RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 TM2D3Q9BRN9 247 aa19.48■□□□□ 0.71
SSBP4-202ENST00000348495 TPPP3Q9BW30 176 aa19.48■□□□□ 0.71
SSBP4-202ENST00000348495 CNFNQ9BYD5 112 aa19.48■□□□□ 0.71
SSBP4-202ENST00000348495 URGCP-MRPS24S4R325 110 aa19.48■□□□□ 0.71
SSBP4-202ENST00000348495 MEGF8Q7Z7M0 2845 aa19.48■□□□□ 0.71
SSBP4-202ENST00000348495 F2Z2F3 143 aa19.48■□□□□ 0.71
SSBP4-202ENST00000348495 DEFA6Q01524 100 aa19.48■□□□□ 0.71
SSBP4-202ENST00000348495 KCNIP4Q6PIL6 250 aa19.48■□□□□ 0.71
SSBP4-202ENST00000348495 YPEL4Q96NS1 127 aa19.47■□□□□ 0.71
SSBP4-202ENST00000348495 TIMM8BQ9Y5J9 83 aaPredicted RBP19.47■□□□□ 0.71
SSBP4-202ENST00000348495 S100PP25815 95 aa19.46■□□□□ 0.71
SSBP4-202ENST00000348495 MIFP14174 115 aa19.45■□□□□ 0.7
SSBP4-202ENST00000348495 ELOBQ15370 118 aa19.45■□□□□ 0.7
SSBP4-202ENST00000348495 OR10AG1Q8NH19 301 aa19.45■□□□□ 0.7
SSBP4-202ENST00000348495 MUC4Q99102 2169 aa19.45■□□□□ 0.7
SSBP4-202ENST00000348495 Q8NAQ8 132 aa19.45■□□□□ 0.7
SSBP4-202ENST00000348495 TRAV9-1A0A075B6T8 112 aa19.44■□□□□ 0.7
SSBP4-202ENST00000348495 B9D2Q9BPU9 175 aa19.44■□□□□ 0.7
SSBP4-202ENST00000348495 SPATA25Q9BR10 227 aa19.44■□□□□ 0.7
SSBP4-202ENST00000348495 MUC21A0A0G2JKD1 596 aa19.43■□□□□ 0.7
SSBP4-202ENST00000348495 MUC21A0A140T8X8 626 aa19.43■□□□□ 0.7
SSBP4-202ENST00000348495 NXPH4O95158 308 aa19.43■□□□□ 0.7
SSBP4-202ENST00000348495 WDR73Q6P4I2 378 aa19.43■□□□□ 0.7
SSBP4-202ENST00000348495 SPXQ9BT56 116 aa19.43■□□□□ 0.7
SSBP4-202ENST00000348495 PHLDA3Q9Y5J5 127 aa19.43■□□□□ 0.7
SSBP4-202ENST00000348495 IGHV4-4A0A075B6R2 117 aa19.42■□□□□ 0.7
SSBP4-202ENST00000348495 IGHV4-28A0A0C4DH34 117 aa19.42■□□□□ 0.7
SSBP4-202ENST00000348495 DAZ2Q13117 558 aaKnown RBP19.42■□□□□ 0.7
SSBP4-202ENST00000348495 BTF3L4Q96K17 158 aa19.42■□□□□ 0.7
SSBP4-202ENST00000348495 A0A1B0GUT8 65 aa19.42■□□□□ 0.7
SSBP4-202ENST00000348495 SPINK4O60575 86 aa19.41■□□□□ 0.7
SSBP4-202ENST00000348495 CACNG7P62955 275 aa19.41■□□□□ 0.7
SSBP4-202ENST00000348495 SNURFLB1AK76 121 aa19.4■□□□□ 0.7
SSBP4-202ENST00000348495 PTH2Q96A98 100 aa19.4■□□□□ 0.7
SSBP4-202ENST00000348495 TRBV24-1A0A075B6N3 115 aa19.39■□□□□ 0.7
SSBP4-202ENST00000348495 M0R2P5 195 aa19.39■□□□□ 0.7
SSBP4-202ENST00000348495 DMRTA1Q5VZB9 504 aa19.39■□□□□ 0.7
SSBP4-202ENST00000348495 TGIF2-C20orf24A0A0A6YYL0 155 aa19.39■□□□□ 0.69
SSBP4-202ENST00000348495 A0A1B0GXF2 115 aa19.39■□□□□ 0.69
SSBP4-202ENST00000348495 NTF3P20783 257 aa19.39■□□□□ 0.69
SSBP4-202ENST00000348495 SPANXN1Q5VSR9 72 aa19.39■□□□□ 0.69
SSBP4-202ENST00000348495 ATP5L2Q7Z4Y8 100 aa19.39■□□□□ 0.69
SSBP4-202ENST00000348495 BORCS7Q96B45 105 aa19.39■□□□□ 0.69
SSBP4-202ENST00000348495 TENM3Q9P273 2699 aa19.38■□□□□ 0.69
SSBP4-202ENST00000348495 M0R381 172 aa19.38■□□□□ 0.69
SSBP4-202ENST00000348495 SSTP61278 116 aa19.38■□□□□ 0.69
SSBP4-202ENST00000348495 ZFP82Q8N141 532 aa19.38■□□□□ 0.69
SSBP4-202ENST00000348495 NOP10Q9NPE3 64 aaKnown RBP19.38■□□□□ 0.69
SSBP4-202ENST00000348495 MSRB1Q9NZV6 116 aa19.38■□□□□ 0.69
SSBP4-202ENST00000348495 PIK3CD-AS1Q5SR53 167 aa19.37■□□□□ 0.69
SSBP4-202ENST00000348495 MRPL54Q6P161 138 aaKnown RBP19.37■□□□□ 0.69
SSBP4-202ENST00000348495 EMP1P54849 157 aa19.37■□□□□ 0.69
SSBP4-202ENST00000348495 RIGQ13278 110 aa19.37■□□□□ 0.69
SSBP4-202ENST00000348495 LGALS9BQ3B8N2 356 aa19.37■□□□□ 0.69
SSBP4-202ENST00000348495 ZNF876PQ49A33 203 aa19.37■□□□□ 0.69
SSBP4-202ENST00000348495 DEFB4AO15263 64 aa19.36■□□□□ 0.69
SSBP4-202ENST00000348495 TWIST1Q15672 202 aa19.36■□□□□ 0.69
SSBP4-202ENST00000348495 RASL10AQ92737 203 aa19.36■□□□□ 0.69
SSBP4-202ENST00000348495 SYT8Q8NBV8 401 aa19.35■□□□□ 0.69
SSBP4-202ENST00000348495 COLCA2A8K830 154 aa19.34■□□□□ 0.69
SSBP4-202ENST00000348495 HBBP68871 147 aa19.34■□□□□ 0.69
SSBP4-202ENST00000348495 MRPL16Q9NX20 251 aaKnown RBP19.34■□□□□ 0.69
SSBP4-202ENST00000348495 A0A1B0GW15 77 aa19.34■□□□□ 0.69
SSBP4-202ENST00000348495 Q6ZTI0 123 aa19.34■□□□□ 0.69
SSBP4-202ENST00000348495 NDUFAF3Q9BU61 184 aa19.34■□□□□ 0.69
SSBP4-202ENST00000348495 RASL11AQ6T310 242 aa19.33■□□□□ 0.68
SSBP4-202ENST00000348495 FAM210BQ96KR6 192 aa19.33■□□□□ 0.68
SSBP4-202ENST00000348495 C11orf68Q9H3H3 251 aaKnown RBP19.33■□□□□ 0.68
SSBP4-202ENST00000348495 ZMAT4Q9H898 229 aa19.33■□□□□ 0.68
SSBP4-202ENST00000348495 TRGV1A0A0A0MS02 117 aa19.32■□□□□ 0.68
SSBP4-202ENST00000348495 LINC00612Q8N6U2 182 aa19.32■□□□□ 0.68
SSBP4-202ENST00000348495 CAMPP49913 170 aa19.31■□□□□ 0.68
SSBP4-202ENST00000348495 GATD1Q8NB37 220 aa19.31■□□□□ 0.68
SSBP4-202ENST00000348495 DKK2Q9UBU2 259 aa19.31■□□□□ 0.68
SSBP4-202ENST00000348495 LYRM9A8MSI8 78 aa19.31■□□□□ 0.68
SSBP4-202ENST00000348495 FAM222AQ5U5X8 452 aa19.3■□□□□ 0.68
SSBP4-202ENST00000348495 JPT2Q9H910 190 aa19.3■□□□□ 0.68
SSBP4-202ENST00000348495 DNAH9Q9NYC9 4486 aa19.3■□□□□ 0.68
SSBP4-202ENST00000348495 HUWE1Q7Z6Z7 4374 aaKnown RBP19.29■□□□□ 0.68
SSBP4-202ENST00000348495 S100A8P05109 93 aa19.28■□□□□ 0.68
SSBP4-202ENST00000348495 AP1S3Q96PC3 154 aa19.28■□□□□ 0.68
SSBP4-202ENST00000348495 TRGC1P0CF51 173 aa19.28■□□□□ 0.68
SSBP4-202ENST00000348495 NHLRC4P0CG21 123 aaPredicted RBP19.28■□□□□ 0.68
SSBP4-202ENST00000348495 EVI2AP22794 236 aa19.28■□□□□ 0.68
SSBP4-202ENST00000348495 TMEM191AQ9H0A3 160 aa19.28■□□□□ 0.68
SSBP4-202ENST00000348495 CELA1Q9UNI1 258 aa19.27■□□□□ 0.68
SSBP4-202ENST00000348495 KIF25-AS1Q9Y6Z4 181 aa19.27■□□□□ 0.68
SSBP4-202ENST00000348495 PRKDCP78527 4128 aaKnown RBP19.27■□□□□ 0.67
SSBP4-202ENST00000348495 GAGE12BA1L429 117 aa19.26■□□□□ 0.67
SSBP4-202ENST00000348495 A8MWV9 139 aa19.26■□□□□ 0.67
SSBP4-202ENST00000348495 GAGE7O76087 117 aa19.26■□□□□ 0.67
SSBP4-202ENST00000348495 GAGE12FP0CL80 117 aa19.26■□□□□ 0.67
SSBP4-202ENST00000348495 GAGE12GP0CL81 117 aa19.26■□□□□ 0.67
SSBP4-202ENST00000348495 GAGE12IP0CL82 117 aa19.26■□□□□ 0.67
SSBP4-202ENST00000348495 TMEM136Q6ZRR5 245 aa19.26■□□□□ 0.67
SSBP4-202ENST00000348495 POM121L12Q8N7R1 296 aa19.26■□□□□ 0.67
SSBP4-202ENST00000348495 A0A0J9YWU9 116 aa19.25■□□□□ 0.67
SSBP4-202ENST00000348495 CRYGDP07320 174 aa19.25■□□□□ 0.67
SSBP4-202ENST00000348495 SPART-AS1P0CW21 52 aa19.25■□□□□ 0.67
SSBP4-202ENST00000348495 COX19Q49B96 90 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms