RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 RPL7P18124 248 aaKnown RBP9.88□□□□□ -0.83
MSH5-204ENST00000375755 TMEM78Q5T7P6 136 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 ZNF843Q8N446 348 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 C11orf21Q9P2W6 132 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 IGKV3D-20A0A0C4DH25 116 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 PRSS29PA6NIE9 313 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 PPDPFLQ8WWR9 84 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 SIRPDQ9H106 197 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 ABCA12Q86UK0 2595 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 TRBV20-1A0A075B6N2 111 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 IGHV3-23P01764 117 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 PLEKHB2Q96CS7 222 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 KLK15Q9H2R5 256 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 TENM4Q6N022 2769 aa9.88□□□□□ -0.83
MSH5-204ENST00000375755 TRAV12-1A0A0B4J245 112 aa9.87□□□□□ -0.83
MSH5-204ENST00000375755 UBE2D1P51668 147 aa9.87□□□□□ -0.83
MSH5-204ENST00000375755 IL17RELQ6ZVW7 336 aa9.87□□□□□ -0.83
MSH5-204ENST00000375755 IGHV3OR16-8A0A075B7F1 116 aa9.87□□□□□ -0.83
MSH5-204ENST00000375755 SCGB2A1O75556 95 aa9.87□□□□□ -0.83
MSH5-204ENST00000375755 TEN1Q86WV5 123 aa9.87□□□□□ -0.83
MSH5-204ENST00000375755 AJUBAQ96IF1 538 aa9.87□□□□□ -0.83
MSH5-204ENST00000375755 CCL19Q99731 98 aa9.87□□□□□ -0.83
MSH5-204ENST00000375755 ANKRD17O75179 2603 aaKnown RBP9.87□□□□□ -0.83
MSH5-204ENST00000375755 MFAP4P55083 255 aa9.86□□□□□ -0.83
MSH5-204ENST00000375755 UBE2D3P61077 147 aa9.86□□□□□ -0.83
MSH5-204ENST00000375755 UBE2D2P62837 147 aa9.86□□□□□ -0.83
MSH5-204ENST00000375755 FANCD2OSQ96PS1 177 aa9.86□□□□□ -0.83
MSH5-204ENST00000375755 PRADC1Q9BSG0 188 aa9.86□□□□□ -0.83
MSH5-204ENST00000375755 IGHV4-61A0A0C4DH41 118 aa9.86□□□□□ -0.83
MSH5-204ENST00000375755 A6NJY4 79 aa9.86□□□□□ -0.83
MSH5-204ENST00000375755 USP9YO00507 2555 aaPredicted RBP9.86□□□□□ -0.83
MSH5-204ENST00000375755 NDPQ00604 133 aa9.86□□□□□ -0.83
MSH5-204ENST00000375755 KIR2DL4Q99706 377 aa9.86□□□□□ -0.83
MSH5-204ENST00000375755 ZNF815PA8K554 130 aa9.85□□□□□ -0.83
MSH5-204ENST00000375755 NBR2O15453 112 aa9.85□□□□□ -0.83
MSH5-204ENST00000375755 C3orf56Q8N813 242 aa9.85□□□□□ -0.83
MSH5-204ENST00000375755 CHD6Q8TD26 2715 aa9.85□□□□□ -0.83
MSH5-204ENST00000375755 TRBV7-9A0A0J9YWB2 115 aa9.85□□□□□ -0.83
MSH5-204ENST00000375755 TCL1BO95988 128 aa9.85□□□□□ -0.83
MSH5-204ENST00000375755 RNF182Q8N6D2 247 aa9.85□□□□□ -0.83
MSH5-204ENST00000375755 NEXN-AS1Q8NBZ9 246 aa9.85□□□□□ -0.83
MSH5-204ENST00000375755 SCGB3A1Q96QR1 104 aa9.85□□□□□ -0.83
MSH5-204ENST00000375755 IGLV11-55A0A075B6I3 123 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 IGHV7-4-1A0A0J9YVY3 117 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 H3BVH4 76 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 CD7P09564 240 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 SRSF9Q13242 221 aaKnown RBP eCLIP9.84□□□□□ -0.83
MSH5-204ENST00000375755 SCGB1D4Q6XE38 83 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 IGHV4-30-2A0A087WSY4 118 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 Q6ZQT7 251 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 SMIM2Q9BVW6 85 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 IGHV3-35A0A0C4DH35 117 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 ZNF688P0C7X2 276 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 SLC25A16P16260 332 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 SAA4P35542 130 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 GAGE5Q13069 117 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 GAGE6Q13070 117 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 C21orf62Q9NYP8 219 aa9.84□□□□□ -0.83
MSH5-204ENST00000375755 PTPN13Q12923 2485 aa9.83□□□□□ -0.84
MSH5-204ENST00000375755 CUBNO60494 3623 aa9.83□□□□□ -0.84
MSH5-204ENST00000375755 KLHL30-AS1Q8NEE0 82 aa9.83□□□□□ -0.84
MSH5-204ENST00000375755 RNF5Q99942 180 aa9.83□□□□□ -0.84
MSH5-204ENST00000375755 CLEC3BP05452 202 aa9.83□□□□□ -0.84
MSH5-204ENST00000375755 COX6B1P14854 86 aa9.83□□□□□ -0.84
MSH5-204ENST00000375755 ZFAND6Q6FIF0 208 aa9.83□□□□□ -0.84
MSH5-204ENST00000375755 BRD3OSQ6XYD6 125 aa9.83□□□□□ -0.84
MSH5-204ENST00000375755 RASL10AQ92737 203 aa9.83□□□□□ -0.84
MSH5-204ENST00000375755 NDUFA11Q86Y39 141 aa9.82□□□□□ -0.84
MSH5-204ENST00000375755 SBSPONQ8IVN8 264 aa9.82□□□□□ -0.84
MSH5-204ENST00000375755 ANKRD29Q8N6D5 301 aa9.82□□□□□ -0.84
MSH5-204ENST00000375755 TOMM6Q96B49 74 aa9.82□□□□□ -0.84
MSH5-204ENST00000375755 A8MWV9 139 aa9.82□□□□□ -0.84
MSH5-204ENST00000375755 NHLRC4P0CG21 123 aaPredicted RBP9.82□□□□□ -0.84
MSH5-204ENST00000375755 ATP5J2P56134 94 aa9.82□□□□□ -0.84
MSH5-204ENST00000375755 C1orf122Q6ZSJ8 110 aa9.82□□□□□ -0.84
MSH5-204ENST00000375755 NPBQ8NG41 125 aa9.82□□□□□ -0.84
MSH5-204ENST00000375755 BAALCQ8WXS3 180 aa9.81□□□□□ -0.84
MSH5-204ENST00000375755 AGPAT4-IT1Q9H0P7 198 aa9.81□□□□□ -0.84
MSH5-204ENST00000375755 CSPG4Q6UVK1 2322 aa9.81□□□□□ -0.84
MSH5-204ENST00000375755 MXRA5Q9NR99 2828 aa9.81□□□□□ -0.84
MSH5-204ENST00000375755 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.81□□□□□ -0.841e-7■■■■□ 22.7
MSH5-204ENST00000375755 CENPVL3A0A0U1RRI6 287 aa9.81□□□□□ -0.84
MSH5-204ENST00000375755 CTSGP08311 255 aa9.81□□□□□ -0.84
MSH5-204ENST00000375755 SPANXN1Q5VSR9 72 aa9.81□□□□□ -0.84
MSH5-204ENST00000375755 TEX29Q8N6K0 151 aa9.81□□□□□ -0.84
MSH5-204ENST00000375755 CITED1Q99966 193 aa9.81□□□□□ -0.84
MSH5-204ENST00000375755 TMEM95Q3KNT9 176 aa9.81□□□□□ -0.84
MSH5-204ENST00000375755 Q8N6K4 173 aa9.81□□□□□ -0.84
MSH5-204ENST00000375755 APCP25054 2843 aa9.8□□□□□ -0.84
MSH5-204ENST00000375755 C10orf105Q8TEF2 133 aa9.8□□□□□ -0.84
MSH5-204ENST00000375755 VCX2Q9H322 139 aa9.8□□□□□ -0.84
MSH5-204ENST00000375755 UBE2E1P51965 193 aa9.8□□□□□ -0.84
MSH5-204ENST00000375755 ORMDL2Q53FV1 153 aa9.8□□□□□ -0.84
MSH5-204ENST00000375755 LYRM7Q5U5X0 104 aa9.8□□□□□ -0.84
MSH5-204ENST00000375755 TMEM219Q86XT9 240 aa9.8□□□□□ -0.84
MSH5-204ENST00000375755 MAPK1IP1LQ8NDC0 245 aa9.8□□□□□ -0.84
MSH5-204ENST00000375755 HIF1ANQ9NWT6 349 aa9.8□□□□□ -0.84
MSH5-204ENST00000375755 CCDC179H3BU77 68 aa9.79□□□□□ -0.84
MSH5-204ENST00000375755 SPRY2O43597 315 aa9.79□□□□□ -0.84
MSH5-204ENST00000375755 BRI3O95415 125 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms