RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 LINC00467Q9BRT7 94 aa12.45□□□□□ -0.42
TPM1-205ENST00000357980 RPL35AP18077 110 aaKnown RBP12.44□□□□□ -0.42
TPM1-205ENST00000357980 C9orf85Q96MD7 179 aa12.44□□□□□ -0.42
TPM1-205ENST00000357980 MDFICQ9P1T7 246 aa12.44□□□□□ -0.42
TPM1-205ENST00000357980 TIMM8BQ9Y5J9 83 aaPredicted RBP12.44□□□□□ -0.42
TPM1-205ENST00000357980 SPRY2O43597 315 aa12.44□□□□□ -0.42
TPM1-205ENST00000357980 NXPH4O95158 308 aa12.44□□□□□ -0.42
TPM1-205ENST00000357980 OXLD1Q5BKU9 147 aa12.44□□□□□ -0.42
TPM1-205ENST00000357980 SPANXN1Q5VSR9 72 aa12.44□□□□□ -0.42
TPM1-205ENST00000357980 MORN3Q6PF18 240 aaPredicted RBP12.44□□□□□ -0.42
TPM1-205ENST00000357980 C1orf158Q8N1D5 194 aa12.44□□□□□ -0.42
TPM1-205ENST00000357980 PHLDA3Q9Y5J5 127 aa12.44□□□□□ -0.42
TPM1-205ENST00000357980 CMYA5Q8N3K9 4069 aa12.43□□□□□ -0.42
TPM1-205ENST00000357980 TRGV11A0A075B6L2 103 aa12.43□□□□□ -0.42
TPM1-205ENST00000357980 DMRTA1Q5VZB9 504 aa12.43□□□□□ -0.42
TPM1-205ENST00000357980 TMEM191AQ9H0A3 160 aa12.43□□□□□ -0.42
TPM1-205ENST00000357980 LOC102724200A0A096LPH7 203 aaPredicted RBP12.42□□□□□ -0.42
TPM1-205ENST00000357980 CBY3A6NI87 242 aa12.42□□□□□ -0.42
TPM1-205ENST00000357980 TMEM256Q8N2U0 113 aa12.42□□□□□ -0.42
TPM1-205ENST00000357980 C5orf52A6NGY3 159 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 S100A6P06703 90 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 FAM104BQ5XKR9 115 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 LINC01587Q99440 93 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 MDFIQ99750 246 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 M0R381 172 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 PRM2P04554 102 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 SRIP30626 198 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 NDUFA6P56556 154 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 AMN1Q8IY45 258 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 CSNK1G2-AS1Q8NCQ2 148 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 C1QTNF4Q9BXJ3 329 aa12.41□□□□□ -0.42
TPM1-205ENST00000357980 HTN1P15515 57 aa12.4□□□□□ -0.42
TPM1-205ENST00000357980 SNRPEP62304 92 aaKnown RBP12.4□□□□□ -0.42
TPM1-205ENST00000357980 EGFEM1PQ0D2K5 195 aa12.4□□□□□ -0.42
TPM1-205ENST00000357980 COA6Q5JTJ3 125 aaKnown RBP12.4□□□□□ -0.42
TPM1-205ENST00000357980 ALKBH7Q9BT30 221 aaPredicted RBP12.4□□□□□ -0.42
TPM1-205ENST00000357980 LOC105371267A0A1B0GV96 52 aa12.39□□□□□ -0.43
TPM1-205ENST00000357980 EVI2AP22794 236 aa12.39□□□□□ -0.43
TPM1-205ENST00000357980 KRTAP10-11P60412 298 aa12.39□□□□□ -0.43
TPM1-205ENST00000357980 C11orf72Q8NBR9 251 aa12.39□□□□□ -0.43
TPM1-205ENST00000357980 RNF185Q96GF1 192 aa12.39□□□□□ -0.43
TPM1-205ENST00000357980 TMEM208Q9BTX3 173 aa12.39□□□□□ -0.43
TPM1-205ENST00000357980 CSTL1Q9H114 145 aa12.38□□□□□ -0.43
TPM1-205ENST00000357980 Q0VG73 95 aa12.37□□□□□ -0.43
TPM1-205ENST00000357980 MRPL51Q4U2R6 128 aaKnown RBP12.37□□□□□ -0.43
TPM1-205ENST00000357980 IGHV3OR16-12A0A075B7B8 117 aa12.37□□□□□ -0.43
TPM1-205ENST00000357980 RAB4AP20338 218 aa12.37□□□□□ -0.43
TPM1-205ENST00000357980 ZNF415Q09FC8 603 aa12.37□□□□□ -0.43
TPM1-205ENST00000357980 GOLT1BQ9Y3E0 138 aa12.37□□□□□ -0.43
TPM1-205ENST00000357980 U3KQK5 164 aa12.37□□□□□ -0.43
TPM1-205ENST00000357980 UBE2CO00762 179 aa12.36□□□□□ -0.43
TPM1-205ENST00000357980 AZU1P20160 251 aa12.36□□□□□ -0.43
TPM1-205ENST00000357980 OR10J3Q5JRS4 329 aa12.36□□□□□ -0.43
TPM1-205ENST00000357980 ZNF705AQ6ZN79 300 aaPredicted RBP12.36□□□□□ -0.43
TPM1-205ENST00000357980 SMIM15Q7Z3B0 74 aa12.36□□□□□ -0.43
TPM1-205ENST00000357980 C18orf32Q8TCD1 76 aa12.36□□□□□ -0.43
TPM1-205ENST00000357980 AP1S3Q96PC3 154 aa12.36□□□□□ -0.43
TPM1-205ENST00000357980 GSN-AS1Q9NRJ2 163 aa12.36□□□□□ -0.43
TPM1-205ENST00000357980 HOXA5P20719 270 aa12.35□□□□□ -0.43
TPM1-205ENST00000357980 RNASE8Q8TDE3 154 aaKnown RBP12.35□□□□□ -0.43
TPM1-205ENST00000357980 D6R8Y8 96 aa12.34□□□□□ -0.43
TPM1-205ENST00000357980 LINC00310P59036 64 aa12.34□□□□□ -0.43
TPM1-205ENST00000357980 KIR2DL5BA0A0G2JN68 375 aa12.34□□□□□ -0.43
TPM1-205ENST00000357980 KIR2DL5BA0A0G2JPC4 375 aa12.34□□□□□ -0.43
TPM1-205ENST00000357980 LURAP1LQ8IV03 231 aa12.34□□□□□ -0.43
TPM1-205ENST00000357980 KIR2DL5AQ8N109 375 aa12.34□□□□□ -0.43
TPM1-205ENST00000357980 C14orf178Q8N769 122 aaPredicted RBP12.34□□□□□ -0.43
TPM1-205ENST00000357980 SYT8Q8NBV8 401 aa12.34□□□□□ -0.43
TPM1-205ENST00000357980 KIR2DL5BQ8NHK3 375 aa12.34□□□□□ -0.43
TPM1-205ENST00000357980 IL17DQ8TAD2 202 aa12.34□□□□□ -0.43
TPM1-205ENST00000357980 KIF25-AS1Q9Y6Z4 181 aa12.34□□□□□ -0.43
TPM1-205ENST00000357980 G3V4G9 280 aa12.33□□□□□ -0.44
TPM1-205ENST00000357980 IGHV4-30-4P0DP06 118 aa12.33□□□□□ -0.44
TPM1-205ENST00000357980 ZNF876PQ49A33 203 aa12.33□□□□□ -0.44
TPM1-205ENST00000357980 ORMDL3Q8N138 153 aa12.33□□□□□ -0.44
TPM1-205ENST00000357980 TMEM263Q8WUH6 116 aaKnown RBP12.33□□□□□ -0.44
TPM1-205ENST00000357980 PTH2Q96A98 100 aa12.33□□□□□ -0.44
TPM1-205ENST00000357980 RCHY1Q96PM5 261 aa12.33□□□□□ -0.44
TPM1-205ENST00000357980 DPH3P1Q9H4G8 78 aa12.33□□□□□ -0.44
TPM1-205ENST00000357980 JPT2Q9H910 190 aa12.33□□□□□ -0.44
TPM1-205ENST00000357980 M0R2P5 195 aa12.32□□□□□ -0.44
TPM1-205ENST00000357980 IQCJQ1A5X6 159 aa12.32□□□□□ -0.44
TPM1-205ENST00000357980 PIK3CD-AS1Q5SR53 167 aa12.32□□□□□ -0.44
TPM1-205ENST00000357980 SAMD5Q5TGI4 173 aa12.32□□□□□ -0.44
TPM1-205ENST00000357980 HIST3H2BBQ8N257 126 aa12.32□□□□□ -0.44
TPM1-205ENST00000357980 SPXQ9BT56 116 aa12.32□□□□□ -0.44
TPM1-205ENST00000357980 ZMAT5Q9UDW3 170 aaKnown RBP12.32□□□□□ -0.44
TPM1-205ENST00000357980 SMKR1H3BMG3 65 aa12.32□□□□□ -0.44
TPM1-205ENST00000357980 PPBPP02775 128 aa12.32□□□□□ -0.44
TPM1-205ENST00000357980 CKS2P33552 79 aa12.32□□□□□ -0.44
TPM1-205ENST00000357980 LINC00315P59091 139 aa12.32□□□□□ -0.44
TPM1-205ENST00000357980 BAGE3Q86Y29 109 aa12.32□□□□□ -0.44
TPM1-205ENST00000357980 IFITM10A6NMD0 228 aa12.31□□□□□ -0.44
TPM1-205ENST00000357980 NUPR1O60356 82 aa12.31□□□□□ -0.44
TPM1-205ENST00000357980 SERF1AO75920 110 aa12.31□□□□□ -0.44
TPM1-205ENST00000357980 GAS8-AS1O95177 125 aa12.31□□□□□ -0.44
TPM1-205ENST00000357980 NCR2O95944 276 aa12.31□□□□□ -0.44
TPM1-205ENST00000357980 APOC4P55056 127 aa12.31□□□□□ -0.44
TPM1-205ENST00000357980 POM121L12Q8N7R1 296 aa12.31□□□□□ -0.44
TPM1-205ENST00000357980 PRELID3AQ96N28 172 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 953.6 ms