RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 CDPF1Q6NVV7 123 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 GOLT1AQ6ZVE7 132 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 MAPKAPK5-AS1Q8N8E1 139 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 HSD17B11Q8NBQ5 300 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 OR10G9Q8NGN4 311 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 OR10G7Q8NGN6 311 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 SDF2L1Q9HCN8 221 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 TREM1Q9NP99 234 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 LY96Q9Y6Y9 160 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 DNAH5Q8TE73 4624 aa8.88□□□□□ -0.99
RPAIN-202ENST00000381208 K7EQD1 137 aa8.87□□□□□ -0.99
RPAIN-202ENST00000381208 K7EQM0 130 aa8.87□□□□□ -0.99
RPAIN-202ENST00000381208 MBP02144 154 aa8.87□□□□□ -0.99
RPAIN-202ENST00000381208 GYPEP15421 78 aa8.87□□□□□ -0.99
RPAIN-202ENST00000381208 EVI2AP22794 236 aa8.87□□□□□ -0.99
RPAIN-202ENST00000381208 Q6ZRN7 208 aaPredicted RBP8.87□□□□□ -0.99
RPAIN-202ENST00000381208 OR4C5Q8NGB2 326 aa8.87□□□□□ -0.99
RPAIN-202ENST00000381208 OR2G3Q8NGZ4 309 aa8.87□□□□□ -0.99
RPAIN-202ENST00000381208 ZNF479Q96JC4 524 aa8.87□□□□□ -0.99
RPAIN-202ENST00000381208 NAGKQ9UJ70 344 aa8.87□□□□□ -0.99
RPAIN-202ENST00000381208 RPH3ALQ9UNE2 315 aa8.87□□□□□ -0.99
RPAIN-202ENST00000381208 FBLL1A6NHQ2 334 aaKnown RBP8.86□□□□□ -0.99
RPAIN-202ENST00000381208 S100A6P06703 90 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 SFTA3P0C7M3 94 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 CDC34P49427 236 aaPredicted RBP8.86□□□□□ -0.99
RPAIN-202ENST00000381208 SERF2P84101 59 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 Q8N1X5 172 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 C10orf126Q8N4M7 172 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 PSMG3Q9BT73 122 aaPredicted RBP8.86□□□□□ -0.99
RPAIN-202ENST00000381208 IGHV3-16A0A0C4DH30 117 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 UMAD1C9J7I0 102 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 ATP6V0CP27449 155 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 TIRAPP58753 221 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 KRTAP10-2P60368 255 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 RAB2AP61019 212 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 C5orf17Q8NAS9 161 aa8.86□□□□□ -0.99
RPAIN-202ENST00000381208 STAG3L2P0CL84 134 aa8.85□□□□□ -0.99
RPAIN-202ENST00000381208 STAG3L3P0CL85 134 aa8.85□□□□□ -0.99
RPAIN-202ENST00000381208 DNAH10OSP0CZ25 163 aa8.85□□□□□ -0.99
RPAIN-202ENST00000381208 ARL14EPLP0DKL9 152 aa8.85□□□□□ -0.99
RPAIN-202ENST00000381208 SH3BGRL3Q9H299 93 aa8.85□□□□□ -0.99
RPAIN-202ENST00000381208 TMEM167BQ9NRX6 74 aa8.85□□□□□ -0.99
RPAIN-202ENST00000381208 GNRH2O43555 120 aa8.84□□□□□ -0.99
RPAIN-202ENST00000381208 TYMSP04818 313 aa8.84□□□□□ -0.99
RPAIN-202ENST00000381208 PFN1P07737 140 aaKnown RBP8.84□□□□□ -0.99
RPAIN-202ENST00000381208 DPPA3Q6W0C5 159 aa8.84□□□□□ -0.99
RPAIN-202ENST00000381208 KRTAP4-5Q9BYR2 181 aa8.84□□□□□ -0.99
RPAIN-202ENST00000381208 MRPL18Q9H0U6 180 aaKnown RBP8.84□□□□□ -0.99
RPAIN-202ENST00000381208 MSRB1Q9NZV6 116 aa8.84□□□□□ -0.99
RPAIN-202ENST00000381208 TRAV8-1A0A0A6YYK1 113 aa8.83□□□□□ -1
RPAIN-202ENST00000381208 F6UZH7 168 aa8.83□□□□□ -1
RPAIN-202ENST00000381208 TCRAP04437 139 aa8.83□□□□□ -1
RPAIN-202ENST00000381208 GATA1P15976 413 aaPredicted RBP8.83□□□□□ -1
RPAIN-202ENST00000381208 RAB24Q969Q5 203 aa8.83□□□□□ -1
RPAIN-202ENST00000381208 TVP23CQ96ET8 276 aa8.83□□□□□ -1
RPAIN-202ENST00000381208 PRADC1Q9BSG0 188 aa8.83□□□□□ -1
RPAIN-202ENST00000381208 ABCA13Q86UQ4 5058 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 HMGB3O15347 200 aaKnown RBP8.82□□□□□ -1
RPAIN-202ENST00000381208 EIF3GO75821 320 aaKnown RBP eCLIP8.82□□□□□ -1
RPAIN-202ENST00000381208 CXorf1O96002 111 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 GCHFRP30047 84 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 GNG5P63218 68 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 RHOHQ15669 191 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 ZNF876PQ49A33 203 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 SMUG1Q53HV7 270 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 SAPCD1Q5SSQ6 148 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 NHLRC2Q8NBF2 726 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 LYPD6BQ8NI32 183 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 PTH2Q96A98 100 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 ACTR3CQ9C0K3 210 aaPredicted RBP8.82□□□□□ -1
RPAIN-202ENST00000381208 SCRT2Q9NQ03 307 aa8.82□□□□□ -1
RPAIN-202ENST00000381208 A0A087WTM6 91 aa8.81□□□□□ -1
RPAIN-202ENST00000381208 CRYGDP07320 174 aa8.81□□□□□ -1
RPAIN-202ENST00000381208 PPT1P50897 306 aa8.81□□□□□ -1
RPAIN-202ENST00000381208 AKR1C8PQ5T2L2 129 aa8.81□□□□□ -1
RPAIN-202ENST00000381208 WFDC10BQ8IUB3 73 aa8.81□□□□□ -1
RPAIN-202ENST00000381208 CYB561D1Q8N8Q1 229 aa8.81□□□□□ -1
RPAIN-202ENST00000381208 TMEM75Q8N9X5 138 aa8.81□□□□□ -1
RPAIN-202ENST00000381208 PSG8Q9UQ74 426 aa8.81□□□□□ -1
RPAIN-202ENST00000381208 APOBP04114 4563 aaKnown RBP8.81□□□□□ -1
RPAIN-202ENST00000381208 TRAV8-6A0A0B4J262 113 aa8.8□□□□□ -1
RPAIN-202ENST00000381208 IGHV3-38A0A0C4DH36 116 aa8.8□□□□□ -1
RPAIN-202ENST00000381208 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
RPAIN-202ENST00000381208 GCGP01275 180 aa8.8□□□□□ -1
RPAIN-202ENST00000381208 SUMO1P63165 101 aaKnown RBP8.8□□□□□ -1
RPAIN-202ENST00000381208 FLI1Q01543 452 aaPredicted RBP8.8□□□□□ -1
RPAIN-202ENST00000381208 SMDT1Q9H4I9 107 aa8.8□□□□□ -1
RPAIN-202ENST00000381208 EPDR1Q9UM22 224 aa8.8□□□□□ -1
RPAIN-202ENST00000381208 A0A1W2PRE2 83 aa8.79□□□□□ -1
RPAIN-202ENST00000381208 RS1O15537 224 aa8.79□□□□□ -1
RPAIN-202ENST00000381208 MGST1P10620 155 aaKnown RBP8.79□□□□□ -1
RPAIN-202ENST00000381208 LINC01556Q5JQF7 62 aa8.79□□□□□ -1
RPAIN-202ENST00000381208 PIK3CD-AS1Q5SR53 167 aa8.79□□□□□ -1
RPAIN-202ENST00000381208 NKX6-2Q9C056 277 aaPredicted RBP8.79□□□□□ -1
RPAIN-202ENST00000381208 TMEM218A2RU14 115 aa8.78□□□□□ -1
RPAIN-202ENST00000381208 PEA15Q15121 130 aa8.78□□□□□ -1
RPAIN-202ENST00000381208 CFAP126Q5VTH2 177 aa8.78□□□□□ -1
RPAIN-202ENST00000381208 SGK494Q96LW2 274 aa8.78□□□□□ -1
RPAIN-202ENST00000381208 C9orf85Q96MD7 179 aa8.78□□□□□ -1
RPAIN-202ENST00000381208 TNFRSF18Q9Y5U5 241 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms