RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 H0YGX0 51 aa11.57□□□□□ -0.56
CHD4-201ENST00000357008 SPRY2O43597 315 aa11.57□□□□□ -0.56
CHD4-201ENST00000357008 XCL1P47992 114 aa11.57□□□□□ -0.56
CHD4-201ENST00000357008 WFDC2Q14508 124 aa11.57□□□□□ -0.56
CHD4-201ENST00000357008 ICOSQ9Y6W8 199 aa11.57□□□□□ -0.56
CHD4-201ENST00000357008 A0A0J9YXV3 536 aa11.57□□□□□ -0.56
CHD4-201ENST00000357008 RMI2Q96E14 147 aa11.57□□□□□ -0.56
CHD4-201ENST00000357008 CENPVL3A0A0U1RRI6 287 aa11.56□□□□□ -0.56
CHD4-201ENST00000357008 PCNX1Q96RV3 2341 aa11.56□□□□□ -0.56
CHD4-201ENST00000357008 LINC01620Q4KN68 170 aa11.56□□□□□ -0.56
CHD4-201ENST00000357008 WDR81Q562E7 1941 aa11.56□□□□□ -0.56
CHD4-201ENST00000357008 CLPSL2Q6UWE3 100 aa11.56□□□□□ -0.56
CHD4-201ENST00000357008 NOP10Q9NPE3 64 aaKnown RBP11.56□□□□□ -0.56
CHD4-201ENST00000357008 A0A096LPF7 62 aa11.56□□□□□ -0.56
CHD4-201ENST00000357008 hADV29S1A0JD25 119 aa11.56□□□□□ -0.56
CHD4-201ENST00000357008 CTSGP08311 255 aa11.56□□□□□ -0.56
CHD4-201ENST00000357008 IGHV7-81A0A0B4J1V7 117 aa11.55□□□□□ -0.56
CHD4-201ENST00000357008 NBL1P41271 181 aa11.55□□□□□ -0.56
CHD4-201ENST00000357008 PRSS33Q8NF86 280 aa11.55□□□□□ -0.56
CHD4-201ENST00000357008 Q96MF0 132 aa11.55□□□□□ -0.56
CHD4-201ENST00000357008 TICRRQ7Z2Z1 1910 aa11.55□□□□□ -0.56
CHD4-201ENST00000357008 A0A0B4J2C4 111 aa11.55□□□□□ -0.56
CHD4-201ENST00000357008 BUB3O43684 328 aa11.55□□□□□ -0.56
CHD4-201ENST00000357008 PLA2G2CQ5R387 149 aa11.54□□□□□ -0.56
CHD4-201ENST00000357008 C3orf56Q8N813 242 aa11.54□□□□□ -0.56
CHD4-201ENST00000357008 RNF152Q8N8N0 203 aa11.54□□□□□ -0.56
CHD4-201ENST00000357008 SPRNQ5BIV9 151 aa11.54□□□□□ -0.56
CHD4-201ENST00000357008 IGFBPL1Q8WX77 278 aa11.54□□□□□ -0.56
CHD4-201ENST00000357008 KMT2EQ8IZD2 1858 aa11.54□□□□□ -0.56
CHD4-201ENST00000357008 TRAV4A0A0B4J268 109 aa11.54□□□□□ -0.56
CHD4-201ENST00000357008 SND1-IT1Q9HBX3 110 aa11.54□□□□□ -0.56
CHD4-201ENST00000357008 GTF3C1Q12789 2109 aa11.53□□□□□ -0.56
CHD4-201ENST00000357008 CHD3Q12873 2000 aaKnown RBP11.53□□□□□ -0.56
CHD4-201ENST00000357008 E9PLD3 99 aa11.53□□□□□ -0.56
CHD4-201ENST00000357008 ATOX1O00244 68 aa11.53□□□□□ -0.56
CHD4-201ENST00000357008 FOXI1Q12951 378 aa11.53□□□□□ -0.56
CHD4-201ENST00000357008 C16orf54Q6UWD8 224 aa11.53□□□□□ -0.56
CHD4-201ENST00000357008 TTTY13Q9BZ97 58 aa11.53□□□□□ -0.56
CHD4-201ENST00000357008 RITA1Q96K30 269 aa11.53□□□□□ -0.56
CHD4-201ENST00000357008 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
CHD4-201ENST00000357008 WI2-2373I1.2A0A1W2PRP0 233 aa11.52□□□□□ -0.56
CHD4-201ENST00000357008 CTRLP40313 264 aa11.52□□□□□ -0.56
CHD4-201ENST00000357008 TOMM6Q96B49 74 aa11.52□□□□□ -0.57
CHD4-201ENST00000357008 VPREB3Q9UKI3 123 aa11.52□□□□□ -0.57
CHD4-201ENST00000357008 MED13LQ71F56 2210 aa11.52□□□□□ -0.57
CHD4-201ENST00000357008 TRBV6-1A0A0K0K1D8 114 aa11.52□□□□□ -0.57
CHD4-201ENST00000357008 SMIM20Q8N5G0 67 aa11.51□□□□□ -0.57
CHD4-201ENST00000357008 BAALCQ8WXS3 180 aa11.51□□□□□ -0.57
CHD4-201ENST00000357008 TIMM17AQ99595 171 aa11.51□□□□□ -0.57
CHD4-201ENST00000357008 C11orf1Q9H5F2 150 aa11.51□□□□□ -0.57
CHD4-201ENST00000357008 IGKV1OR2-108A0A075B7D4 117 aa11.51□□□□□ -0.57
CHD4-201ENST00000357008 DEFB112Q30KQ8 113 aa11.51□□□□□ -0.57
CHD4-201ENST00000357008 C9orf47Q6ZRZ4 202 aa11.51□□□□□ -0.57
CHD4-201ENST00000357008 IGLV2-14P01704 120 aa11.5□□□□□ -0.57
CHD4-201ENST00000357008 DAZ2Q13117 558 aaKnown RBP11.5□□□□□ -0.57
CHD4-201ENST00000357008 DAZ4Q86SG3 579 aaKnown RBP11.5□□□□□ -0.57
CHD4-201ENST00000357008 AJUBAQ96IF1 538 aa11.5□□□□□ -0.57
CHD4-201ENST00000357008 DAZ3Q9NR90 486 aaKnown RBP11.5□□□□□ -0.57
CHD4-201ENST00000357008 IGHV4-59P01825 116 aa11.5□□□□□ -0.57
CHD4-201ENST00000357008 G3V4G9 280 aa11.5□□□□□ -0.57
CHD4-201ENST00000357008 ODF1Q14990 250 aa11.5□□□□□ -0.57
CHD4-201ENST00000357008 FRMD6-AS1P0C7T7 363 aa11.5□□□□□ -0.57
CHD4-201ENST00000357008 MED14OSP0DP75 135 aa11.5□□□□□ -0.57
CHD4-201ENST00000357008 ANAPC1Q9H1A4 1944 aa11.49□□□□□ -0.57
CHD4-201ENST00000357008 FAM236AA0A1B0GUQ0 79 aa11.49□□□□□ -0.57
CHD4-201ENST00000357008 FAM236BA0A1B0GV22 79 aa11.49□□□□□ -0.57
CHD4-201ENST00000357008 MED13Q9UHV7 2174 aa11.49□□□□□ -0.57
CHD4-201ENST00000357008 A0A1B0GX51 115 aa11.49□□□□□ -0.57
CHD4-201ENST00000357008 K7EQD1 137 aa11.49□□□□□ -0.57
CHD4-201ENST00000357008 RPL39P62891 51 aaKnown RBP11.49□□□□□ -0.57
CHD4-201ENST00000357008 OPRPNQ99935 248 aaPredicted RBP11.49□□□□□ -0.57
CHD4-201ENST00000357008 TRBV10-2A0A0K0K1G8 114 aa11.49□□□□□ -0.57
CHD4-201ENST00000357008 PRAC2D3DTV9 90 aa11.49□□□□□ -0.57
CHD4-201ENST00000357008 FUSP35637 526 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHD4-201ENST00000357008 C11orf86A6NJI1 115 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 IGLV2-23P01705 113 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 ATP6V0E2Q8NHE4 81 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 A0A0J9YY99 117 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 C19orf71A6NCJ1 209 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 TEX22C9J3V5 150 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 IGHG2P01859 326 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 H3BT86 120 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 Q6ZQT7 251 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 MGAMO43451 1857 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 HIST2H2BCQ6DN03 193 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 IGFL2Q6UWQ7 119 aa11.48□□□□□ -0.57
CHD4-201ENST00000357008 COX7B2Q8TF08 81 aa11.47□□□□□ -0.57
CHD4-201ENST00000357008 IGKV3D-7A0A0C4DH55 119 aa11.47□□□□□ -0.57
CHD4-201ENST00000357008 SPATA12Q7Z6I5 190 aa11.47□□□□□ -0.57
CHD4-201ENST00000357008 Q8N9W7 124 aa11.47□□□□□ -0.57
CHD4-201ENST00000357008 C2orf70A6NJV1 201 aa11.47□□□□□ -0.57
CHD4-201ENST00000357008 DEFB105AQ8NG35 78 aa11.47□□□□□ -0.57
CHD4-201ENST00000357008 C16orf74Q96GX8 76 aa11.47□□□□□ -0.57
CHD4-201ENST00000357008 H3BQ85 93 aa11.46□□□□□ -0.57
CHD4-201ENST00000357008 CCL24O00175 119 aa11.46□□□□□ -0.57
CHD4-201ENST00000357008 APRG1Q8IVJ8 170 aa11.46□□□□□ -0.57
CHD4-201ENST00000357008 IGKV2D-24A0A075B6R9 120 aa11.46□□□□□ -0.57
CHD4-201ENST00000357008 LGALS9O00182 355 aa11.46□□□□□ -0.58
CHD4-201ENST00000357008 Q8N1Y9 231 aa11.46□□□□□ -0.58
CHD4-201ENST00000357008 ODF3L1Q8IXM7 274 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms