RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 CACNG7P62955 275 aa14.92□□□□□ -0.02
LHX3-202ENST00000371748 KIR3DS1Q14943 382 aa14.92□□□□□ -0.02
LHX3-202ENST00000371748 Q8N2B8 174 aa14.92□□□□□ -0.02
LHX3-202ENST00000371748 RNF152Q8N8N0 203 aa14.92□□□□□ -0.02
LHX3-202ENST00000371748 MYO9AB2RTY4 2548 aa14.91□□□□□ -0.02
LHX3-202ENST00000371748 AKAP9Q99996 3911 aa14.91□□□□□ -0.02
LHX3-202ENST00000371748 CKS2P33552 79 aa14.91□□□□□ -0.02
LHX3-202ENST00000371748 ID1P41134 155 aa14.91□□□□□ -0.02
LHX3-202ENST00000371748 DEFB136Q30KP8 78 aa14.91□□□□□ -0.02
LHX3-202ENST00000371748 FAM19A4Q96LR4 140 aa14.91□□□□□ -0.02
LHX3-202ENST00000371748 HBDP02042 147 aa14.91□□□□□ -0.02
LHX3-202ENST00000371748 RNF185Q96GF1 192 aa14.91□□□□□ -0.02
LHX3-202ENST00000371748 RNASE4P34096 147 aaKnown RBP14.9□□□□□ -0.02
LHX3-202ENST00000371748 TCTAP57738 103 aa14.9□□□□□ -0.02
LHX3-202ENST00000371748 UFSP1Q6NVU6 142 aa14.9□□□□□ -0.02
LHX3-202ENST00000371748 CUBNO60494 3623 aa14.9□□□□□ -0.02
LHX3-202ENST00000371748 GAGE10A6NGK3 116 aa14.9□□□□□ -0.02
LHX3-202ENST00000371748 H3BVH4 76 aa14.9□□□□□ -0.02
LHX3-202ENST00000371748 TRAV21A0A0B4J279 112 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 NPYP01303 97 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 ZNF688P0C7X2 276 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 JMJD8Q96S16 334 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 ITPR2Q14571 2701 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 C9orf118A6NHY6 69 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 H3BRM9 83 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 LGALS9O00182 355 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 GAS8-AS1O95177 125 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 HIST2H2BDQ6DRA6 164 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 ADAMTSL5Q6ZMM2 481 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 WFDC12Q8WWY7 111 aa14.89□□□□□ -0.03
LHX3-202ENST00000371748 SLURP1P55000 103 aa14.88□□□□□ -0.03
LHX3-202ENST00000371748 IFI27L1Q96BM0 104 aa14.88□□□□□ -0.03
LHX3-202ENST00000371748 K7ERU9 68 aa14.88□□□□□ -0.03
LHX3-202ENST00000371748 EVI2AP22794 236 aa14.88□□□□□ -0.03
LHX3-202ENST00000371748 PSMG4Q5JS54 123 aa14.88□□□□□ -0.03
LHX3-202ENST00000371748 A6NDN8 102 aa14.87□□□□□ -0.03
LHX3-202ENST00000371748 OR9G4Q8NGQ1 327 aa14.87□□□□□ -0.03
LHX3-202ENST00000371748 SIVA1O15304 175 aa14.87□□□□□ -0.03
LHX3-202ENST00000371748 SPRY2O43597 315 aa14.87□□□□□ -0.03
LHX3-202ENST00000371748 ANXA2RQ3ZCQ2 193 aa14.87□□□□□ -0.03
LHX3-202ENST00000371748 SPANXN1Q5VSR9 72 aa14.87□□□□□ -0.03
LHX3-202ENST00000371748 SAMD13Q5VXD3 122 aa14.87□□□□□ -0.03
LHX3-202ENST00000371748 DNAJC9-AS1A6NH13 148 aa14.86□□□□□ -0.03
LHX3-202ENST00000371748 HSD52Q0P140 79 aa14.86□□□□□ -0.03
LHX3-202ENST00000371748 TCTEX1D4Q5JR98 221 aa14.86□□□□□ -0.03
LHX3-202ENST00000371748 KHDC1LQ5JSQ8 128 aa14.86□□□□□ -0.03
LHX3-202ENST00000371748 PCP2Q8IVA1 136 aa14.86□□□□□ -0.03
LHX3-202ENST00000371748 APRG1Q8IVJ8 170 aa14.86□□□□□ -0.03
LHX3-202ENST00000371748 DUX3Q96PT4 197 aa14.86□□□□□ -0.03
LHX3-202ENST00000371748 H3BUT2 72 aa14.85□□□□□ -0.03
LHX3-202ENST00000371748 KRTAP1-1Q07627 177 aa14.85□□□□□ -0.03
LHX3-202ENST00000371748 TMEM86BQ8N661 226 aa14.85□□□□□ -0.03
LHX3-202ENST00000371748 ACANP16112 2415 aa14.85□□□□□ -0.03
LHX3-202ENST00000371748 SAP30O75446 220 aa14.85□□□□□ -0.03
LHX3-202ENST00000371748 Q6ZSV7 163 aa14.85□□□□□ -0.03
LHX3-202ENST00000371748 SMIM15Q7Z3B0 74 aa14.85□□□□□ -0.03
LHX3-202ENST00000371748 TEX29Q8N6K0 151 aa14.85□□□□□ -0.03
LHX3-202ENST00000371748 DKK2Q9UBU2 259 aa14.85□□□□□ -0.03
LHX3-202ENST00000371748 K7EQG2 157 aa14.84□□□□□ -0.03
LHX3-202ENST00000371748 GTF2H5Q6ZYL4 71 aa14.84□□□□□ -0.03
LHX3-202ENST00000371748 NAA38Q9BRA0 125 aaKnown RBP14.84□□□□□ -0.03
LHX3-202ENST00000371748 TRBV7-9A0A0J9YWB2 115 aa14.84□□□□□ -0.03
LHX3-202ENST00000371748 GATA1P15976 413 aaPredicted RBP14.84□□□□□ -0.03
LHX3-202ENST00000371748 OR11H1Q8NG94 326 aa14.84□□□□□ -0.03
LHX3-202ENST00000371748 AP1S3Q96PC3 154 aa14.84□□□□□ -0.03
LHX3-202ENST00000371748 AGRNO00468 2067 aa14.84□□□□□ -0.03
LHX3-202ENST00000371748 SORL1Q92673 2214 aa14.83□□□□□ -0.03
LHX3-202ENST00000371748 S100A4P26447 101 aaKnown RBP14.83□□□□□ -0.03
LHX3-202ENST00000371748 SNRPD3P62318 126 aaKnown RBP14.83□□□□□ -0.03
LHX3-202ENST00000371748 ESM1Q9NQ30 184 aa14.83□□□□□ -0.03
LHX3-202ENST00000371748 GNRH2O43555 120 aa14.83□□□□□ -0.04
LHX3-202ENST00000371748 NMUP48645 174 aa14.83□□□□□ -0.04
LHX3-202ENST00000371748 CSTL1Q9H114 145 aa14.83□□□□□ -0.04
LHX3-202ENST00000371748 YAE1D1Q9NRH1 226 aa14.83□□□□□ -0.04
LHX3-202ENST00000371748 IGHV4-4A0A075B6R2 117 aa14.82□□□□□ -0.04
LHX3-202ENST00000371748 KLLNB2CW77 178 aa14.82□□□□□ -0.04
LHX3-202ENST00000371748 K7EP34 96 aa14.82□□□□□ -0.04
LHX3-202ENST00000371748 IGKV3-20P01619 116 aa14.82□□□□□ -0.04
LHX3-202ENST00000371748 ASIPP42127 132 aa14.82□□□□□ -0.04
LHX3-202ENST00000371748 LINC01619G3V211 115 aa14.82□□□□□ -0.04
LHX3-202ENST00000371748 M0R381 172 aa14.81□□□□□ -0.04
LHX3-202ENST00000371748 TNFRSF6BO95407 300 aa14.81□□□□□ -0.04
LHX3-202ENST00000371748 FOXC2Q99958 501 aa14.81□□□□□ -0.04
LHX3-202ENST00000371748 UNC79Q9P2D8 2635 aa14.81□□□□□ -0.04
LHX3-202ENST00000371748 NF1P21359 2839 aa14.81□□□□□ -0.04
LHX3-202ENST00000371748 TRAV26-2A0A0B4J265 109 aa14.81□□□□□ -0.04
LHX3-202ENST00000371748 C4orf3Q8WVX3 66 aa14.81□□□□□ -0.04
LHX3-202ENST00000371748 RAB37Q96AX2 223 aa14.81□□□□□ -0.04
LHX3-202ENST00000371748 C18orf15Q96N68 181 aa14.81□□□□□ -0.04
LHX3-202ENST00000371748 MAP1LC3AQ9H492 121 aa14.81□□□□□ -0.04
LHX3-202ENST00000371748 A0A0J9YX75 114 aa14.8□□□□□ -0.04
LHX3-202ENST00000371748 LINC01546A6NGU7 62 aa14.8□□□□□ -0.04
LHX3-202ENST00000371748 KLHL30-AS1Q8NEE0 82 aa14.8□□□□□ -0.04
LHX3-202ENST00000371748 OR2K2Q8NGT1 345 aa14.8□□□□□ -0.04
LHX3-202ENST00000371748 ANK3Q12955 4377 aaKnown RBP14.79□□□□□ -0.04
LHX3-202ENST00000371748 TRAV12-3A0A0B4J271 114 aa14.79□□□□□ -0.04
LHX3-202ENST00000371748 HHLA3Q9XRX5 114 aa14.79□□□□□ -0.04
LHX3-202ENST00000371748 PHLDA3Q9Y5J5 127 aa14.79□□□□□ -0.04
LHX3-202ENST00000371748 IGKV2D-26A0A0A0MRZ7 120 aa14.78□□□□□ -0.04
LHX3-202ENST00000371748 RNASE3P12724 160 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms