RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 ZNF469Q96JG9 3925 aaPredicted RBP8.31□□□□□ -1.08
CXCL12-203ENST00000374429 C9orf118A6NHY6 69 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 COX19Q49B96 90 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 PSMG4Q5JS54 123 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 SPXQ9BT56 116 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 TRAV12-3A0A0B4J271 114 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 HOXA3O43365 443 aaPredicted RBP8.3□□□□□ -1.08
CXCL12-203ENST00000374429 GNRH2O43555 120 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 TMEM97Q5BJF2 176 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 C18orf65Q6ZTR6 163 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 JMJD8Q96S16 334 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 IGHV1-24A0A0C4DH33 117 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 WI2-2373I1.2A0A1W2PRP0 233 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 INS-IGF2F8WCM5 200 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 K7EMI3 77 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 SPATA12Q7Z6I5 190 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 AJUBAQ96IF1 538 aa8.3□□□□□ -1.08
CXCL12-203ENST00000374429 FABP5P3A8MUU1 101 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 TSPAN13O95857 204 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 EMP1P54849 157 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 C14orf178Q8N769 122 aaPredicted RBP8.29□□□□□ -1.08
CXCL12-203ENST00000374429 TRBV9A0A0B4J1U6 114 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 ETDBQ3ZM63 59 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 UFSP1Q6NVU6 142 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 TMEM70Q9BUB7 260 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 TTTY13Q9BZ97 58 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 A0A087WWL8 130 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 NPYP01303 97 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 FCER1GP30273 86 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 PIFOQ8TCI5 191 aa8.29□□□□□ -1.08
CXCL12-203ENST00000374429 SEC11AP67812 179 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 OR10J6PQ8NGY7 276 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 MAP1LC3CQ9BXW4 147 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 TMEM191AQ9H0A3 160 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 KLK9Q9UKQ9 250 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 KLF12Q9Y4X4 402 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 TNFRSF18Q9Y5U5 241 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 C19orf71A6NCJ1 209 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 CACNG7P62955 275 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 C20orf173Q96LM9 149 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 SH2D6Q7Z4S9 175 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 Q8N6K4 173 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 JPT2Q9H910 190 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 PHLDA3Q9Y5J5 127 aa8.28□□□□□ -1.08
CXCL12-203ENST00000374429 OR10J3Q5JRS4 329 aa8.27□□□□□ -1.09
CXCL12-203ENST00000374429 ZNF843Q8N446 348 aa8.27□□□□□ -1.09
CXCL12-203ENST00000374429 ZNF418Q8TF45 676 aaPredicted RBP8.27□□□□□ -1.09
CXCL12-203ENST00000374429 C11orf21Q9P2W6 132 aa8.27□□□□□ -1.09
CXCL12-203ENST00000374429 MRPL51Q4U2R6 128 aaKnown RBP8.27□□□□□ -1.09
CXCL12-203ENST00000374429 FAM231DQ6ZW35 169 aa8.27□□□□□ -1.09
CXCL12-203ENST00000374429 WFDC11Q8NEX6 87 aa8.27□□□□□ -1.09
CXCL12-203ENST00000374429 TMEM14CQ9P0S9 112 aa8.27□□□□□ -1.09
CXCL12-203ENST00000374429 CYSLTR1Q9Y271 337 aa8.26□□□□□ -1.09
CXCL12-203ENST00000374429 M0QXV9 152 aa8.26□□□□□ -1.09
CXCL12-203ENST00000374429 SPINK13Q1W4C9 94 aa8.26□□□□□ -1.09
CXCL12-203ENST00000374429 ORMDL3Q8N138 153 aa8.26□□□□□ -1.09
CXCL12-203ENST00000374429 NBEAL1Q6ZS30 2694 aa8.26□□□□□ -1.09
CXCL12-203ENST00000374429 CLPSL1A2RUU4 121 aa8.26□□□□□ -1.09
CXCL12-203ENST00000374429 KNCNA6PVL3 124 aa8.26□□□□□ -1.09
CXCL12-203ENST00000374429 OOSP1A8MZH6 123 aa8.26□□□□□ -1.09
CXCL12-203ENST00000374429 SRSF1Q07955 248 aaKnown RBP eCLIP8.26□□□□□ -1.09
CXCL12-203ENST00000374429 URB1-AS1Q96HZ7 61 aa8.26□□□□□ -1.09
CXCL12-203ENST00000374429 A0A1W2PPM0 123 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 H3BRM9 83 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 CD7P09564 240 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 LEPP41159 167 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 PRR9Q5T870 116 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 SAMD5Q5TGI4 173 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 PRSS22Q9GZN4 317 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 ZFAND3Q9H8U3 227 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 SIGLEC8Q9NYZ4 499 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 A4D1N5 150 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 IGHG4P01861 327 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 WFDC2Q14508 124 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 VCX2Q9H322 139 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 TMEM160Q9NX00 188 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 SLURP1P55000 103 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 C1QTNF4Q9BXJ3 329 aa8.25□□□□□ -1.09
CXCL12-203ENST00000374429 TRAV9-1A0A075B6T8 112 aa8.24□□□□□ -1.09
CXCL12-203ENST00000374429 TRBV7-1A0A0A6YYK4 115 aa8.24□□□□□ -1.09
CXCL12-203ENST00000374429 MRPS12O15235 138 aaKnown RBP8.24□□□□□ -1.09
CXCL12-203ENST00000374429 SPAG8Q99932 426 aaPredicted RBP8.24□□□□□ -1.09
CXCL12-203ENST00000374429 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
CXCL12-203ENST00000374429 F8P00451 2351 aa8.24□□□□□ -1.09
CXCL12-203ENST00000374429 ZNF256Q9Y2P7 627 aaPredicted RBP8.24□□□□□ -1.09
CXCL12-203ENST00000374429 MAST4O15021 2626 aa8.24□□□□□ -1.09
CXCL12-203ENST00000374429 IGKV3D-20A0A0C4DH25 116 aa8.24□□□□□ -1.09
CXCL12-203ENST00000374429 SYS1-DBNDD2H3BUS1 97 aa8.24□□□□□ -1.09
CXCL12-203ENST00000374429 SMR3AQ99954 134 aa8.24□□□□□ -1.09
CXCL12-203ENST00000374429 LINC01356Q8N9X3 169 aa8.23□□□□□ -1.09
CXCL12-203ENST00000374429 SYT8Q8NBV8 401 aa8.23□□□□□ -1.09
CXCL12-203ENST00000374429 SFTA2Q6UW10 78 aa8.23□□□□□ -1.09
CXCL12-203ENST00000374429 TRAV8-2A0A0B4J237 113 aa8.23□□□□□ -1.09
CXCL12-203ENST00000374429 A0A1B0GXF2 115 aa8.23□□□□□ -1.09
CXCL12-203ENST00000374429 SPATA25Q9BR10 227 aa8.23□□□□□ -1.09
CXCL12-203ENST00000374429 C20orf78Q9BR46 151 aa8.23□□□□□ -1.09
CXCL12-203ENST00000374429 DKK2Q9UBU2 259 aa8.23□□□□□ -1.09
CXCL12-203ENST00000374429 A0A1B0GWB2 263 aa8.22□□□□□ -1.09
CXCL12-203ENST00000374429 MT-ATP8P03928 68 aa8.22□□□□□ -1.09
CXCL12-203ENST00000374429 ZC2HC1BQ5TFG8 222 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms