RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 CRIP1P50238 77 aa12.88□□□□□ -0.35
CHTOP-202ENST00000368687 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
CHTOP-202ENST00000368687 SYT8Q8NBV8 401 aa12.88□□□□□ -0.35
CHTOP-202ENST00000368687 PCNPQ8WW12 178 aaKnown RBP12.88□□□□□ -0.35
CHTOP-202ENST00000368687 ZNF479Q96JC4 524 aa12.88□□□□□ -0.35
CHTOP-202ENST00000368687 CXCL1P09341 107 aa12.87□□□□□ -0.35
CHTOP-202ENST00000368687 SH2D6Q7Z4S9 175 aa12.87□□□□□ -0.35
CHTOP-202ENST00000368687 BIN3Q9NQY0 253 aa12.87□□□□□ -0.35
CHTOP-202ENST00000368687 A0A096LPF7 62 aa12.86□□□□□ -0.35
CHTOP-202ENST00000368687 A8MWV9 139 aa12.86□□□□□ -0.35
CHTOP-202ENST00000368687 M0R036 132 aa12.86□□□□□ -0.35
CHTOP-202ENST00000368687 SFTA3P0C7M3 94 aa12.86□□□□□ -0.35
CHTOP-202ENST00000368687 NKX2-5P52952 324 aaPredicted RBP12.86□□□□□ -0.35
CHTOP-202ENST00000368687 ZNF506Q5JVG8 444 aa12.86□□□□□ -0.35
CHTOP-202ENST00000368687 UPK3BQ9BT76 320 aa12.86□□□□□ -0.35
CHTOP-202ENST00000368687 LINC00588Q9Y4M8 146 aa12.86□□□□□ -0.35
CHTOP-202ENST00000368687 RS1O15537 224 aa12.85□□□□□ -0.35
CHTOP-202ENST00000368687 MED14OSP0DP75 135 aa12.85□□□□□ -0.35
CHTOP-202ENST00000368687 GNG4P50150 75 aa12.85□□□□□ -0.35
CHTOP-202ENST00000368687 NHLRC2Q8NBF2 726 aa12.85□□□□□ -0.35
CHTOP-202ENST00000368687 LYPD6BQ8NI32 183 aa12.85□□□□□ -0.35
CHTOP-202ENST00000368687 H3BVH4 76 aa12.84□□□□□ -0.35
CHTOP-202ENST00000368687 SRIP30626 198 aa12.84□□□□□ -0.35
CHTOP-202ENST00000368687 CENPWQ5EE01 88 aa12.84□□□□□ -0.35
CHTOP-202ENST00000368687 SOHLH1Q5JUK2 328 aa12.84□□□□□ -0.35
CHTOP-202ENST00000368687 CFAP126Q5VTH2 177 aa12.84□□□□□ -0.35
CHTOP-202ENST00000368687 ZFP2Q6ZN57 461 aa12.84□□□□□ -0.35
CHTOP-202ENST00000368687 ZNRF2Q8NHG8 242 aa12.84□□□□□ -0.35
CHTOP-202ENST00000368687 MED9Q9NWA0 146 aa12.84□□□□□ -0.35
CHTOP-202ENST00000368687 MRPS16Q9Y3D3 137 aaKnown RBP12.84□□□□□ -0.35
CHTOP-202ENST00000368687 PHLDA3Q9Y5J5 127 aa12.84□□□□□ -0.35
CHTOP-202ENST00000368687 PGPEP1LA6NFU8 196 aa12.83□□□□□ -0.36
CHTOP-202ENST00000368687 ARMS2P0C7Q2 107 aa12.83□□□□□ -0.36
CHTOP-202ENST00000368687 MGST1P10620 155 aaKnown RBP12.83□□□□□ -0.36
CHTOP-202ENST00000368687 GATA1P15976 413 aaPredicted RBP12.83□□□□□ -0.36
CHTOP-202ENST00000368687 NEGR1Q7Z3B1 354 aa12.83□□□□□ -0.36
CHTOP-202ENST00000368687 PRADC1Q9BSG0 188 aa12.83□□□□□ -0.36
CHTOP-202ENST00000368687 DERL1Q9BUN8 251 aa12.83□□□□□ -0.36
CHTOP-202ENST00000368687 TRBV6-4A0A1B0GX49 114 aa12.82□□□□□ -0.36
CHTOP-202ENST00000368687 RHODO00212 210 aa12.82□□□□□ -0.36
CHTOP-202ENST00000368687 RHOHQ15669 191 aa12.82□□□□□ -0.36
CHTOP-202ENST00000368687 ESRGQ1W209 222 aa12.82□□□□□ -0.36
CHTOP-202ENST00000368687 TTC32Q5I0X7 151 aa12.82□□□□□ -0.36
CHTOP-202ENST00000368687 Q6ZR54 194 aa12.82□□□□□ -0.36
CHTOP-202ENST00000368687 LINC00336Q6ZUF6 198 aa12.82□□□□□ -0.36
CHTOP-202ENST00000368687 ZFP82Q8N141 532 aa12.82□□□□□ -0.36
CHTOP-202ENST00000368687 SCRT2Q9NQ03 307 aa12.82□□□□□ -0.36
CHTOP-202ENST00000368687 DNAH10Q8IVF4 4471 aa12.81□□□□□ -0.36
CHTOP-202ENST00000368687 IGLV2-18A0A075B6J9 118 aa12.81□□□□□ -0.36
CHTOP-202ENST00000368687 TMEM250H0YL14 139 aa12.81□□□□□ -0.36
CHTOP-202ENST00000368687 K7EQD1 137 aa12.81□□□□□ -0.36
CHTOP-202ENST00000368687 NDUFS6O75380 124 aaKnown RBP12.81□□□□□ -0.36
CHTOP-202ENST00000368687 GYPEP15421 78 aa12.81□□□□□ -0.36
CHTOP-202ENST00000368687 PRR27Q6MZM9 219 aa12.81□□□□□ -0.36
CHTOP-202ENST00000368687 DAZAP1Q96EP5 407 aaKnown RBP12.81□□□□□ -0.36
CHTOP-202ENST00000368687 GRIFINA4D1Z8 144 aa12.8□□□□□ -0.36
CHTOP-202ENST00000368687 RBFOX3A6NFN3 312 aa12.8□□□□□ -0.36
CHTOP-202ENST00000368687 RPS20P60866 119 aaKnown RBP12.8□□□□□ -0.36
CHTOP-202ENST00000368687 Q9H8V8 135 aa12.8□□□□□ -0.36
CHTOP-202ENST00000368687 BOLA1Q9Y3E2 137 aa12.8□□□□□ -0.36
CHTOP-202ENST00000368687 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
CHTOP-202ENST00000368687 NBDYA0A0U1RRE5 68 aa12.79□□□□□ -0.36
CHTOP-202ENST00000368687 A0A1W2PPQ1 181 aa12.79□□□□□ -0.36
CHTOP-202ENST00000368687 XKRY2A2RUG3 117 aa12.79□□□□□ -0.36
CHTOP-202ENST00000368687 M0R2N4 97 aa12.79□□□□□ -0.36
CHTOP-202ENST00000368687 PARLQ9H300 379 aa12.79□□□□□ -0.36
CHTOP-202ENST00000368687 OR5AL1P0C617 328 aa12.78□□□□□ -0.36
CHTOP-202ENST00000368687 BTF3P20290 206 aaKnown RBP12.78□□□□□ -0.36
CHTOP-202ENST00000368687 DMRTA1Q5VZB9 504 aa12.78□□□□□ -0.36
CHTOP-202ENST00000368687 SLC25A29Q8N8R3 303 aa12.78□□□□□ -0.36
CHTOP-202ENST00000368687 TIRAPP58753 221 aa12.77□□□□□ -0.37
CHTOP-202ENST00000368687 LYPD5Q6UWN5 251 aa12.77□□□□□ -0.37
CHTOP-202ENST00000368687 RAB19A4D1S5 217 aa12.76□□□□□ -0.37
CHTOP-202ENST00000368687 M0R381 172 aa12.76□□□□□ -0.37
CHTOP-202ENST00000368687 SNAI2O43623 268 aa12.76□□□□□ -0.37
CHTOP-202ENST00000368687 NXPH4O95158 308 aa12.76□□□□□ -0.37
CHTOP-202ENST00000368687 IGLV2-8P01709 118 aa12.76□□□□□ -0.37
CHTOP-202ENST00000368687 P01737 135 aa12.76□□□□□ -0.37
CHTOP-202ENST00000368687 C1orf134Q5TEV5 83 aa12.76□□□□□ -0.37
CHTOP-202ENST00000368687 ZNF575Q86XF7 245 aa12.76□□□□□ -0.37
CHTOP-202ENST00000368687 SFRP2Q96HF1 295 aa12.76□□□□□ -0.37
CHTOP-202ENST00000368687 SSBP4Q9BWG4 385 aaPredicted RBP12.76□□□□□ -0.37
CHTOP-202ENST00000368687 EIF5A2Q9GZV4 153 aaKnown RBP12.76□□□□□ -0.37
CHTOP-202ENST00000368687 TRBV20OR9-2A0A075B6H5 130 aa12.75□□□□□ -0.37
CHTOP-202ENST00000368687 K7EP13 123 aa12.75□□□□□ -0.37
CHTOP-202ENST00000368687 SIVA1O15304 175 aa12.75□□□□□ -0.37
CHTOP-202ENST00000368687 RPL19P84098 196 aaKnown RBP12.75□□□□□ -0.37
CHTOP-202ENST00000368687 IGHV3-73A0A0B4J1V6 119 aa12.74□□□□□ -0.37
CHTOP-202ENST00000368687 C19orf71A6NCJ1 209 aa12.74□□□□□ -0.37
CHTOP-202ENST00000368687 SPANXN1Q5VSR9 72 aa12.74□□□□□ -0.37
CHTOP-202ENST00000368687 UFSP1Q6NVU6 142 aa12.74□□□□□ -0.37
CHTOP-202ENST00000368687 TEX261Q6UWH6 196 aa12.74□□□□□ -0.37
CHTOP-202ENST00000368687 FAM210AQ96ND0 272 aa12.74□□□□□ -0.37
CHTOP-202ENST00000368687 TOR2AQ5JU69 321 aa12.73□□□□□ -0.37
CHTOP-202ENST00000368687 OR2D3Q8NGH3 330 aa12.73□□□□□ -0.37
CHTOP-202ENST00000368687 HECTD4Q9Y4D8 3996 aa12.72□□□□□ -0.37
CHTOP-202ENST00000368687 F2Z2F3 143 aa12.72□□□□□ -0.37
CHTOP-202ENST00000368687 FAM74A4Q5TZK3 123 aa12.72□□□□□ -0.37
CHTOP-202ENST00000368687 LY96Q9Y6Y9 160 aa12.72□□□□□ -0.37
CHTOP-202ENST00000368687 TRAV9-2A0A087WT02 112 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms