RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 J3QQQ9 107 aa15.2■□□□□ 0.02
TGFBR1-201ENST00000374990 K7EP13 123 aa15.2■□□□□ 0.02
TGFBR1-201ENST00000374990 AZU1P20160 251 aa15.2■□□□□ 0.02
TGFBR1-201ENST00000374990 Q8NA96 180 aa15.2■□□□□ 0.02
TGFBR1-201ENST00000374990 NDUFA12Q9UI09 145 aa15.2■□□□□ 0.02
TGFBR1-201ENST00000374990 IGHV4-59P01825 116 aa15.2■□□□□ 0.02
TGFBR1-201ENST00000374990 DEFB125Q8N687 156 aa15.2■□□□□ 0.02
TGFBR1-201ENST00000374990 PRSS29PA6NIE9 313 aa15.2■□□□□ 0.02
TGFBR1-201ENST00000374990 EIF4EBP1Q13541 118 aaPredicted RBP15.2■□□□□ 0.02
TGFBR1-201ENST00000374990 GAGE12JA6NER3 117 aa15.19■□□□□ 0.02
TGFBR1-201ENST00000374990 GAGE4Q13068 117 aa15.19■□□□□ 0.02
TGFBR1-201ENST00000374990 GAGE5Q13069 117 aa15.19■□□□□ 0.02
TGFBR1-201ENST00000374990 A0A1W2PPM0 123 aa15.19■□□□□ 0.02
TGFBR1-201ENST00000374990 GATD1Q8NB37 220 aa15.19■□□□□ 0.02
TGFBR1-201ENST00000374990 ZNRF2Q8NHG8 242 aa15.19■□□□□ 0.02
TGFBR1-201ENST00000374990 CEND1Q8N111 149 aa15.19■□□□□ 0.02
TGFBR1-201ENST00000374990 ZNF503Q96F45 646 aa15.19■□□□□ 0.02
TGFBR1-201ENST00000374990 ETDBQ3ZM63 59 aa15.18■□□□□ 0.02
TGFBR1-201ENST00000374990 GNRH2O43555 120 aa15.18■□□□□ 0.02
TGFBR1-201ENST00000374990 PRO1854Q9UHT4 67 aa15.18■□□□□ 0.02
TGFBR1-201ENST00000374990 IGKV1D-37A0A075B6S9 117 aa15.18■□□□□ 0.02
TGFBR1-201ENST00000374990 C5orf56Q8N8D9 126 aa15.18■□□□□ 0.02
TGFBR1-201ENST00000374990 GTSF1LQ9H1H1 148 aa15.18■□□□□ 0.02
TGFBR1-201ENST00000374990 FSTL3O95633 263 aa15.18■□□□□ 0.02
TGFBR1-201ENST00000374990 HOXD3P31249 432 aaPredicted RBP15.18■□□□□ 0.02
TGFBR1-201ENST00000374990 C19orf71A6NCJ1 209 aa15.18■□□□□ 0.02
TGFBR1-201ENST00000374990 C10orf105Q8TEF2 133 aa15.18■□□□□ 0.02
TGFBR1-201ENST00000374990 FANCD2OSQ96PS1 177 aa15.18■□□□□ 0.02
TGFBR1-201ENST00000374990 TMEM243Q9BU79 118 aa15.17■□□□□ 0.02
TGFBR1-201ENST00000374990 AJUBAQ96IF1 538 aa15.17■□□□□ 0.02
TGFBR1-201ENST00000374990 IGHV3-16A0A0C4DH30 117 aa15.16■□□□□ 0.02
TGFBR1-201ENST00000374990 CTRLP40313 264 aa15.16■□□□□ 0.02
TGFBR1-201ENST00000374990 MSRB1Q9NZV6 116 aa15.16■□□□□ 0.02
TGFBR1-201ENST00000374990 BLCAPP62952 87 aa15.16■□□□□ 0.02
TGFBR1-201ENST00000374990 TRAV8-3A0A0A6YYJ7 113 aa15.16■□□□□ 0.02
TGFBR1-201ENST00000374990 TDRG1Q3Y452 100 aa15.16■□□□□ 0.02
TGFBR1-201ENST00000374990 K7EMT4 169 aa15.15■□□□□ 0.02
TGFBR1-201ENST00000374990 C9orf47Q6ZRZ4 202 aa15.15■□□□□ 0.02
TGFBR1-201ENST00000374990 ZNF625Q96I27 306 aaPredicted RBP15.15■□□□□ 0.02
TGFBR1-201ENST00000374990 GATA1P15976 413 aaPredicted RBP15.15■□□□□ 0.02
TGFBR1-201ENST00000374990 PPDPFLQ8WWR9 84 aa15.14■□□□□ 0.01
TGFBR1-201ENST00000374990 IGHV4-30-2A0A087WSY4 118 aa15.14■□□□□ 0.01
TGFBR1-201ENST00000374990 IGHV4-38-2P0DP08 117 aa15.14■□□□□ 0.01
TGFBR1-201ENST00000374990 PCP2Q8IVA1 136 aa15.14■□□□□ 0.01
TGFBR1-201ENST00000374990 DNAJC30Q96LL9 226 aa15.14■□□□□ 0.01
TGFBR1-201ENST00000374990 SIRPDQ9H106 197 aa15.14■□□□□ 0.01
TGFBR1-201ENST00000374990 SORL1Q92673 2214 aa15.13■□□□□ 0.01
TGFBR1-201ENST00000374990 ZFP36P26651 326 aaKnown RBP15.13■□□□□ 0.01
TGFBR1-201ENST00000374990 LINC00173Q6ZV60 143 aa15.13■□□□□ 0.01
TGFBR1-201ENST00000374990 RNF152Q8N8N0 203 aa15.13■□□□□ 0.01
TGFBR1-201ENST00000374990 HERVK_113P63121 156 aa15.12■□□□□ 0.01
TGFBR1-201ENST00000374990 ANKRD39Q53RE8 183 aa15.12■□□□□ 0.01
TGFBR1-201ENST00000374990 SPAG8Q99932 426 aaPredicted RBP15.12■□□□□ 0.01
TGFBR1-201ENST00000374990 IGHG2P01859 326 aa15.12■□□□□ 0.01
TGFBR1-201ENST00000374990 C12orf74Q32Q52 190 aa15.12■□□□□ 0.01
TGFBR1-201ENST00000374990 GAGE7O76087 117 aa15.12■□□□□ 0.01
TGFBR1-201ENST00000374990 GAGE12FP0CL80 117 aa15.12■□□□□ 0.01
TGFBR1-201ENST00000374990 GAGE12GP0CL81 117 aa15.12■□□□□ 0.01
TGFBR1-201ENST00000374990 GAGE12IP0CL82 117 aa15.12■□□□□ 0.01
TGFBR1-201ENST00000374990 FRMD6-AS1P0C7T7 363 aa15.11■□□□□ 0.01
TGFBR1-201ENST00000374990 C11orf68Q9H3H3 251 aaKnown RBP15.11■□□□□ 0.01
TGFBR1-201ENST00000374990 NACAE9PAV3 2078 aa15.11■□□□□ 0.01
TGFBR1-201ENST00000374990 MED14OSP0DP75 135 aa15.11■□□□□ 0.01
TGFBR1-201ENST00000374990 TNRC6AQ8NDV7 1962 aaKnown RBP15.11■□□□□ 0.01
TGFBR1-201ENST00000374990 A0A1B0GXF2 115 aa15.11■□□□□ 0.01
TGFBR1-201ENST00000374990 PRAC2D3DTV9 90 aa15.11■□□□□ 0.01
TGFBR1-201ENST00000374990 INAFM2P0DMQ5 153 aa15.11■□□□□ 0.01
TGFBR1-201ENST00000374990 FGF6P10767 208 aa15.11■□□□□ 0.01
TGFBR1-201ENST00000374990 TMEM89A2RUT3 159 aa15.1■□□□□ 0.01
TGFBR1-201ENST00000374990 IGLV2-8P01709 118 aa15.1■□□□□ 0.01
TGFBR1-201ENST00000374990 MLST8Q9BVC4 326 aa15.1■□□□□ 0.01
TGFBR1-201ENST00000374990 SPINK8P0C7L1 97 aa15.1■□□□□ 0.01
TGFBR1-201ENST00000374990 IGHV3-38A0A0C4DH36 116 aa15.09■□□□□ 0.01
TGFBR1-201ENST00000374990 GPHB5Q86YW7 130 aa15.09■□□□□ 0.01
TGFBR1-201ENST00000374990 SPANXA1Q9NS26 97 aa15.08■□□□□ 0.01
TGFBR1-201ENST00000374990 UTF1Q5T230 341 aa15.08■□□□□ 0
TGFBR1-201ENST00000374990 CEP295Q9C0D2 2601 aa15.08■□□□□ 0
TGFBR1-201ENST00000374990 VWC2LB2RUY7 222 aa15.08■□□□□ 0
TGFBR1-201ENST00000374990 SCRT2Q9NQ03 307 aa15.07■□□□□ 0
TGFBR1-201ENST00000374990 DAD1P61803 113 aa15.07■□□□□ 0
TGFBR1-201ENST00000374990 HIVEP3Q5T1R4 2406 aa15.07■□□□□ 0
TGFBR1-201ENST00000374990 ODF3BA8MYP8 253 aa15.07■□□□□ 0
TGFBR1-201ENST00000374990 SPATA12Q7Z6I5 190 aa15.07■□□□□ 0
TGFBR1-201ENST00000374990 ABCA2Q9BZC7 2435 aa15.07■□□□□ 0
TGFBR1-201ENST00000374990 H3BMG7 143 aa15.07■□□□□ 0
TGFBR1-201ENST00000374990 C1orf229Q6ZS94 237 aaPredicted RBP15.07■□□□□ 0
TGFBR1-201ENST00000374990 C22orf34Q6ZV56 151 aa15.07■□□□□ 0
TGFBR1-201ENST00000374990 HIGD1BQ9P298 99 aa15.06■□□□□ 0
TGFBR1-201ENST00000374990 H3BMM0 161 aa15.06■□□□□ 0
TGFBR1-201ENST00000374990 UBE2WQ96B02 151 aa15.06■□□□□ 0
TGFBR1-201ENST00000374990 MBD6Q96DN6 1003 aa15.06■□□□□ 0
TGFBR1-201ENST00000374990 RPL39LQ96EH5 51 aaKnown RBP15.06■□□□□ 0
TGFBR1-201ENST00000374990 CFHR3Q02985 330 aa15.06■□□□□ 0
TGFBR1-201ENST00000374990 LAMTOR3Q9UHA4 124 aa15.06■□□□□ 0
TGFBR1-201ENST00000374990 TRAV12-1A0A0B4J245 112 aa15.05■□□□□ -0
TGFBR1-201ENST00000374990 U3KQE9 123 aa15.05■□□□□ -0
TGFBR1-201ENST00000374990 J3QKU1 62 aa15.05■□□□□ -0
TGFBR1-201ENST00000374990 K7ERJ3 54 aa15.05■□□□□ -0
TGFBR1-201ENST00000374990 SUMO4Q6EEV6 95 aa15.05■□□□□ -0
TGFBR1-201ENST00000374990 ZFP2Q6ZN57 461 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms