RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 RS1O15537 224 aa11.35□□□□□ -0.59
PDLIM7-201ENST00000355572 PFN1P07737 140 aaKnown RBP11.35□□□□□ -0.59
PDLIM7-201ENST00000355572 CRIP1P50238 77 aa11.35□□□□□ -0.59
PDLIM7-201ENST00000355572 NDFIP1Q9BT67 221 aa11.35□□□□□ -0.59
PDLIM7-201ENST00000355572 ZNF471Q9BX82 626 aaPredicted RBP11.35□□□□□ -0.59
PDLIM7-201ENST00000355572 S100A1P23297 94 aa11.34□□□□□ -0.59
PDLIM7-201ENST00000355572 SRIP30626 198 aa11.34□□□□□ -0.59
PDLIM7-201ENST00000355572 SMUG1Q53HV7 270 aa11.34□□□□□ -0.59
PDLIM7-201ENST00000355572 ZNF506Q5JVG8 444 aa11.34□□□□□ -0.59
PDLIM7-201ENST00000355572 CFAP126Q5VTH2 177 aa11.34□□□□□ -0.59
PDLIM7-201ENST00000355572 EIF5AL1Q6IS14 154 aaKnown RBP11.34□□□□□ -0.59
PDLIM7-201ENST00000355572 Q6ZSN1 163 aa11.34□□□□□ -0.59
PDLIM7-201ENST00000355572 Q86TA4 180 aa11.34□□□□□ -0.59
PDLIM7-201ENST00000355572 KCNS1Q96KK3 526 aa11.34□□□□□ -0.59
PDLIM7-201ENST00000355572 MED9Q9NWA0 146 aa11.34□□□□□ -0.59
PDLIM7-201ENST00000355572 PEX7O00628 323 aa11.33□□□□□ -0.6
PDLIM7-201ENST00000355572 ZNF876PQ49A33 203 aa11.33□□□□□ -0.6
PDLIM7-201ENST00000355572 JPT2Q9H910 190 aa11.33□□□□□ -0.6
PDLIM7-201ENST00000355572 Q9UF83 564 aa11.33□□□□□ -0.6
PDLIM7-201ENST00000355572 MAP1LC3B2A6NCE7 125 aa11.32□□□□□ -0.6
PDLIM7-201ENST00000355572 DNAH10OSP0CZ25 163 aa11.32□□□□□ -0.6
PDLIM7-201ENST00000355572 BTF3P20290 206 aaKnown RBP11.32□□□□□ -0.6
PDLIM7-201ENST00000355572 AKR1C8PQ5T2L2 129 aa11.32□□□□□ -0.6
PDLIM7-201ENST00000355572 SLC25A29Q8N8R3 303 aa11.32□□□□□ -0.6
PDLIM7-201ENST00000355572 ZC2HC1AQ96GY0 325 aa11.32□□□□□ -0.6
PDLIM7-201ENST00000355572 MAP1LC3BQ9GZQ8 125 aa11.32□□□□□ -0.6
PDLIM7-201ENST00000355572 K7EQM0 130 aa11.31□□□□□ -0.6
PDLIM7-201ENST00000355572 ORM1P02763 201 aa11.31□□□□□ -0.6
PDLIM7-201ENST00000355572 FBLL1A6NHQ2 334 aaKnown RBP11.3□□□□□ -0.6
PDLIM7-201ENST00000355572 ALKAL2Q6UX46 152 aa11.3□□□□□ -0.6
PDLIM7-201ENST00000355572 FAM210AQ96ND0 272 aa11.3□□□□□ -0.6
PDLIM7-201ENST00000355572 SAPCD1Q5SSQ6 148 aa11.29□□□□□ -0.6
PDLIM7-201ENST00000355572 Q8N3U1 123 aa11.29□□□□□ -0.6
PDLIM7-201ENST00000355572 PCNPQ8WW12 178 aaKnown RBP11.29□□□□□ -0.6
PDLIM7-201ENST00000355572 SAMD10Q9BYL1 202 aa11.29□□□□□ -0.6
PDLIM7-201ENST00000355572 A0A1B0GV50 99 aa11.28□□□□□ -0.6
PDLIM7-201ENST00000355572 GRIFINA4D1Z8 144 aa11.28□□□□□ -0.6
PDLIM7-201ENST00000355572 CDK2AP2O75956 126 aa11.28□□□□□ -0.6
PDLIM7-201ENST00000355572 UFSP1Q6NVU6 142 aa11.28□□□□□ -0.6
PDLIM7-201ENST00000355572 SLC7A5P1Q8MH63 180 aa11.28□□□□□ -0.6
PDLIM7-201ENST00000355572 NHLRC2Q8NBF2 726 aa11.28□□□□□ -0.6
PDLIM7-201ENST00000355572 PTH2Q96A98 100 aa11.28□□□□□ -0.6
PDLIM7-201ENST00000355572 PARLQ9H300 379 aa11.28□□□□□ -0.6
PDLIM7-201ENST00000355572 LY96Q9Y6Y9 160 aa11.28□□□□□ -0.6
PDLIM7-201ENST00000355572 M0R036 132 aa11.27□□□□□ -0.61
PDLIM7-201ENST00000355572 SH2D1AO60880 128 aa11.27□□□□□ -0.61
PDLIM7-201ENST00000355572 COX8CQ7Z4L0 72 aa11.27□□□□□ -0.61
PDLIM7-201ENST00000355572 TXNDC17Q9BRA2 123 aa11.27□□□□□ -0.61
PDLIM7-201ENST00000355572 FABP5P3A8MUU1 101 aa11.26□□□□□ -0.61
PDLIM7-201ENST00000355572 KRBOX1C9JBD0 128 aa11.26□□□□□ -0.61
PDLIM7-201ENST00000355572 H3BVH4 76 aa11.26□□□□□ -0.61
PDLIM7-201ENST00000355572 PAGE4O60829 102 aa11.26□□□□□ -0.61
PDLIM7-201ENST00000355572 SEC11BP0C7V7 166 aa11.26□□□□□ -0.61
PDLIM7-201ENST00000355572 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
PDLIM7-201ENST00000355572 DMRTA1Q5VZB9 504 aa11.26□□□□□ -0.61
PDLIM7-201ENST00000355572 HIST1H2BAQ96A08 127 aa11.26□□□□□ -0.61
PDLIM7-201ENST00000355572 TRBV6-4A0A1B0GX49 114 aa11.25□□□□□ -0.61
PDLIM7-201ENST00000355572 RAB5CP51148 216 aa11.25□□□□□ -0.61
PDLIM7-201ENST00000355572 C14orf178Q8N769 122 aaPredicted RBP11.25□□□□□ -0.61
PDLIM7-201ENST00000355572 FAM213BQ8TBF2 198 aa11.25□□□□□ -0.61
PDLIM7-201ENST00000355572 MBD3L1Q8WWY6 194 aa11.25□□□□□ -0.61
PDLIM7-201ENST00000355572 MSRB1Q9NZV6 116 aa11.25□□□□□ -0.61
PDLIM7-201ENST00000355572 A0A087WTM6 91 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 TMSB15BA0A087X1C1 80 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 B4DEV8 164 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 LTAP01374 205 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 ARMS2P0C7Q2 107 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 ASIPP42127 132 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 SULT1A2P50226 295 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 TIRAPP58753 221 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 RHOHQ15669 191 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 ZNF674Q2M3X9 581 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 DNLZQ5SXM8 178 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 CST9LP1Q5W188 147 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 COMMD7Q86VX2 200 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 MAPKAPK5-AS1Q8N8E1 139 aa11.24□□□□□ -0.61
PDLIM7-201ENST00000355572 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
PDLIM7-201ENST00000355572 CRYGDP07320 174 aa11.23□□□□□ -0.61
PDLIM7-201ENST00000355572 PPT1P50897 306 aa11.23□□□□□ -0.61
PDLIM7-201ENST00000355572 RPL19P84098 196 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-201ENST00000355572 SFT2D1Q8WV19 159 aa11.23□□□□□ -0.61
PDLIM7-201ENST00000355572 FMC1Q96HJ9 113 aa11.23□□□□□ -0.61
PDLIM7-201ENST00000355572 IL36BQ9NZH7 164 aa11.23□□□□□ -0.61
PDLIM7-201ENST00000355572 IGHV3-38A0A0C4DH36 116 aa11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 TRBV6-1A0A0K0K1D8 114 aa11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 GAGE12JA6NER3 117 aa11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 S100A4P26447 101 aaKnown RBP11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 BLOC1S1P78537 153 aa11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 CCL20P78556 96 aa11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 GAGE1Q13065 139 aa11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 GAGE4Q13068 117 aa11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 GAGE5Q13069 117 aa11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 GAGE13Q4V321 117 aa11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 PRADC1Q9BSG0 188 aa11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 NKX6-2Q9C056 277 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 ZFP30Q9Y2G7 519 aa11.22□□□□□ -0.61
PDLIM7-201ENST00000355572 UMAD1C9J7I0 102 aa11.21□□□□□ -0.61
PDLIM7-201ENST00000355572 IGHV3-30P01768 117 aa11.21□□□□□ -0.61
PDLIM7-201ENST00000355572 IGHV3-33P01772 117 aa11.21□□□□□ -0.61
PDLIM7-201ENST00000355572 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms