RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TMEM183AQ8IXX5 376 aa10.71□□□□□ -0.69
PDGFA-201ENST00000354513 ARL6IP6Q8N6S5 226 aa10.71□□□□□ -0.69
PDGFA-201ENST00000354513 TRGV4A0A0C4DH28 118 aa10.7□□□□□ -0.7
PDGFA-201ENST00000354513 TCRAP04437 139 aa10.7□□□□□ -0.7
PDGFA-201ENST00000354513 GYPEP15421 78 aa10.7□□□□□ -0.7
PDGFA-201ENST00000354513 TVP23CQ96ET8 276 aa10.7□□□□□ -0.7
PDGFA-201ENST00000354513 VAX2Q9UIW0 290 aa10.7□□□□□ -0.7
PDGFA-201ENST00000354513 LY96Q9Y6Y9 160 aa10.7□□□□□ -0.7
PDGFA-201ENST00000354513 RBFOX3A6NFN3 312 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 F6UZH7 168 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 K7EQM0 130 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 PEX7O00628 323 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 SRIP30626 198 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 TAGLN2P37802 199 aaKnown RBP10.69□□□□□ -0.7
PDGFA-201ENST00000354513 TDRG1Q3Y452 100 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 NFE4Q86UQ8 179 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 TXNDC17Q9BRA2 123 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 TCEAL7Q9BRU2 100 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 SPXQ9BT56 116 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 LENEPQ9Y5L5 61 aa10.69□□□□□ -0.7
PDGFA-201ENST00000354513 TRAV4A0A0B4J268 109 aa10.68□□□□□ -0.7
PDGFA-201ENST00000354513 IGHV3-16A0A0C4DH30 117 aa10.68□□□□□ -0.7
PDGFA-201ENST00000354513 SERTM2A0A1B0GWG4 89 aa10.68□□□□□ -0.7
PDGFA-201ENST00000354513 MEF2BQ02080 365 aaPredicted RBP10.68□□□□□ -0.7
PDGFA-201ENST00000354513 TOR2AQ5JU69 321 aa10.68□□□□□ -0.7
PDGFA-201ENST00000354513 CLLU1Q5K131 121 aa10.68□□□□□ -0.7
PDGFA-201ENST00000354513 Q5VSD8 79 aa10.68□□□□□ -0.7
PDGFA-201ENST00000354513 CYB561D1Q8N8Q1 229 aa10.68□□□□□ -0.7
PDGFA-201ENST00000354513 HIST1H2BAQ96A08 127 aa10.68□□□□□ -0.7
PDGFA-201ENST00000354513 TRGV11A0A075B6L2 103 aa10.67□□□□□ -0.7
PDGFA-201ENST00000354513 SCO2A0A1W2PP80 73 aa10.67□□□□□ -0.7
PDGFA-201ENST00000354513 EREGO14944 169 aa10.67□□□□□ -0.7
PDGFA-201ENST00000354513 GNRH2O43555 120 aa10.67□□□□□ -0.7
PDGFA-201ENST00000354513 TYMSP04818 313 aa10.67□□□□□ -0.7
PDGFA-201ENST00000354513 ZNF506Q5JVG8 444 aa10.67□□□□□ -0.7
PDGFA-201ENST00000354513 FAM210AQ96ND0 272 aa10.67□□□□□ -0.7
PDGFA-201ENST00000354513 EIF5A2Q9GZV4 153 aaKnown RBP10.67□□□□□ -0.7
PDGFA-201ENST00000354513 TRAV8-1A0A0A6YYK1 113 aa10.66□□□□□ -0.7
PDGFA-201ENST00000354513 ORM1P02763 201 aa10.66□□□□□ -0.7
PDGFA-201ENST00000354513 INAFM2P0DMQ5 153 aa10.66□□□□□ -0.7
PDGFA-201ENST00000354513 AKR1C3P42330 323 aa10.66□□□□□ -0.7
PDGFA-201ENST00000354513 FAM159AQ6UWV7 190 aa10.66□□□□□ -0.7
PDGFA-201ENST00000354513 SGK494Q96LW2 274 aa10.66□□□□□ -0.7
PDGFA-201ENST00000354513 NAGKQ9UJ70 344 aa10.66□□□□□ -0.7
PDGFA-201ENST00000354513 SRRM2Q9UQ35 2752 aaKnown RBP10.66□□□□□ -0.7
PDGFA-201ENST00000354513 TRAV34A0A0B4J273 112 aa10.65□□□□□ -0.7
PDGFA-201ENST00000354513 LRCOL1A6NCL2 159 aa10.65□□□□□ -0.7
PDGFA-201ENST00000354513 PDE6DO43924 150 aa10.65□□□□□ -0.7
PDGFA-201ENST00000354513 HAMPP81172 84 aa10.65□□□□□ -0.7
PDGFA-201ENST00000354513 TMEM75Q8N9X5 138 aa10.65□□□□□ -0.7
PDGFA-201ENST00000354513 LINC00479Q96M42 142 aa10.65□□□□□ -0.7
PDGFA-201ENST00000354513 TRAV9-2A0A087WT02 112 aa10.64□□□□□ -0.71
PDGFA-201ENST00000354513 C9JCJ5 164 aa10.64□□□□□ -0.71
PDGFA-201ENST00000354513 K7EP13 123 aa10.64□□□□□ -0.71
PDGFA-201ENST00000354513 M0R2P5 195 aa10.64□□□□□ -0.71
PDGFA-201ENST00000354513 CRYGDP07320 174 aa10.64□□□□□ -0.71
PDGFA-201ENST00000354513 GATA1P15976 413 aaPredicted RBP10.64□□□□□ -0.71
PDGFA-201ENST00000354513 EVI2AP22794 236 aa10.64□□□□□ -0.71
PDGFA-201ENST00000354513 C11orf52Q96A22 123 aa10.64□□□□□ -0.71
PDGFA-201ENST00000354513 PSG8Q9UQ74 426 aa10.64□□□□□ -0.71
PDGFA-201ENST00000354513 FBLL1A6NHQ2 334 aaKnown RBP10.63□□□□□ -0.71
PDGFA-201ENST00000354513 IGLV2-11P01706 119 aa10.63□□□□□ -0.71
PDGFA-201ENST00000354513 UBE2G1P62253 170 aa10.63□□□□□ -0.71
PDGFA-201ENST00000354513 FLI1Q01543 452 aaPredicted RBP10.63□□□□□ -0.71
PDGFA-201ENST00000354513 PRNTQ86SH4 94 aa10.63□□□□□ -0.71
PDGFA-201ENST00000354513 OR4C5Q8NGB2 326 aa10.63□□□□□ -0.71
PDGFA-201ENST00000354513 FMC1Q96HJ9 113 aa10.63□□□□□ -0.71
PDGFA-201ENST00000354513 MED9Q9NWA0 146 aa10.63□□□□□ -0.71
PDGFA-201ENST00000354513 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
PDGFA-201ENST00000354513 SMR3BP02814 79 aaPredicted RBP10.62□□□□□ -0.71
PDGFA-201ENST00000354513 GCSHP23434 173 aa10.62□□□□□ -0.71
PDGFA-201ENST00000354513 TIRAPP58753 221 aa10.62□□□□□ -0.71
PDGFA-201ENST00000354513 PEA15Q15121 130 aa10.62□□□□□ -0.71
PDGFA-201ENST00000354513 NDFIP1Q9BT67 221 aa10.62□□□□□ -0.71
PDGFA-201ENST00000354513 DMBT1Q9UGM3 2413 aaPredicted RBP10.61□□□□□ -0.71
PDGFA-201ENST00000354513 TRAV21A0A0B4J279 112 aa10.61□□□□□ -0.71
PDGFA-201ENST00000354513 S100A9P06702 114 aaKnown RBP10.61□□□□□ -0.71
PDGFA-201ENST00000354513 ZNF80P51504 273 aaPredicted RBP10.61□□□□□ -0.71
PDGFA-201ENST00000354513 Q86TA4 180 aa10.61□□□□□ -0.71
PDGFA-201ENST00000354513 DERL1Q9BUN8 251 aa10.61□□□□□ -0.71
PDGFA-201ENST00000354513 TREM1Q9NP99 234 aa10.61□□□□□ -0.71
PDGFA-201ENST00000354513 TRBV6-1A0A0K0K1D8 114 aa10.6□□□□□ -0.71
PDGFA-201ENST00000354513 TMEM250H0YL14 139 aa10.6□□□□□ -0.71
PDGFA-201ENST00000354513 RPL35P42766 123 aaKnown RBP10.6□□□□□ -0.71
PDGFA-201ENST00000354513 CEBPGP53567 150 aa10.6□□□□□ -0.71
PDGFA-201ENST00000354513 SRSF3P84103 164 aaKnown RBP10.6□□□□□ -0.71
PDGFA-201ENST00000354513 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
PDGFA-201ENST00000354513 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
PDGFA-201ENST00000354513 FRZBQ92765 325 aa10.6□□□□□ -0.71
PDGFA-201ENST00000354513 IGHV3-38A0A0C4DH36 116 aa10.59□□□□□ -0.71
PDGFA-201ENST00000354513 RAB19A4D1S5 217 aa10.59□□□□□ -0.71
PDGFA-201ENST00000354513 IBA57-AS1B1ANH7 110 aa10.59□□□□□ -0.71
PDGFA-201ENST00000354513 RS1O15537 224 aa10.59□□□□□ -0.71
PDGFA-201ENST00000354513 NDUFS6O75380 124 aaKnown RBP10.59□□□□□ -0.71
PDGFA-201ENST00000354513 SRP19P09132 144 aaKnown RBP10.59□□□□□ -0.71
PDGFA-201ENST00000354513 SAPCD1Q5SSQ6 148 aa10.59□□□□□ -0.71
PDGFA-201ENST00000354513 CFAP126Q5VTH2 177 aa10.59□□□□□ -0.71
PDGFA-201ENST00000354513 C10orf126Q8N4M7 172 aa10.59□□□□□ -0.71
PDGFA-201ENST00000354513 SDF2L1Q9HCN8 221 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms