RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ADAMTS9Q9P2N4 1935 aa10.8□□□□□ -0.68
SMC5-201ENST00000361138 FAM236AA0A1B0GUQ0 79 aa10.8□□□□□ -0.68
SMC5-201ENST00000361138 FAM236BA0A1B0GV22 79 aa10.8□□□□□ -0.68
SMC5-201ENST00000361138 C2orf16Q68DN1 1984 aa10.8□□□□□ -0.68
SMC5-201ENST00000361138 A0A0B4J2C4 111 aa10.8□□□□□ -0.68
SMC5-201ENST00000361138 RPL39P62891 51 aaKnown RBP10.8□□□□□ -0.68
SMC5-201ENST00000361138 U3KQK5 164 aa10.8□□□□□ -0.68
SMC5-201ENST00000361138 DNAJC13O75165 2243 aa10.79□□□□□ -0.68
SMC5-201ENST00000361138 B4DSR2 109 aa10.79□□□□□ -0.68
SMC5-201ENST00000361138 DSCR9P59020 149 aa10.79□□□□□ -0.68
SMC5-201ENST00000361138 NBL1P41271 181 aa10.79□□□□□ -0.68
SMC5-201ENST00000361138 Q9H8V8 135 aa10.79□□□□□ -0.68
SMC5-201ENST00000361138 MYO7BQ6PIF6 2116 aa10.79□□□□□ -0.68
SMC5-201ENST00000361138 PRR30Q53SZ7 412 aaPredicted RBP10.79□□□□□ -0.68
SMC5-201ENST00000361138 IGHV7-81A0A0B4J1V7 117 aa10.79□□□□□ -0.68
SMC5-201ENST00000361138 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.78□□□□□ -0.68
SMC5-201ENST00000361138 IGKV2-29A2NJV5 120 aaPredicted RBP10.78□□□□□ -0.68
SMC5-201ENST00000361138 TIMM17AQ99595 171 aa10.78□□□□□ -0.68
SMC5-201ENST00000361138 AHCTF1Q8WYP5 2266 aa10.78□□□□□ -0.68
SMC5-201ENST00000361138 TINCRA0A1B0GVN0 87 aa10.78□□□□□ -0.68
SMC5-201ENST00000361138 H3BUA1 57 aa10.78□□□□□ -0.68
SMC5-201ENST00000361138 TMEM243Q9BU79 118 aa10.78□□□□□ -0.68
SMC5-201ENST00000361138 RPL35AP18077 110 aaKnown RBP10.78□□□□□ -0.68
SMC5-201ENST00000361138 C16orf54Q6UWD8 224 aa10.78□□□□□ -0.68
SMC5-201ENST00000361138 MED14OSP0DP75 135 aa10.77□□□□□ -0.68
SMC5-201ENST00000361138 EML6Q6ZMW3 1958 aa10.77□□□□□ -0.68
SMC5-201ENST00000361138 A0A0J9YXV3 536 aa10.77□□□□□ -0.69
SMC5-201ENST00000361138 RS1O15537 224 aa10.77□□□□□ -0.69
SMC5-201ENST00000361138 ZNF80P51504 273 aaPredicted RBP10.77□□□□□ -0.69
SMC5-201ENST00000361138 RBMY1FQ15415 496 aaKnown RBP10.77□□□□□ -0.69
SMC5-201ENST00000361138 MYCNOSP40205 109 aa10.77□□□□□ -0.69
SMC5-201ENST00000361138 DKK4Q9UBT3 224 aa10.77□□□□□ -0.69
SMC5-201ENST00000361138 C11orf44Q8N8P7 122 aa10.77□□□□□ -0.69
SMC5-201ENST00000361138 XCL2Q9UBD3 114 aa10.77□□□□□ -0.69
SMC5-201ENST00000361138 LINC00574Q9H8X3 128 aa10.76□□□□□ -0.69
SMC5-201ENST00000361138 IGLC6P0CF74 106 aa10.76□□□□□ -0.69
SMC5-201ENST00000361138 CGB3P0DN86 165 aa10.76□□□□□ -0.69
SMC5-201ENST00000361138 CGB7P0DN87 165 aa10.76□□□□□ -0.69
SMC5-201ENST00000361138 J3KT08 172 aa10.76□□□□□ -0.69
SMC5-201ENST00000361138 NDUFV3P56181 108 aaKnown RBP10.75□□□□□ -0.69
SMC5-201ENST00000361138 MSMPQ1L6U9 139 aa10.75□□□□□ -0.69
SMC5-201ENST00000361138 IGKV2D-26A0A0A0MRZ7 120 aa10.75□□□□□ -0.69
SMC5-201ENST00000361138 LGALS9O00182 355 aa10.75□□□□□ -0.69
SMC5-201ENST00000361138 HERV-K104P63124 156 aa10.75□□□□□ -0.69
SMC5-201ENST00000361138 Q8N7P7 452 aa10.75□□□□□ -0.69
SMC5-201ENST00000361138 CLEC2BQ92478 149 aa10.75□□□□□ -0.69
SMC5-201ENST00000361138 ATOX1O00244 68 aa10.75□□□□□ -0.69
SMC5-201ENST00000361138 H3BT86 120 aa10.75□□□□□ -0.69
SMC5-201ENST00000361138 RPL32P62910 135 aaKnown RBP10.75□□□□□ -0.69
SMC5-201ENST00000361138 IGFL2Q6UWQ7 119 aa10.75□□□□□ -0.69
SMC5-201ENST00000361138 LINC01619G3V211 115 aa10.74□□□□□ -0.69
SMC5-201ENST00000361138 CRLF1O75462 422 aa10.74□□□□□ -0.69
SMC5-201ENST00000361138 IGLV1-47P01700 117 aa10.74□□□□□ -0.69
SMC5-201ENST00000361138 WT1P19544 449 aaPredicted RBP10.74□□□□□ -0.69
SMC5-201ENST00000361138 MAPKAPK5-AS1Q8N8E1 139 aa10.74□□□□□ -0.69
SMC5-201ENST00000361138 SPATA25Q9BR10 227 aa10.74□□□□□ -0.69
SMC5-201ENST00000361138 GNLYP22749 145 aa10.74□□□□□ -0.69
SMC5-201ENST00000361138 CFHR3Q02985 330 aa10.74□□□□□ -0.69
SMC5-201ENST00000361138 Q71RC1 249 aaPredicted RBP10.74□□□□□ -0.69
SMC5-201ENST00000361138 ORMDL1Q9P0S3 153 aa10.73□□□□□ -0.69
SMC5-201ENST00000361138 HAMPP81172 84 aa10.73□□□□□ -0.69
SMC5-201ENST00000361138 CRIP1P50238 77 aa10.73□□□□□ -0.69
SMC5-201ENST00000361138 DAZAP2Q15038 168 aaPredicted RBP10.73□□□□□ -0.69
SMC5-201ENST00000361138 NEXN-AS1Q8NBZ9 246 aa10.73□□□□□ -0.69
SMC5-201ENST00000361138 SLC25A29Q8N8R3 303 aa10.73□□□□□ -0.69
SMC5-201ENST00000361138 PRO3102Q9H379 93 aa10.72□□□□□ -0.69
SMC5-201ENST00000361138 MSMBP08118 114 aa10.72□□□□□ -0.69
SMC5-201ENST00000361138 NSUN5P1Q3KNT7 163 aa10.72□□□□□ -0.69
SMC5-201ENST00000361138 Q8N1Y9 231 aa10.72□□□□□ -0.69
SMC5-201ENST00000361138 DSCR8Q96T75 97 aa10.72□□□□□ -0.69
SMC5-201ENST00000361138 CENPVL3A0A0U1RRI6 287 aa10.71□□□□□ -0.69
SMC5-201ENST00000361138 C3orf56Q8N813 242 aa10.71□□□□□ -0.69
SMC5-201ENST00000361138 LINC01356Q8N9X3 169 aa10.71□□□□□ -0.69
SMC5-201ENST00000361138 ZNF407Q9C0G0 2248 aa10.71□□□□□ -0.69
SMC5-201ENST00000361138 IGLV2-11P01706 119 aa10.71□□□□□ -0.69
SMC5-201ENST00000361138 ATG2AQ2TAZ0 1938 aa10.71□□□□□ -0.7
SMC5-201ENST00000361138 DAND5Q8N907 189 aa10.71□□□□□ -0.7
SMC5-201ENST00000361138 Q8N9W7 124 aa10.71□□□□□ -0.7
SMC5-201ENST00000361138 RNF185Q96GF1 192 aa10.71□□□□□ -0.7
SMC5-201ENST00000361138 A0A1B0GX51 115 aa10.71□□□□□ -0.7
SMC5-201ENST00000361138 NXPH4O95158 308 aa10.7□□□□□ -0.7
SMC5-201ENST00000361138 FANCD2OSQ96PS1 177 aa10.7□□□□□ -0.7
SMC5-201ENST00000361138 SEM1Q6ZVN7 128 aa10.7□□□□□ -0.7
SMC5-201ENST00000361138 K7ENP7 123 aa10.69□□□□□ -0.7
SMC5-201ENST00000361138 PIP4P1Q86T03 277 aa10.69□□□□□ -0.7
SMC5-201ENST00000361138 TNRC6BQ9UPQ9 1833 aaKnown RBP10.69□□□□□ -0.7
SMC5-201ENST00000361138 CACNA1EQ15878 2313 aa10.69□□□□□ -0.7
SMC5-201ENST00000361138 IGKV3D-7A0A0C4DH55 119 aa10.69□□□□□ -0.7
SMC5-201ENST00000361138 NFE4Q86UQ8 179 aa10.69□□□□□ -0.7
SMC5-201ENST00000361138 DEFB130BP0DP73 79 aa10.68□□□□□ -0.7
SMC5-201ENST00000361138 DEFB130AP0DP74 79 aa10.68□□□□□ -0.7
SMC5-201ENST00000361138 UFSP1Q6NVU6 142 aa10.68□□□□□ -0.7
SMC5-201ENST00000361138 MRAPQ8TCY5 172 aa10.68□□□□□ -0.7
SMC5-201ENST00000361138 URB1-AS1Q96HZ7 61 aa10.68□□□□□ -0.7
SMC5-201ENST00000361138 IGHV1-58A0A0C4DH39 117 aa10.68□□□□□ -0.7
SMC5-201ENST00000361138 GATA3P23771 443 aa10.68□□□□□ -0.7
SMC5-201ENST00000361138 ICE1Q9Y2F5 2266 aa10.68□□□□□ -0.7
SMC5-201ENST00000361138 TEX49A0A1B0GTD5 131 aa10.68□□□□□ -0.7
SMC5-201ENST00000361138 PCNX3Q9H6A9 2034 aa10.67□□□□□ -0.7
SMC5-201ENST00000361138 U3KQE9 123 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms