RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 PRR27Q6MZM9 219 aa10.91□□□□□ -0.66
PRKN-203ENST00000366894 OR4C5Q8NGB2 326 aa10.91□□□□□ -0.66
PRKN-203ENST00000366894 PHLDA3Q9Y5J5 127 aa10.91□□□□□ -0.66
PRKN-203ENST00000366894 TRAV4A0A0B4J268 109 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 IGKV3D-20A0A0C4DH25 116 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 TRGV4A0A0C4DH28 118 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 RAB19A4D1S5 217 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 A8MWV9 139 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 P01737 135 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 MED14OSP0DP75 135 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 CEBPGP53567 150 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 LGALS9CQ6DKI2 356 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 NHLRC2Q8NBF2 726 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 C9orf85Q96MD7 179 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 DERL1Q9BUN8 251 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 KRTAP3-3Q9BYR6 98 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 KRTAP3-2Q9BYR7 98 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 PARLQ9H300 379 aa10.9□□□□□ -0.66
PRKN-203ENST00000366894 ZNF727A8MUV8 499 aa10.89□□□□□ -0.67
PRKN-203ENST00000366894 M0R036 132 aa10.89□□□□□ -0.67
PRKN-203ENST00000366894 MRPL16Q9NX20 251 aaKnown RBP10.89□□□□□ -0.67
PRKN-203ENST00000366894 C11orf21Q9P2W6 132 aa10.89□□□□□ -0.67
PRKN-203ENST00000366894 PRO0255Q9UI72 69 aa10.89□□□□□ -0.67
PRKN-203ENST00000366894 APLNQ9ULZ1 77 aa10.89□□□□□ -0.67
PRKN-203ENST00000366894 HHLA3Q9XRX5 114 aa10.89□□□□□ -0.67
PRKN-203ENST00000366894 ARMS2P0C7Q2 107 aa10.88□□□□□ -0.67
PRKN-203ENST00000366894 TMEM88Q6PEY1 159 aa10.88□□□□□ -0.67
PRKN-203ENST00000366894 SMIM7Q9BQ49 75 aa10.88□□□□□ -0.67
PRKN-203ENST00000366894 PCLOQ9Y6V0 5065 aa10.88□□□□□ -0.67
PRKN-203ENST00000366894 A0A1W2PPQ1 181 aa10.87□□□□□ -0.67
PRKN-203ENST00000366894 F2Z2F3 143 aa10.87□□□□□ -0.67
PRKN-203ENST00000366894 RNASE3P12724 160 aaKnown RBP10.87□□□□□ -0.67
PRKN-203ENST00000366894 FAM3BP58499 235 aaPredicted RBP10.87□□□□□ -0.67
PRKN-203ENST00000366894 SH2D6Q7Z4S9 175 aa10.87□□□□□ -0.67
PRKN-203ENST00000366894 ZFP82Q8N141 532 aa10.87□□□□□ -0.67
PRKN-203ENST00000366894 PAX4O43316 350 aa10.86□□□□□ -0.67
PRKN-203ENST00000366894 SRP19P09132 144 aaKnown RBP10.86□□□□□ -0.67
PRKN-203ENST00000366894 CCL18P55774 89 aa10.86□□□□□ -0.67
PRKN-203ENST00000366894 TMEM241Q24JQ0 296 aa10.86□□□□□ -0.67
PRKN-203ENST00000366894 RNF212Q495C1 297 aa10.86□□□□□ -0.67
PRKN-203ENST00000366894 ZFP2Q6ZN57 461 aa10.86□□□□□ -0.67
PRKN-203ENST00000366894 OCC1Q8TAD7 63 aa10.86□□□□□ -0.67
PRKN-203ENST00000366894 PCNPQ8WW12 178 aaKnown RBP10.86□□□□□ -0.67
PRKN-203ENST00000366894 DNAH6Q9C0G6 4158 aa10.86□□□□□ -0.67
PRKN-203ENST00000366894 TRAV26-1A0A087WT03 109 aa10.85□□□□□ -0.67
PRKN-203ENST00000366894 TMSB15BA0A087X1C1 80 aa10.85□□□□□ -0.67
PRKN-203ENST00000366894 GRIFINA4D1Z8 144 aa10.85□□□□□ -0.67
PRKN-203ENST00000366894 RHODO00212 210 aa10.85□□□□□ -0.67
PRKN-203ENST00000366894 NUDT3O95989 172 aa10.85□□□□□ -0.67
PRKN-203ENST00000366894 OR5AL1P0C617 328 aa10.85□□□□□ -0.67
PRKN-203ENST00000366894 SOHLH1Q5JUK2 328 aa10.85□□□□□ -0.67
PRKN-203ENST00000366894 CLLU1Q5K131 121 aa10.85□□□□□ -0.67
PRKN-203ENST00000366894 OR2D3Q8NGH3 330 aa10.85□□□□□ -0.67
PRKN-203ENST00000366894 PRADC1Q9BSG0 188 aa10.85□□□□□ -0.67
PRKN-203ENST00000366894 C19orf71A6NCJ1 209 aa10.84□□□□□ -0.67
PRKN-203ENST00000366894 H3BVH4 76 aa10.84□□□□□ -0.67
PRKN-203ENST00000366894 RS1O15537 224 aa10.84□□□□□ -0.67
PRKN-203ENST00000366894 IGLV2-8P01709 118 aa10.84□□□□□ -0.67
PRKN-203ENST00000366894 CACNG7P62955 275 aa10.84□□□□□ -0.67
PRKN-203ENST00000366894 MRPL23Q16540 153 aaKnown RBP10.84□□□□□ -0.67
PRKN-203ENST00000366894 SPANXN1Q5VSR9 72 aa10.84□□□□□ -0.67
PRKN-203ENST00000366894 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
PRKN-203ENST00000366894 C15orf54Q8N8G6 183 aa10.84□□□□□ -0.67
PRKN-203ENST00000366894 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
PRKN-203ENST00000366894 DNAH10Q8IVF4 4471 aa10.84□□□□□ -0.67
PRKN-203ENST00000366894 PGPEP1LA6NFU8 196 aa10.83□□□□□ -0.68
PRKN-203ENST00000366894 A8MWL6 223 aa10.83□□□□□ -0.68
PRKN-203ENST00000366894 SMIM17P0DL12 118 aa10.83□□□□□ -0.68
PRKN-203ENST00000366894 ERVFC1-1P60608 527 aa10.83□□□□□ -0.68
PRKN-203ENST00000366894 FHL2Q14192 279 aa10.83□□□□□ -0.68
PRKN-203ENST00000366894 WDR73Q6P4I2 378 aa10.83□□□□□ -0.68
PRKN-203ENST00000366894 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
PRKN-203ENST00000366894 NUDT10Q8NFP7 164 aa10.83□□□□□ -0.68
PRKN-203ENST00000366894 NUDT11Q96G61 164 aa10.83□□□□□ -0.68
PRKN-203ENST00000366894 SSBP4Q9BWG4 385 aaPredicted RBP10.83□□□□□ -0.68
PRKN-203ENST00000366894 ICOSQ9Y6W8 199 aa10.83□□□□□ -0.68
PRKN-203ENST00000366894 TRBV20OR9-2A0A075B6H5 130 aa10.82□□□□□ -0.68
PRKN-203ENST00000366894 TRBV6-4A0A1B0GX49 114 aa10.82□□□□□ -0.68
PRKN-203ENST00000366894 GATCO43716 136 aaKnown RBP10.82□□□□□ -0.68
PRKN-203ENST00000366894 IGHV3-53P01767 116 aa10.82□□□□□ -0.68
PRKN-203ENST00000366894 HOXA5P20719 270 aa10.82□□□□□ -0.68
PRKN-203ENST00000366894 CRYBA4P53673 196 aa10.82□□□□□ -0.68
PRKN-203ENST00000366894 CFAP126Q5VTH2 177 aa10.82□□□□□ -0.68
PRKN-203ENST00000366894 FER1L6-AS1Q8NA97 138 aa10.82□□□□□ -0.68
PRKN-203ENST00000366894 RPP21Q9H633 154 aaKnown RBP10.82□□□□□ -0.68
PRKN-203ENST00000366894 NAT8Q9UHE5 227 aa10.82□□□□□ -0.68
PRKN-203ENST00000366894 HECTD4Q9Y4D8 3996 aa10.82□□□□□ -0.68
PRKN-203ENST00000366894 A0A0J9YY99 117 aa10.81□□□□□ -0.68
PRKN-203ENST00000366894 M0R381 172 aa10.81□□□□□ -0.68
PRKN-203ENST00000366894 SNAI2O43623 268 aa10.81□□□□□ -0.68
PRKN-203ENST00000366894 POM121L12Q8N7R1 296 aa10.81□□□□□ -0.68
PRKN-203ENST00000366894 BORCS7Q96B45 105 aa10.81□□□□□ -0.68
PRKN-203ENST00000366894 ZNF479Q96JC4 524 aa10.81□□□□□ -0.68
PRKN-203ENST00000366894 RHOHQ15669 191 aa10.8□□□□□ -0.68
PRKN-203ENST00000366894 CT83Q5H943 113 aa10.8□□□□□ -0.68
PRKN-203ENST00000366894 UQCC3Q6UW78 93 aa10.8□□□□□ -0.68
PRKN-203ENST00000366894 SMIM15Q7Z3B0 74 aa10.8□□□□□ -0.68
PRKN-203ENST00000366894 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.8□□□□□ -0.68
PRKN-203ENST00000366894 SFRP2Q96HF1 295 aa10.8□□□□□ -0.68
PRKN-203ENST00000366894 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms