RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 ZNF580Q9UK33 172 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 TRAV17A0A0B4J275 112 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 RAX2Q96IS3 184 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 IGHV3OR16-13A0A075B7E8 117 aa8.8□□□□□ -1
SMARCA1-201ENST00000371121 IGHV3-74A0A0B4J1X5 117 aa8.8□□□□□ -1
SMARCA1-201ENST00000371121 IGHV3-33P01772 117 aa8.8□□□□□ -1
SMARCA1-201ENST00000371121 ASCL5Q7RTU5 278 aa8.8□□□□□ -1
SMARCA1-201ENST00000371121 RALYQ9UKM9 306 aaKnown RBP8.8□□□□□ -1
SMARCA1-201ENST00000371121 RPL39P62891 51 aaKnown RBP8.8□□□□□ -1
SMARCA1-201ENST00000371121 SRSF9Q13242 221 aaKnown RBP eCLIP8.8□□□□□ -1
SMARCA1-201ENST00000371121 FAM159AQ6UWV7 190 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 SCGB1D4Q6XE38 83 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 SMIM20Q8N5G0 67 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 SLC50A1Q9BRV3 221 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 TRIOBPQ9H2D6 2365 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 KIF25-AS1Q9Y6Z4 181 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 CNOT1A5YKK6 2376 aaKnown RBP8.79□□□□□ -1
SMARCA1-201ENST00000371121 C9JAW5 83 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 E7EQL1 145 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 ORMDL2Q53FV1 153 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 C9orf47Q6ZRZ4 202 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 Q8N6K4 173 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 POM121L12Q8N7R1 296 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 PCNX1Q96RV3 2341 aa8.79□□□□□ -1
SMARCA1-201ENST00000371121 PLA2G2CQ5R387 149 aa8.78□□□□□ -1
SMARCA1-201ENST00000371121 CCDC140Q96MF4 163 aa8.78□□□□□ -1
SMARCA1-201ENST00000371121 PRO1854Q9UHT4 67 aa8.78□□□□□ -1
SMARCA1-201ENST00000371121 A0A0G2JNJ9 132 aa8.78□□□□□ -1
SMARCA1-201ENST00000371121 Q9UFV3 132 aa8.78□□□□□ -1
SMARCA1-201ENST00000371121 A4D1N5 150 aa8.78□□□□□ -1
SMARCA1-201ENST00000371121 SPANXN1Q5VSR9 72 aa8.78□□□□□ -1
SMARCA1-201ENST00000371121 ZFAND2AQ8N6M9 145 aa8.78□□□□□ -1
SMARCA1-201ENST00000371121 LY6G5BQ8NDX9 201 aa8.77□□□□□ -1
SMARCA1-201ENST00000371121 NTN5Q8WTR8 489 aaPredicted RBP8.77□□□□□ -1
SMARCA1-201ENST00000371121 IGHV3-49A0A0A0MS15 119 aa8.77□□□□□ -1.01
SMARCA1-201ENST00000371121 GAGE12JA6NER3 117 aa8.77□□□□□ -1.01
SMARCA1-201ENST00000371121 ODF3BA8MYP8 253 aa8.77□□□□□ -1.01
SMARCA1-201ENST00000371121 GAGE7O76087 117 aa8.77□□□□□ -1.01
SMARCA1-201ENST00000371121 GAGE12FP0CL80 117 aa8.77□□□□□ -1.01
SMARCA1-201ENST00000371121 GAGE12GP0CL81 117 aa8.77□□□□□ -1.01
SMARCA1-201ENST00000371121 GAGE12IP0CL82 117 aa8.77□□□□□ -1.01
SMARCA1-201ENST00000371121 GAGE4Q13068 117 aa8.77□□□□□ -1.01
SMARCA1-201ENST00000371121 IGHV7-81A0A0B4J1V7 117 aa8.77□□□□□ -1.01
SMARCA1-201ENST00000371121 RNASE3P12724 160 aaKnown RBP8.77□□□□□ -1.01
SMARCA1-201ENST00000371121 MDFICQ9P1T7 246 aa8.77□□□□□ -1.01
SMARCA1-201ENST00000371121 APC2O95996 2303 aa8.76□□□□□ -1.01
SMARCA1-201ENST00000371121 M0R381 172 aa8.76□□□□□ -1.01
SMARCA1-201ENST00000371121 ITLN2Q8WWU7 325 aaPredicted RBP8.76□□□□□ -1.01
SMARCA1-201ENST00000371121 FAM104AQ969W3 186 aa8.76□□□□□ -1.01
SMARCA1-201ENST00000371121 RPL13AP40429 203 aaKnown RBP8.76□□□□□ -1.01
SMARCA1-201ENST00000371121 Q6Q795 121 aa8.76□□□□□ -1.01
SMARCA1-201ENST00000371121 Q6ZSV7 163 aa8.76□□□□□ -1.01
SMARCA1-201ENST00000371121 LITAFQ99732 161 aa8.76□□□□□ -1.01
SMARCA1-201ENST00000371121 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
SMARCA1-201ENST00000371121 TNFRSF18Q9Y5U5 241 aa8.76□□□□□ -1.01
SMARCA1-201ENST00000371121 CEP250Q9BV73 2442 aa8.75□□□□□ -1.01
SMARCA1-201ENST00000371121 IFITM1P13164 125 aa8.75□□□□□ -1.01
SMARCA1-201ENST00000371121 ASIPP42127 132 aa8.75□□□□□ -1.01
SMARCA1-201ENST00000371121 JPT2Q9H910 190 aa8.75□□□□□ -1.01
SMARCA1-201ENST00000371121 TP53TG1Q9Y2A0 90 aa8.75□□□□□ -1.01
SMARCA1-201ENST00000371121 ZNF876PQ49A33 203 aa8.75□□□□□ -1.01
SMARCA1-201ENST00000371121 FAM19A4Q96LR4 140 aa8.75□□□□□ -1.01
SMARCA1-201ENST00000371121 PRO3102Q9H379 93 aa8.75□□□□□ -1.01
SMARCA1-201ENST00000371121 TMEM262E9PQX1 116 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 P0DMU3 169 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 FAM231AP0DMU4 169 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 FAM231CP0DMU5 169 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 GAGE2BQ13066 116 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 KLK9Q2XQG4 91 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 GAGE2EQ4V326 116 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 LINC01587Q99440 93 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 GAGE2DQ9UEU5 116 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 KLK9Q9UKQ9 250 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 GNRH2O43555 120 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 POLR2KP53803 58 aaKnown RBP8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 C3orf56Q8N813 242 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 U3KQE9 123 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 J3KRW8 73 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 TRIAP1O43715 76 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 LY6HO94772 140 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 CLEC3BP05452 202 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 C15orf32Q32M92 178 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 TMEM95Q3KNT9 176 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 WNK2Q9Y3S1 2297 aa8.74□□□□□ -1.01
SMARCA1-201ENST00000371121 MUSTN1Q8IVN3 82 aa8.73□□□□□ -1.01
SMARCA1-201ENST00000371121 DEFB109BQ30KR1 87 aa8.73□□□□□ -1.01
SMARCA1-201ENST00000371121 C1orf122Q6ZSJ8 110 aa8.73□□□□□ -1.01
SMARCA1-201ENST00000371121 DPH3P1Q9H4G8 78 aa8.73□□□□□ -1.01
SMARCA1-201ENST00000371121 H7C423 109 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 J3QQQ9 107 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 LGALS9O00182 355 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 LINC01620Q4KN68 170 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 ABCA4P78363 2273 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 SCGB1C2P0DMR2 95 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 TTC32Q5I0X7 151 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 C15orf53Q8NAA6 179 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 CHCHD5Q9BSY4 110 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 PPDPFQ9H3Y8 114 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 DPM3Q9P2X0 92 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 TPRP12270 2363 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms