RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 C5orf56Q8N8D9 126 aa13.62□□□□□ -0.23
GNE-201ENST00000377902 ZNF815PA8K554 130 aa13.61□□□□□ -0.23
GNE-201ENST00000377902 WFDC12Q8WWY7 111 aa13.61□□□□□ -0.23
GNE-201ENST00000377902 MUC4Q99102 2169 aa13.61□□□□□ -0.23
GNE-201ENST00000377902 DUSP14O95147 198 aaKnown RBP13.61□□□□□ -0.23
GNE-201ENST00000377902 KLK9Q2XQG4 91 aa13.61□□□□□ -0.23
GNE-201ENST00000377902 DPH3P1Q9H4G8 78 aa13.61□□□□□ -0.23
GNE-201ENST00000377902 KLK9Q9UKQ9 250 aa13.61□□□□□ -0.23
GNE-201ENST00000377902 A0A1B0GWB2 263 aa13.6□□□□□ -0.23
GNE-201ENST00000377902 MRPL16Q9NX20 251 aaKnown RBP13.6□□□□□ -0.23
GNE-201ENST00000377902 LINC01549A6NIU2 74 aa13.6□□□□□ -0.23
GNE-201ENST00000377902 ARL3P36405 182 aa13.6□□□□□ -0.23
GNE-201ENST00000377902 SCGB1D4Q6XE38 83 aa13.6□□□□□ -0.23
GNE-201ENST00000377902 JPT2Q9H910 190 aa13.6□□□□□ -0.23
GNE-201ENST00000377902 IGHV3-11P01762 117 aa13.59□□□□□ -0.23
GNE-201ENST00000377902 CRYGDP07320 174 aa13.59□□□□□ -0.23
GNE-201ENST00000377902 SRD5A1P18405 259 aa13.59□□□□□ -0.23
GNE-201ENST00000377902 ASIPP42127 132 aa13.59□□□□□ -0.23
GNE-201ENST00000377902 ZFP2Q6ZN57 461 aa13.59□□□□□ -0.23
GNE-201ENST00000377902 SPOCK3Q9BQ16 436 aa13.59□□□□□ -0.23
GNE-201ENST00000377902 BPESC1Q9GZL8 116 aa13.59□□□□□ -0.23
GNE-201ENST00000377902 CRYBG3Q68DQ2 2970 aa13.58□□□□□ -0.23
GNE-201ENST00000377902 TRAV41A0A0B4J266 112 aa13.58□□□□□ -0.24
GNE-201ENST00000377902 TRAV21A0A0B4J279 112 aa13.58□□□□□ -0.24
GNE-201ENST00000377902 RNASE3P12724 160 aaKnown RBP13.58□□□□□ -0.24
GNE-201ENST00000377902 C9orf139Q6ZV77 190 aa13.58□□□□□ -0.24
GNE-201ENST00000377902 OR10J6PQ8NGY7 276 aa13.58□□□□□ -0.24
GNE-201ENST00000377902 C20orf78Q9BR46 151 aa13.58□□□□□ -0.24
GNE-201ENST00000377902 NPFFO15130 113 aa13.58□□□□□ -0.24
GNE-201ENST00000377902 SMCPP49901 116 aaPredicted RBP13.58□□□□□ -0.24
GNE-201ENST00000377902 SRSF9Q13242 221 aaKnown RBP eCLIP13.58□□□□□ -0.24
GNE-201ENST00000377902 TSHBP01222 138 aa13.57□□□□□ -0.24
GNE-201ENST00000377902 LINC00477Q96M19 166 aa13.57□□□□□ -0.24
GNE-201ENST00000377902 LOC107984156A0A0G2JMH3 177 aa13.57□□□□□ -0.24
GNE-201ENST00000377902 APOMO95445 188 aa13.57□□□□□ -0.24
GNE-201ENST00000377902 BRD3OSQ6XYD6 125 aa13.57□□□□□ -0.24
GNE-201ENST00000377902 ARL17AQ8IVW1 177 aa13.57□□□□□ -0.24
GNE-201ENST00000377902 UBTD1Q9HAC8 227 aa13.57□□□□□ -0.24
GNE-201ENST00000377902 C11orf86A6NJI1 115 aa13.56□□□□□ -0.24
GNE-201ENST00000377902 J3QR89 54 aa13.56□□□□□ -0.24
GNE-201ENST00000377902 SOCS3O14543 225 aa13.56□□□□□ -0.24
GNE-201ENST00000377902 COX6B1P14854 86 aa13.56□□□□□ -0.24
GNE-201ENST00000377902 EDN2P20800 178 aa13.56□□□□□ -0.24
GNE-201ENST00000377902 RPL39P62891 51 aaKnown RBP13.56□□□□□ -0.24
GNE-201ENST00000377902 SPATA25Q9BR10 227 aa13.56□□□□□ -0.24
GNE-201ENST00000377902 PTH2Q96A98 100 aa13.56□□□□□ -0.24
GNE-201ENST00000377902 PSMB2P49721 201 aa13.55□□□□□ -0.24
GNE-201ENST00000377902 LMO4P61968 165 aa13.55□□□□□ -0.24
GNE-201ENST00000377902 CLEC2AQ6UVW9 174 aa13.55□□□□□ -0.24
GNE-201ENST00000377902 NDUFS8O00217 210 aa13.55□□□□□ -0.24
GNE-201ENST00000377902 TSPAN13O95857 204 aa13.55□□□□□ -0.24
GNE-201ENST00000377902 A0A087WWL8 130 aa13.54□□□□□ -0.24
GNE-201ENST00000377902 Q6ZS46 218 aa13.54□□□□□ -0.24
GNE-201ENST00000377902 NFE4Q86UQ8 179 aa13.54□□□□□ -0.24
GNE-201ENST00000377902 ZNF418Q8TF45 676 aaPredicted RBP13.54□□□□□ -0.24
GNE-201ENST00000377902 TP53TG1Q9Y2A0 90 aa13.54□□□□□ -0.24
GNE-201ENST00000377902 LENEPQ9Y5L5 61 aa13.54□□□□□ -0.24
GNE-201ENST00000377902 HIVEP3Q5T1R4 2406 aa13.54□□□□□ -0.24
GNE-201ENST00000377902 IGLV4-69A0A075B6H9 119 aa13.54□□□□□ -0.24
GNE-201ENST00000377902 LINC01619G3V211 115 aa13.54□□□□□ -0.24
GNE-201ENST00000377902 TGFAP01135 160 aa13.54□□□□□ -0.24
GNE-201ENST00000377902 CIDEAO60543 219 aa13.53□□□□□ -0.24
GNE-201ENST00000377902 LINC00315P59091 139 aa13.53□□□□□ -0.24
GNE-201ENST00000377902 LY6EQ16553 131 aa13.53□□□□□ -0.24
GNE-201ENST00000377902 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
GNE-201ENST00000377902 ABCA2Q9BZC7 2435 aa13.52□□□□□ -0.24
GNE-201ENST00000377902 TSPEAR-AS2P59090 65 aa13.52□□□□□ -0.24
GNE-201ENST00000377902 C19orf54Q5BKX5 351 aa13.52□□□□□ -0.24
GNE-201ENST00000377902 OVOL1O14753 267 aa13.52□□□□□ -0.25
GNE-201ENST00000377902 UBE2D1P51668 147 aa13.52□□□□□ -0.25
GNE-201ENST00000377902 FOXI1Q12951 378 aa13.51□□□□□ -0.25
GNE-201ENST00000377902 FAM19A4Q96LR4 140 aa13.51□□□□□ -0.25
GNE-201ENST00000377902 CD7P09564 240 aa13.51□□□□□ -0.25
GNE-201ENST00000377902 MOB4Q9Y3A3 225 aa13.51□□□□□ -0.25
GNE-201ENST00000377902 KIF25-AS1Q9Y6Z4 181 aa13.51□□□□□ -0.25
GNE-201ENST00000377902 FAM223BA6NKX1 122 aa13.5□□□□□ -0.25
GNE-201ENST00000377902 FHL3Q13643 280 aa13.5□□□□□ -0.25
GNE-201ENST00000377902 FAM223AQ8IWN6 122 aa13.5□□□□□ -0.25
GNE-201ENST00000377902 SYT8Q8NBV8 401 aa13.5□□□□□ -0.25
GNE-201ENST00000377902 DLX4Q92988 240 aaPredicted RBP13.5□□□□□ -0.25
GNE-201ENST00000377902 A0A0J9YY99 117 aa13.5□□□□□ -0.25
GNE-201ENST00000377902 IGIPA6NJ69 53 aa13.5□□□□□ -0.25
GNE-201ENST00000377902 CELSR2Q9HCU4 2923 aa13.5□□□□□ -0.25
GNE-201ENST00000377902 F5H697 171 aa13.49□□□□□ -0.25
GNE-201ENST00000377902 SCGB1A1P11684 91 aa13.49□□□□□ -0.25
GNE-201ENST00000377902 SUMO4Q6EEV6 95 aa13.49□□□□□ -0.25
GNE-201ENST00000377902 OPRPNQ99935 248 aaPredicted RBP13.49□□□□□ -0.25
GNE-201ENST00000377902 TMEM170BQ5T4T1 132 aa13.49□□□□□ -0.25
GNE-201ENST00000377902 ZNRF2Q8NHG8 242 aa13.49□□□□□ -0.25
GNE-201ENST00000377902 RHPN1-AS1Q9BWJ2 59 aa13.49□□□□□ -0.25
GNE-201ENST00000377902 C1QTNF4Q9BXJ3 329 aa13.49□□□□□ -0.25
GNE-201ENST00000377902 NDUFA4O00483 81 aa13.48□□□□□ -0.25
GNE-201ENST00000377902 TMEM238LA0A1B0GVL6 79 aa13.48□□□□□ -0.25
GNE-201ENST00000377902 A6NJY4 79 aa13.48□□□□□ -0.25
GNE-201ENST00000377902 FAM74A4Q5TZK3 123 aa13.48□□□□□ -0.25
GNE-201ENST00000377902 NDUFA11Q86Y39 141 aa13.48□□□□□ -0.25
GNE-201ENST00000377902 ATP6V0BQ99437 205 aa13.48□□□□□ -0.25
GNE-201ENST00000377902 CDIP1Q9H305 208 aa13.47□□□□□ -0.25
GNE-201ENST00000377902 PF4V1P10720 104 aa13.47□□□□□ -0.25
GNE-201ENST00000377902 BLCAPP62952 87 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms