RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ASIPP42127 132 aa18.64■□□□□ 0.58
CTSA-203ENST00000372459 FHL3Q13643 280 aa18.64■□□□□ 0.58
CTSA-203ENST00000372459 SPANXN1Q5VSR9 72 aa18.64■□□□□ 0.58
CTSA-203ENST00000372459 S100A4P26447 101 aaKnown RBP18.64■□□□□ 0.57
CTSA-203ENST00000372459 CKS2P33552 79 aa18.64■□□□□ 0.57
CTSA-203ENST00000372459 CITED2Q99967 270 aaPredicted RBP18.64■□□□□ 0.57
CTSA-203ENST00000372459 OR4C46A6NHA9 309 aa18.63■□□□□ 0.57
CTSA-203ENST00000372459 CCL24O00175 119 aa18.63■□□□□ 0.57
CTSA-203ENST00000372459 NDUFA7O95182 113 aa18.63■□□□□ 0.57
CTSA-203ENST00000372459 SMIM15Q7Z3B0 74 aa18.63■□□□□ 0.57
CTSA-203ENST00000372459 RNF185Q96GF1 192 aa18.63■□□□□ 0.57
CTSA-203ENST00000372459 TMEM61Q8N0U2 210 aa18.62■□□□□ 0.57
CTSA-203ENST00000372459 ST20Q9HBF5 79 aa18.62■□□□□ 0.57
CTSA-203ENST00000372459 MED14OSP0DP75 135 aa18.62■□□□□ 0.57
CTSA-203ENST00000372459 HSPB8Q9UJY1 196 aa18.62■□□□□ 0.57
CTSA-203ENST00000372459 C7orf71A4D174 169 aa18.61■□□□□ 0.57
CTSA-203ENST00000372459 PPBPP02775 128 aa18.61■□□□□ 0.57
CTSA-203ENST00000372459 PET117Q6UWS5 81 aa18.61■□□□□ 0.57
CTSA-203ENST00000372459 PRSS3P2Q8NHM4 247 aa18.61■□□□□ 0.57
CTSA-203ENST00000372459 TIMM8BQ9Y5J9 83 aaPredicted RBP18.61■□□□□ 0.57
CTSA-203ENST00000372459 IGKV3-20P01619 116 aa18.61■□□□□ 0.57
CTSA-203ENST00000372459 DEFB114Q30KQ6 69 aa18.61■□□□□ 0.57
CTSA-203ENST00000372459 LINC00173Q6ZV60 143 aa18.61■□□□□ 0.57
CTSA-203ENST00000372459 MAP1LC3CQ9BXW4 147 aa18.61■□□□□ 0.57
CTSA-203ENST00000372459 HIVEP2P31629 2446 aa18.6■□□□□ 0.57
CTSA-203ENST00000372459 FAM159AQ6UWV7 190 aa18.6■□□□□ 0.57
CTSA-203ENST00000372459 CDKN1BP46527 198 aa18.59■□□□□ 0.57
CTSA-203ENST00000372459 FA2HQ7L5A8 372 aa18.59■□□□□ 0.57
CTSA-203ENST00000372459 STPG4Q8N801 248 aa18.59■□□□□ 0.57
CTSA-203ENST00000372459 GNRH2O43555 120 aa18.59■□□□□ 0.57
CTSA-203ENST00000372459 EVI2AP22794 236 aa18.59■□□□□ 0.57
CTSA-203ENST00000372459 AP5S1Q9NUS5 200 aa18.59■□□□□ 0.57
CTSA-203ENST00000372459 GOLT1BQ9Y3E0 138 aa18.59■□□□□ 0.57
CTSA-203ENST00000372459 TRAV12-3A0A0B4J271 114 aa18.58■□□□□ 0.56
CTSA-203ENST00000372459 SMKR1H3BMG3 65 aa18.58■□□□□ 0.56
CTSA-203ENST00000372459 DEFB131AP59861 70 aa18.58■□□□□ 0.56
CTSA-203ENST00000372459 PHLDA3Q9Y5J5 127 aa18.58■□□□□ 0.56
CTSA-203ENST00000372459 MTORP42345 2549 aa18.58■□□□□ 0.56
CTSA-203ENST00000372459 NCR2O95944 276 aa18.57■□□□□ 0.56
CTSA-203ENST00000372459 SCRT2Q9NQ03 307 aa18.57■□□□□ 0.56
CTSA-203ENST00000372459 CD300EQ496F6 205 aaPredicted RBP18.57■□□□□ 0.56
CTSA-203ENST00000372459 SIGLEC8Q9NYZ4 499 aa18.57■□□□□ 0.56
CTSA-203ENST00000372459 NPYP01303 97 aa18.56■□□□□ 0.56
CTSA-203ENST00000372459 IFI27P40305 119 aaPredicted RBP18.56■□□□□ 0.56
CTSA-203ENST00000372459 NF1P21359 2839 aa18.55■□□□□ 0.56
CTSA-203ENST00000372459 LOC389332A0A1B0GUA5 103 aa18.55■□□□□ 0.56
CTSA-203ENST00000372459 SPINK13Q1W4C9 94 aa18.55■□□□□ 0.56
CTSA-203ENST00000372459 SPAG8Q99932 426 aaPredicted RBP18.55■□□□□ 0.56
CTSA-203ENST00000372459 TRAV12-2A0A075B6T6 113 aa18.55■□□□□ 0.56
CTSA-203ENST00000372459 M0R381 172 aa18.55■□□□□ 0.56
CTSA-203ENST00000372459 TCF21O43680 179 aa18.55■□□□□ 0.56
CTSA-203ENST00000372459 RNASE3P12724 160 aaKnown RBP18.55■□□□□ 0.56
CTSA-203ENST00000372459 PROK1P58294 105 aa18.55■□□□□ 0.56
CTSA-203ENST00000372459 TRAV25A0A0B4J276 109 aa18.54■□□□□ 0.56
CTSA-203ENST00000372459 HLA-DRB4P13762 266 aa18.54■□□□□ 0.56
CTSA-203ENST00000372459 AMTNQ6UX39 209 aa18.54■□□□□ 0.56
CTSA-203ENST00000372459 HLA-DRB4X5D2U9 266 aa18.54■□□□□ 0.56
CTSA-203ENST00000372459 KNCNA6PVL3 124 aa18.53■□□□□ 0.56
CTSA-203ENST00000372459 LINC01545Q5VT33 79 aa18.53■□□□□ 0.56
CTSA-203ENST00000372459 HSBP1L1C9JCN9 74 aa18.53■□□□□ 0.56
CTSA-203ENST00000372459 NPSP0C0P6 89 aa18.53■□□□□ 0.56
CTSA-203ENST00000372459 INAFM1C9JVW0 142 aa18.52■□□□□ 0.56
CTSA-203ENST00000372459 MAP1LC3AQ9H492 121 aa18.52■□□□□ 0.56
CTSA-203ENST00000372459 MAP6D1Q9H9H5 199 aa18.52■□□□□ 0.56
CTSA-203ENST00000372459 A8MTW9 85 aa18.51■□□□□ 0.55
CTSA-203ENST00000372459 CD7P09564 240 aa18.51■□□□□ 0.55
CTSA-203ENST00000372459 HINT1P49773 126 aaPredicted RBP18.51■□□□□ 0.55
CTSA-203ENST00000372459 H3BMM0 161 aa18.51■□□□□ 0.55
CTSA-203ENST00000372459 TNFRSF6BO95407 300 aa18.51■□□□□ 0.55
CTSA-203ENST00000372459 ZNF747Q9BV97 191 aa18.51■□□□□ 0.55
CTSA-203ENST00000372459 NOTCH2Q04721 2471 aa18.51■□□□□ 0.55
CTSA-203ENST00000372459 AGRNO00468 2067 aa18.5■□□□□ 0.55
CTSA-203ENST00000372459 hDV102S1A0JD36 115 aa18.5■□□□□ 0.55
CTSA-203ENST00000372459 SPRY2O43597 315 aa18.5■□□□□ 0.55
CTSA-203ENST00000372459 OTOGQ6ZRI0 2925 aa18.5■□□□□ 0.55
CTSA-203ENST00000372459 GAS8-AS1O95177 125 aa18.5■□□□□ 0.55
CTSA-203ENST00000372459 FOSL1P15407 271 aa18.5■□□□□ 0.55
CTSA-203ENST00000372459 ORAOV1Q8WV07 137 aa18.5■□□□□ 0.55
CTSA-203ENST00000372459 ZNF256Q9Y2P7 627 aaPredicted RBP18.5■□□□□ 0.55
CTSA-203ENST00000372459 DPH3P1Q9H4G8 78 aa18.49■□□□□ 0.55
CTSA-203ENST00000372459 SORL1Q92673 2214 aa18.49■□□□□ 0.55
CTSA-203ENST00000372459 IGHV1OR15-1A0A075B7D0 117 aa18.48■□□□□ 0.55
CTSA-203ENST00000372459 NXPH4O95158 308 aa18.48■□□□□ 0.55
CTSA-203ENST00000372459 SLC25A34Q6PIV7 304 aa18.48■□□□□ 0.55
CTSA-203ENST00000372459 MRAP2Q96G30 205 aa18.48■□□□□ 0.55
CTSA-203ENST00000372459 OR2K2Q8NGT1 345 aa18.48■□□□□ 0.55
CTSA-203ENST00000372459 AP1S3Q96PC3 154 aa18.48■□□□□ 0.55
CTSA-203ENST00000372459 GATA1P15976 413 aaPredicted RBP18.47■□□□□ 0.55
CTSA-203ENST00000372459 NXT2Q9NPJ8 142 aaKnown RBP18.46■□□□□ 0.55
CTSA-203ENST00000372459 IGHV3-16A0A0C4DH30 117 aa18.46■□□□□ 0.55
CTSA-203ENST00000372459 ADARB2-AS1A8MUL3 147 aa18.46■□□□□ 0.55
CTSA-203ENST00000372459 A0A096LNJ9 63 aa18.45■□□□□ 0.54
CTSA-203ENST00000372459 TRAV26-2A0A0B4J265 109 aa18.45■□□□□ 0.54
CTSA-203ENST00000372459 FXYD7P58549 80 aa18.45■□□□□ 0.54
CTSA-203ENST00000372459 NSUN5P1Q3KNT7 163 aa18.45■□□□□ 0.54
CTSA-203ENST00000372459 C14orf178Q8N769 122 aaPredicted RBP18.45■□□□□ 0.54
CTSA-203ENST00000372459 Q8N1Y9 231 aa18.44■□□□□ 0.54
CTSA-203ENST00000372459 NRACQ8N912 160 aa18.44■□□□□ 0.54
CTSA-203ENST00000372459 C9orf85Q96MD7 179 aa18.44■□□□□ 0.54
CTSA-203ENST00000372459 COX11Q9Y6N1 276 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms