 RPL38P63173 70 aaKnown RBP-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 PRDX1Q06830 199 aaKnown RBP-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 HSP90AA5PQ58FG0 334 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 CLLU1Q5K131 121 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 TTC23Q5W5X9 447 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 MDP1Q86V88 176 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 NATD1Q8N6N6 113 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 CDRT4Q8N9R6 151 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 C2orf15Q8WU43 125 aaKnown RBP-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 RIT1Q92963 219 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 TCEAL3Q969E4 200 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 PACRGQ96M98 296 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 DEFB118Q96PH6 123 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 WFDC6Q9BQY6 131 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 MROQ9BYG7 248 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 PBOV1Q9GZY1 135 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 TOLLIPQ9H0E2 274 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 EXO5Q9H790 373 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 OSTCQ9NRP0 149 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 CHMP5Q9NZZ3 219 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 KAAG1Q9UBP8 84 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 VPS29Q9UBQ0 182 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 GHRLQ9UBU3 117 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 SNX6Q9UNH7 406 aa-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 INO80Q9ULG1 1556 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-540P-201ENST00000384622 CCDC18Q5T9S5 1454 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 IGHV2-70DA0A0C4DH43 119 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 A0A0J9YY10 115 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 A0A1B0GU69 56 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 GOLGA6L7A0A1B0GV03 622 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 TCRBV21S2A2A0A5A6 115 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 TRDCB7Z8K6 153 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 TMEM262E9PQX1 116 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 OTCP00480 354 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 IL1BP01584 269 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 TRBV12-3P01733 135 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 NQO2P16083 231 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 HMGB2P26583 209 aaKnown RBP-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 S100A2P29034 98 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 SLC1A1P43005 524 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 AP3S2P59780 193 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 ATP6V0D1P61421 351 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 BRMS1LQ5PSV4 323 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 MINOS1Q5TGZ0 78 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 HACD4Q5VWC8 232 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 DRAM2Q6UX65 266 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 RASSF6Q6ZTQ3 369 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 MBOAT2Q6ZWT7 520 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 HOOK3Q86VS8 718 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 MLKLQ8NB16 471 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR6N2Q8NGY6 317 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR5AK3PQ8NH89 298 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 OTOSQ8NHW6 89 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 COX7B2Q8TF08 81 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 AQP10Q96PS8 301 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 CHP1Q99653 195 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 SMIM2Q9BVW6 85 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 COPS7BQ9H9Q2 264 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 CRLF2Q9HC73 371 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 PXMP2Q9NR77 195 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 RGS18Q9NS28 235 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 ERG28Q9UKR5 140 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 SNX12Q9UMY4 172 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 MPC1Q9Y5U8 109 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 EVC2Q86UK5 1308 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 HFM1A2PYH4 1435 aa-2.25□□□□□ -2.77
RNU6-540P-201ENST00000384622 LTN1O94822 1766 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 CCDC88BA6NC98 1476 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 KDM5DQ9BY66 1539 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 A0A0A6YYD5 115 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 NSG1A0A0A6YYJ2 146 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 TRBV27A0A0K0K1C4 114 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 hADV38S2A0JD32 116 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 ANKRD20A5PA0PJZ0 165 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 KRBOX1C9JBD0 128 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 COPEO14579 308 aa-2.26□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms