RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 NPBQ8NG41 125 aa12.22□□□□□ -0.45
FBXO28-201ENST00000366862 SND1-IT1Q9HBX3 110 aa12.22□□□□□ -0.45
FBXO28-201ENST00000366862 IGLV11-55A0A075B6I3 123 aa12.21□□□□□ -0.45
FBXO28-201ENST00000366862 LY6G6EA0A0G2JKS1 128 aa12.21□□□□□ -0.45
FBXO28-201ENST00000366862 U3KQA8 63 aa12.21□□□□□ -0.45
FBXO28-201ENST00000366862 CFHR3Q02985 330 aa12.21□□□□□ -0.45
FBXO28-201ENST00000366862 TNRC6AQ8NDV7 1962 aaKnown RBP12.21□□□□□ -0.45
FBXO28-201ENST00000366862 CRYGBP07316 175 aa12.21□□□□□ -0.46
FBXO28-201ENST00000366862 LINC01356Q8N9X3 169 aa12.21□□□□□ -0.46
FBXO28-201ENST00000366862 UQCRQO14949 82 aa12.2□□□□□ -0.46
FBXO28-201ENST00000366862 ZNF503Q96F45 646 aa12.2□□□□□ -0.46
FBXO28-201ENST00000366862 THADAQ6YHU6 1953 aa12.2□□□□□ -0.46
FBXO28-201ENST00000366862 TP53TG3Q9ULZ0 132 aa12.2□□□□□ -0.46
FBXO28-201ENST00000366862 C9orf47Q6ZRZ4 202 aa12.2□□□□□ -0.46
FBXO28-201ENST00000366862 Q8N1Y9 231 aa12.2□□□□□ -0.46
FBXO28-201ENST00000366862 C3orf56Q8N813 242 aa12.2□□□□□ -0.46
FBXO28-201ENST00000366862 GDF5OSQ5U4N7 250 aa12.19□□□□□ -0.46
FBXO28-201ENST00000366862 CLEC2BQ92478 149 aa12.19□□□□□ -0.46
FBXO28-201ENST00000366862 THSD7BQ9C0I4 1608 aa12.19□□□□□ -0.46
FBXO28-201ENST00000366862 C5orf47Q569G3 176 aa12.18□□□□□ -0.46
FBXO28-201ENST00000366862 BUB3O43684 328 aa12.18□□□□□ -0.46
FBXO28-201ENST00000366862 MSMBP08118 114 aa12.18□□□□□ -0.46
FBXO28-201ENST00000366862 CTSZQ9UBR2 303 aa12.18□□□□□ -0.46
FBXO28-201ENST00000366862 DIDO1Q9BTC0 2240 aaKnown RBP12.18□□□□□ -0.46
FBXO28-201ENST00000366862 CTSGP08311 255 aa12.18□□□□□ -0.46
FBXO28-201ENST00000366862 RPL39P62891 51 aaKnown RBP12.18□□□□□ -0.46
FBXO28-201ENST00000366862 LOXL1Q08397 574 aaPredicted RBP12.17□□□□□ -0.46
FBXO28-201ENST00000366862 IGFL3Q6UXB1 125 aa12.17□□□□□ -0.46
FBXO28-201ENST00000366862 MBD6Q96DN6 1003 aa12.17□□□□□ -0.46
FBXO28-201ENST00000366862 IGLV2-23P01705 113 aa12.17□□□□□ -0.46
FBXO28-201ENST00000366862 SPRY2O43597 315 aa12.16□□□□□ -0.46
FBXO28-201ENST00000366862 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
FBXO28-201ENST00000366862 C16orf54Q6UWD8 224 aa12.16□□□□□ -0.46
FBXO28-201ENST00000366862 RNF152Q8N8N0 203 aa12.16□□□□□ -0.46
FBXO28-201ENST00000366862 TRAV4A0A0B4J268 109 aa12.16□□□□□ -0.46
FBXO28-201ENST00000366862 U3KQE9 123 aa12.16□□□□□ -0.46
FBXO28-201ENST00000366862 AKAP6Q13023 2319 aa12.16□□□□□ -0.46
FBXO28-201ENST00000366862 IGHV1-58A0A0C4DH39 117 aa12.15□□□□□ -0.46
FBXO28-201ENST00000366862 ZNF295-AS1Q8N0V1 137 aa12.15□□□□□ -0.46
FBXO28-201ENST00000366862 INTS1Q8N201 2190 aaKnown RBP12.15□□□□□ -0.46
FBXO28-201ENST00000366862 DAD1P61803 113 aa12.15□□□□□ -0.46
FBXO28-201ENST00000366862 SHANK1Q9Y566 2161 aa12.15□□□□□ -0.46
FBXO28-201ENST00000366862 ELANEP08246 267 aa12.15□□□□□ -0.46
FBXO28-201ENST00000366862 TMEM61Q8N0U2 210 aa12.15□□□□□ -0.46
FBXO28-201ENST00000366862 COX7B2Q8TF08 81 aa12.14□□□□□ -0.47
FBXO28-201ENST00000366862 RITA1Q96K30 269 aa12.14□□□□□ -0.47
FBXO28-201ENST00000366862 SPATA25Q9BR10 227 aa12.14□□□□□ -0.47
FBXO28-201ENST00000366862 MLST8Q9BVC4 326 aa12.14□□□□□ -0.47
FBXO28-201ENST00000366862 TEX22C9J3V5 150 aa12.14□□□□□ -0.47
FBXO28-201ENST00000366862 COL4A6Q14031 1691 aa12.14□□□□□ -0.47
FBXO28-201ENST00000366862 EML6Q6ZMW3 1958 aa12.14□□□□□ -0.47
FBXO28-201ENST00000366862 HOXB4P17483 251 aaPredicted RBP12.14□□□□□ -0.47
FBXO28-201ENST00000366862 PRAC2D3DTV9 90 aa12.13□□□□□ -0.47
FBXO28-201ENST00000366862 FUSP35637 526 aaKnown RBP eCLIP12.13□□□□□ -0.47
FBXO28-201ENST00000366862 C3orf22Q8N5N4 141 aa12.13□□□□□ -0.47
FBXO28-201ENST00000366862 TANC1Q9C0D5 1861 aa12.13□□□□□ -0.47
FBXO28-201ENST00000366862 DAZ2Q13117 558 aaKnown RBP12.13□□□□□ -0.47
FBXO28-201ENST00000366862 DAZ4Q86SG3 579 aaKnown RBP12.13□□□□□ -0.47
FBXO28-201ENST00000366862 DAZ3Q9NR90 486 aaKnown RBP12.13□□□□□ -0.47
FBXO28-201ENST00000366862 PRSS33Q8NF86 280 aa12.13□□□□□ -0.47
FBXO28-201ENST00000366862 IGHV7-81A0A0B4J1V7 117 aa12.12□□□□□ -0.47
FBXO28-201ENST00000366862 ANGP03950 147 aaKnown RBP12.12□□□□□ -0.47
FBXO28-201ENST00000366862 XCL1P47992 114 aa12.12□□□□□ -0.47
FBXO28-201ENST00000366862 MIAQ16674 131 aa12.12□□□□□ -0.47
FBXO28-201ENST00000366862 F5H768 121 aa12.12□□□□□ -0.47
FBXO28-201ENST00000366862 VSIG2Q96IQ7 327 aa12.12□□□□□ -0.47
FBXO28-201ENST00000366862 MRPL36Q9P0J6 103 aaKnown RBP12.12□□□□□ -0.47
FBXO28-201ENST00000366862 FAM215AQ9Y5M1 114 aa12.12□□□□□ -0.47
FBXO28-201ENST00000366862 LINC00322Q6ZN03 302 aaPredicted RBP12.12□□□□□ -0.47
FBXO28-201ENST00000366862 LECT2O14960 151 aa12.11□□□□□ -0.47
FBXO28-201ENST00000366862 DAND5Q8N907 189 aa12.11□□□□□ -0.47
FBXO28-201ENST00000366862 CACNA1EQ15878 2313 aa12.11□□□□□ -0.47
FBXO28-201ENST00000366862 ANAPC1Q9H1A4 1944 aa12.11□□□□□ -0.47
FBXO28-201ENST00000366862 PLXNB3Q9ULL4 1909 aa12.11□□□□□ -0.47
FBXO28-201ENST00000366862 IGKV1D-37A0A075B6S9 117 aa12.11□□□□□ -0.47
FBXO28-201ENST00000366862 SPRNQ5BIV9 151 aa12.11□□□□□ -0.47
FBXO28-201ENST00000366862 TP73-AS1Q9UF72 201 aa12.1□□□□□ -0.47
FBXO28-201ENST00000366862 IGHV3-30-3P0DP02 117 aa12.1□□□□□ -0.47
FBXO28-201ENST00000366862 C20orf203Q8NBC4 194 aa12.1□□□□□ -0.47
FBXO28-201ENST00000366862 MDFICQ9P1T7 246 aa12.1□□□□□ -0.47
FBXO28-201ENST00000366862 K7EQD1 137 aa12.1□□□□□ -0.47
FBXO28-201ENST00000366862 TMEM256-PLSCR3K7ERE1 68 aa12.1□□□□□ -0.47
FBXO28-201ENST00000366862 RNF114Q9Y508 228 aa12.1□□□□□ -0.47
FBXO28-201ENST00000366862 PSCAO43653 123 aa12.09□□□□□ -0.47
FBXO28-201ENST00000366862 C5orf38Q86SI9 138 aa12.09□□□□□ -0.47
FBXO28-201ENST00000366862 TEX49A0A1B0GTD5 131 aa12.09□□□□□ -0.47
FBXO28-201ENST00000366862 P0DMU3 169 aa12.09□□□□□ -0.47
FBXO28-201ENST00000366862 FAM231AP0DMU4 169 aa12.09□□□□□ -0.47
FBXO28-201ENST00000366862 FAM231CP0DMU5 169 aa12.09□□□□□ -0.47
FBXO28-201ENST00000366862 COL4A3Q01955 1670 aa12.09□□□□□ -0.47
FBXO28-201ENST00000366862 IGLC6P0CF74 106 aa12.09□□□□□ -0.47
FBXO28-201ENST00000366862 PDE6GP18545 87 aa12.09□□□□□ -0.47
FBXO28-201ENST00000366862 CENPVL3A0A0U1RRI6 287 aa12.09□□□□□ -0.47
FBXO28-201ENST00000366862 COX7A2LO14548 114 aa12.08□□□□□ -0.47
FBXO28-201ENST00000366862 MP68P56378 58 aa12.08□□□□□ -0.47
FBXO28-201ENST00000366862 NREPQ16612 68 aa12.08□□□□□ -0.47
FBXO28-201ENST00000366862 NEXN-AS1Q8NBZ9 246 aa12.08□□□□□ -0.47
FBXO28-201ENST00000366862 BRK1Q8WUW1 75 aa12.08□□□□□ -0.47
FBXO28-201ENST00000366862 OBSL1O75147 1896 aa12.08□□□□□ -0.48
FBXO28-201ENST00000366862 E7EUB6 86 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms