RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 JMJD7-PLA2G4BH0Y9G9 81 aa3.99□□□□□ -1.77
SKP1-202ENST00000353411 CRLF1O75462 422 aa3.99□□□□□ -1.77
SKP1-202ENST00000353411 DEFB124Q8NES8 71 aa3.99□□□□□ -1.77
SKP1-202ENST00000353411 PKD1L2Q7Z442 2459 aa3.99□□□□□ -1.77
SKP1-202ENST00000353411 ZNF876PQ49A33 203 aa3.99□□□□□ -1.77
SKP1-202ENST00000353411 TTTY13Q9BZ97 58 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 TRBV30A0A0K0K1B3 111 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 MBD6Q96DN6 1003 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 JPT2Q9H910 190 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 COL4A5P29400 1685 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 ANKHD1Q8IWZ3 2542 aaKnown RBP3.98□□□□□ -1.77
SKP1-202ENST00000353411 IGHV5-10-1A0A0J9YXX1 117 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 LYRM9A8MSI8 78 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 DAD1P61803 113 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 GDF5OSQ5U4N7 250 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 FANCD2OSQ96PS1 177 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 PCOLCEQ15113 449 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 IGLV3-12A0A075B6K2 115 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 EFNA2O43921 213 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 ODF3L1Q8IXM7 274 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 PRORYQ9H606 182 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 GOLGB1Q14789 3259 aaKnown RBP3.98□□□□□ -1.77
SKP1-202ENST00000353411 SDHAF1A6NFY7 115 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 H3BRN7 92 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 NBL1P41271 181 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 SLC25A45Q8N413 288 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 DPM3Q9P2X0 92 aa3.98□□□□□ -1.77
SKP1-202ENST00000353411 IGLV2-8P01709 118 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 C10orf105Q8TEF2 133 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 FAM167A-AS1Q96KT0 104 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 TMEM200BQ69YZ2 307 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 BAALCQ8WXS3 180 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 CDIP1Q9H305 208 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 IGHV1OR15-9A0A0B4J2B8 117 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 MLANAQ16655 118 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 MTORP42345 2549 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 TRAV26-2A0A0B4J265 109 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 ASPHD1Q5U4P2 390 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 DTX1Q86Y01 620 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 KLHL30-AS1Q8NEE0 82 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 TRAV12-2A0A075B6T6 113 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 IGKV1-16P04430 117 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 AGPAT4-IT1Q9H0P7 198 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 ADARB2-AS1A8MUL3 147 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 C20orf197Q8N268 126 aa3.97□□□□□ -1.77
SKP1-202ENST00000353411 CELA2AP08217 269 aa3.96□□□□□ -1.77
SKP1-202ENST00000353411 U3KQK5 164 aa3.96□□□□□ -1.77
SKP1-202ENST00000353411 EGR2P11161 476 aaPredicted RBP3.96□□□□□ -1.78
SKP1-202ENST00000353411 WFDC11Q8NEX6 87 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 TIMM17AQ99595 171 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 SPRY4Q9C004 299 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 MDFICQ9P1T7 246 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 CPAMD8Q8IZJ3 1885 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 IGHV3-66A0A0C4DH42 116 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 LINC00205P59089 165 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 FAM216BQ8N7L0 139 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 C10orf55Q5SWW7 151 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 CD177Q8N6Q3 437 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 GP9P14770 177 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 ERCC8Q13216 396 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 GFRALQ6UXV0 394 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 TNRC6BQ9UPQ9 1833 aaKnown RBP3.96□□□□□ -1.78
SKP1-202ENST00000353411 MRPS12O15235 138 aaKnown RBP3.96□□□□□ -1.78
SKP1-202ENST00000353411 GATA4P43694 442 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 DYNAPQ8N1N2 210 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 PLA2G2FQ9BZM2 168 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 LENEPQ9Y5L5 61 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 IGHV3-35A0A0C4DH35 117 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 DEFB109BQ30KR1 87 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 DAND5Q8N907 189 aa3.96□□□□□ -1.78
SKP1-202ENST00000353411 IGLV3-19P01714 112 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 IGHV3-23P01764 117 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 IGHG3P01860 377 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 S4R3C0 116 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 IGHV3OR16-13A0A075B7E8 117 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 IGHV3-74A0A0B4J1X5 117 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 TIMM17BO60830 172 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 CLEC19AQ6UXS0 136 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 CLEC2BQ92478 149 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 IGKV3OR2-268A0A0C4DH90 116 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 LOC107984640A0A0U1RRK4 108 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 BUB3O43684 328 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 PDE6GP18545 87 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 UBE2D3P61077 147 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 UBE2D2P62837 147 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 SDIM1Q6ZPB5 146 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 IGKV2D-26A0A0A0MRZ7 120 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 COX7A2LO14548 114 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 ZNF833PQ6ZTB9 187 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 C16orf97H3BN30 126 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 IGHV3-33P01772 117 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 TFF2Q03403 129 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 C6orf226Q5I0X4 101 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 ANKRD11Q6UB99 2663 aaPredicted RBP3.95□□□□□ -1.78
SKP1-202ENST00000353411 TRBV7-3A0A075B6L6 115 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 TRBV7-7A0A0K0K1E9 115 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 TRBV7-1A0A0A6YYK4 115 aa3.95□□□□□ -1.78
SKP1-202ENST00000353411 MBD3L4A6NDZ8 208 aaPredicted RBP3.95□□□□□ -1.78
SKP1-202ENST00000353411 MBD3L3A6NE82 208 aaPredicted RBP3.95□□□□□ -1.78
SKP1-202ENST00000353411 SRRM4A7MD48 611 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms