RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 UFC1Q9Y3C8 167 aa13.27□□□□□ -0.28
NPAS3-202ENST00000356141 TRBV6-1A0A0K0K1D8 114 aa13.27□□□□□ -0.29
NPAS3-202ENST00000356141 Q0VG73 95 aa13.27□□□□□ -0.29
NPAS3-202ENST00000356141 RIGQ13278 110 aa13.27□□□□□ -0.29
NPAS3-202ENST00000356141 ATP5L2Q7Z4Y8 100 aa13.27□□□□□ -0.29
NPAS3-202ENST00000356141 GFRA4Q9GZZ7 299 aa13.27□□□□□ -0.29
NPAS3-202ENST00000356141 C2CD3Q4AC94 2353 aa13.27□□□□□ -0.29
NPAS3-202ENST00000356141 TRAV26-2A0A0B4J265 109 aa13.26□□□□□ -0.29
NPAS3-202ENST00000356141 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
NPAS3-202ENST00000356141 GNRH2O43555 120 aa13.26□□□□□ -0.29
NPAS3-202ENST00000356141 PAFAH1B2P68402 229 aa13.26□□□□□ -0.29
NPAS3-202ENST00000356141 ZNF324O75467 553 aaPredicted RBP13.26□□□□□ -0.29
NPAS3-202ENST00000356141 PRM2P04554 102 aa13.26□□□□□ -0.29
NPAS3-202ENST00000356141 CTRLP40313 264 aa13.26□□□□□ -0.29
NPAS3-202ENST00000356141 OR8A1Q8NGG7 326 aa13.26□□□□□ -0.29
NPAS3-202ENST00000356141 M0R381 172 aa13.25□□□□□ -0.29
NPAS3-202ENST00000356141 PMCHL2Q9BQD1 86 aa13.25□□□□□ -0.29
NPAS3-202ENST00000356141 TRAV12-3A0A0B4J271 114 aa13.24□□□□□ -0.29
NPAS3-202ENST00000356141 CD28P10747 220 aa13.24□□□□□ -0.29
NPAS3-202ENST00000356141 OR10J3Q5JRS4 329 aa13.24□□□□□ -0.29
NPAS3-202ENST00000356141 ADAMTSL5Q6ZMM2 481 aa13.24□□□□□ -0.29
NPAS3-202ENST00000356141 DLX4Q92988 240 aaPredicted RBP13.24□□□□□ -0.29
NPAS3-202ENST00000356141 DCANP1Q8TF63 244 aa13.24□□□□□ -0.29
NPAS3-202ENST00000356141 C2orf70A6NJV1 201 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 M0QXV9 152 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 NSD1Q96L73 2696 aaPredicted RBP13.23□□□□□ -0.29
NPAS3-202ENST00000356141 KNCNA6PVL3 124 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 SNAI2O43623 268 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 ELANEP08246 267 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 TCTAP57738 103 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 SMAGPQ0VAQ4 97 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 COX19Q49B96 90 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 PET117Q6UWS5 81 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 C9orf47Q6ZRZ4 202 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 ZFAND2AQ8N6M9 145 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 UBE2E2Q96LR5 201 aa13.23□□□□□ -0.29
NPAS3-202ENST00000356141 GEMIN7Q9H840 131 aaKnown RBP13.22□□□□□ -0.29
NPAS3-202ENST00000356141 ATRQ13535 2644 aa13.22□□□□□ -0.29
NPAS3-202ENST00000356141 IFI27P40305 119 aaPredicted RBP13.22□□□□□ -0.29
NPAS3-202ENST00000356141 SPINK13Q1W4C9 94 aa13.22□□□□□ -0.29
NPAS3-202ENST00000356141 ANXA2RQ3ZCQ2 193 aa13.22□□□□□ -0.29
NPAS3-202ENST00000356141 RASL11AQ6T310 242 aa13.22□□□□□ -0.29
NPAS3-202ENST00000356141 S100A4P26447 101 aaKnown RBP13.21□□□□□ -0.29
NPAS3-202ENST00000356141 MRPL51Q4U2R6 128 aaKnown RBP13.21□□□□□ -0.29
NPAS3-202ENST00000356141 C3orf79P0CE67 100 aa13.21□□□□□ -0.29
NPAS3-202ENST00000356141 SPANXN1Q5VSR9 72 aa13.21□□□□□ -0.29
NPAS3-202ENST00000356141 GTSF1LQ9H1H1 148 aa13.21□□□□□ -0.3
NPAS3-202ENST00000356141 TP73-AS1Q9UF72 201 aa13.21□□□□□ -0.3
NPAS3-202ENST00000356141 F8P00451 2351 aa13.2□□□□□ -0.3
NPAS3-202ENST00000356141 CKS2P33552 79 aa13.2□□□□□ -0.3
NPAS3-202ENST00000356141 PRSS3P2Q8NHM4 247 aa13.2□□□□□ -0.3
NPAS3-202ENST00000356141 RBAKDNA6NC62 111 aa13.2□□□□□ -0.3
NPAS3-202ENST00000356141 FAM231BA6NCW3 169 aa13.2□□□□□ -0.3
NPAS3-202ENST00000356141 IGLC6P0CF74 106 aa13.2□□□□□ -0.3
NPAS3-202ENST00000356141 AZU1P20160 251 aa13.2□□□□□ -0.3
NPAS3-202ENST00000356141 EBLN2Q6P2I7 272 aa13.2□□□□□ -0.3
NPAS3-202ENST00000356141 SPATA12Q7Z6I5 190 aa13.2□□□□□ -0.3
NPAS3-202ENST00000356141 APRG1Q8IVJ8 170 aa13.2□□□□□ -0.3
NPAS3-202ENST00000356141 MRPS16Q9Y3D3 137 aaKnown RBP13.2□□□□□ -0.3
NPAS3-202ENST00000356141 NPYP01303 97 aa13.19□□□□□ -0.3
NPAS3-202ENST00000356141 TRRAPQ9Y4A5 3859 aa13.19□□□□□ -0.3
NPAS3-202ENST00000356141 IGHV1-24A0A0C4DH33 117 aa13.19□□□□□ -0.3
NPAS3-202ENST00000356141 CKS1BP61024 79 aa13.19□□□□□ -0.3
NPAS3-202ENST00000356141 MPV17L2Q567V2 206 aa13.19□□□□□ -0.3
NPAS3-202ENST00000356141 Q8N976 141 aa13.19□□□□□ -0.3
NPAS3-202ENST00000356141 PRELID3AQ96N28 172 aa13.19□□□□□ -0.3
NPAS3-202ENST00000356141 TAX1BP3O14907 124 aa13.18□□□□□ -0.3
NPAS3-202ENST00000356141 RPS20P60866 119 aaKnown RBP13.18□□□□□ -0.3
NPAS3-202ENST00000356141 NSUN5P1Q3KNT7 163 aa13.18□□□□□ -0.3
NPAS3-202ENST00000356141 TMEM61Q8N0U2 210 aa13.18□□□□□ -0.3
NPAS3-202ENST00000356141 LINC01619G3V211 115 aa13.18□□□□□ -0.3
NPAS3-202ENST00000356141 G3V4G9 280 aa13.18□□□□□ -0.3
NPAS3-202ENST00000356141 CD5LO43866 347 aa13.18□□□□□ -0.3
NPAS3-202ENST00000356141 FAM104BQ5XKR9 115 aa13.18□□□□□ -0.3
NPAS3-202ENST00000356141 JPT2Q9H910 190 aa13.18□□□□□ -0.3
NPAS3-202ENST00000356141 NBEAL2Q6ZNJ1 2754 aa13.18□□□□□ -0.3
NPAS3-202ENST00000356141 OVOL1O14753 267 aa13.17□□□□□ -0.3
NPAS3-202ENST00000356141 DEFB131AP59861 70 aa13.17□□□□□ -0.3
NPAS3-202ENST00000356141 LINC01559Q495D7 138 aa13.17□□□□□ -0.3
NPAS3-202ENST00000356141 TRBV7-9A0A0J9YWB2 115 aa13.17□□□□□ -0.3
NPAS3-202ENST00000356141 LY6G6DO95868 133 aa13.17□□□□□ -0.3
NPAS3-202ENST00000356141 FOXC2Q99958 501 aa13.17□□□□□ -0.3
NPAS3-202ENST00000356141 K7EMT4 169 aa13.17□□□□□ -0.3
NPAS3-202ENST00000356141 TMEM160Q9NX00 188 aa13.17□□□□□ -0.3
NPAS3-202ENST00000356141 INAFM1C9JVW0 142 aa13.16□□□□□ -0.3
NPAS3-202ENST00000356141 KLF5Q13887 457 aaPredicted RBP13.16□□□□□ -0.3
NPAS3-202ENST00000356141 DYNLRB2Q8TF09 96 aa13.16□□□□□ -0.3
NPAS3-202ENST00000356141 LINC00477Q96M19 166 aa13.16□□□□□ -0.3
NPAS3-202ENST00000356141 MYOZ3Q8TDC0 251 aa13.16□□□□□ -0.3
NPAS3-202ENST00000356141 RAX2Q96IS3 184 aa13.16□□□□□ -0.3
NPAS3-202ENST00000356141 ZNF580Q9UK33 172 aa13.16□□□□□ -0.3
NPAS3-202ENST00000356141 NACAE9PAV3 2078 aa13.15□□□□□ -0.3
NPAS3-202ENST00000356141 ESDP10768 282 aa13.15□□□□□ -0.3
NPAS3-202ENST00000356141 SNRPD3P62318 126 aaKnown RBP13.15□□□□□ -0.3
NPAS3-202ENST00000356141 C14orf178Q8N769 122 aaPredicted RBP13.15□□□□□ -0.3
NPAS3-202ENST00000356141 LINC01006Q8NI28 216 aa13.15□□□□□ -0.3
NPAS3-202ENST00000356141 FAM110AQ9BQ89 295 aa13.15□□□□□ -0.3
NPAS3-202ENST00000356141 MGPP08493 103 aa13.15□□□□□ -0.3
NPAS3-202ENST00000356141 FA2HQ7L5A8 372 aa13.15□□□□□ -0.3
NPAS3-202ENST00000356141 OR9G4Q8NGQ1 327 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms