RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 TANC2Q9HCD6 1990 aa9.38□□□□□ -0.91
TRAF3-201ENST00000347662 PRSS46E5RG02 174 aa9.38□□□□□ -0.91
TRAF3-201ENST00000347662 APRG1Q8IVJ8 170 aa9.38□□□□□ -0.91
TRAF3-201ENST00000347662 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
TRAF3-201ENST00000347662 DEFB136Q30KP8 78 aa9.37□□□□□ -0.91
TRAF3-201ENST00000347662 MRPL27Q9P0M9 148 aaKnown RBP9.37□□□□□ -0.91
TRAF3-201ENST00000347662 TLN2Q9Y4G6 2542 aa9.37□□□□□ -0.91
TRAF3-201ENST00000347662 NDUFB8O95169 186 aa9.37□□□□□ -0.91
TRAF3-201ENST00000347662 NMSQ5H8A3 153 aa9.37□□□□□ -0.91
TRAF3-201ENST00000347662 FAM110AQ9BQ89 295 aa9.37□□□□□ -0.91
TRAF3-201ENST00000347662 NCOA6Q14686 2063 aaPredicted RBP9.37□□□□□ -0.91
TRAF3-201ENST00000347662 MYO9AB2RTY4 2548 aa9.37□□□□□ -0.91
TRAF3-201ENST00000347662 IGKV2-24A0A0C4DH68 120 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 IGLV3-9A0A075B6K5 115 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 ARTNQ5T4W7 220 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 Q6ZWC4 215 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 OPRPNQ99935 248 aaPredicted RBP9.36□□□□□ -0.91
TRAF3-201ENST00000347662 JMJD1CQ15652 2540 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 GP9P14770 177 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 PDE6HQ13956 83 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 WFDC11Q8NEX6 87 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 GRNP28799 593 aaKnown RBP9.36□□□□□ -0.91
TRAF3-201ENST00000347662 PRR20EP86478 221 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 PRR20CP86479 221 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 PRR20DP86480 221 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 PRR20BP86481 221 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 PRR20AP86496 221 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 IGFL3Q6UXB1 125 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 MED12LQ86YW9 2145 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 GFRA4Q9GZZ7 299 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 IGKV1D-17A0A075B6S4 117 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 UBE2D1P51668 147 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 RNF144BQ7Z419 303 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 SPTBN4Q9H254 2564 aa9.36□□□□□ -0.91
TRAF3-201ENST00000347662 IGKV1-6A0A0C4DH72 117 aa9.35□□□□□ -0.91
TRAF3-201ENST00000347662 WIPF3A6NGB9 483 aa9.35□□□□□ -0.91
TRAF3-201ENST00000347662 DSCAML1Q8TD84 2053 aa9.35□□□□□ -0.91
TRAF3-201ENST00000347662 TRBV12-3P01733 135 aa9.35□□□□□ -0.91
TRAF3-201ENST00000347662 NDUFS7O75251 213 aa9.35□□□□□ -0.91
TRAF3-201ENST00000347662 MRPL35Q9NZE8 188 aaKnown RBP9.35□□□□□ -0.91
TRAF3-201ENST00000347662 IGKV1-16P04430 117 aa9.35□□□□□ -0.91
TRAF3-201ENST00000347662 IGLC2P0DOY2 106 aa9.35□□□□□ -0.91
TRAF3-201ENST00000347662 IGLC3P0DOY3 106 aa9.35□□□□□ -0.91
TRAF3-201ENST00000347662 PNRC2Q9NPJ4 139 aaKnown RBP9.35□□□□□ -0.91
TRAF3-201ENST00000347662 TMEM61Q8N0U2 210 aa9.35□□□□□ -0.91
TRAF3-201ENST00000347662 ZNF462Q96JM2 2506 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 A0A1B0GW64 132 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 KIR2DL5BQ8NHK3 375 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 ZNF581Q9P0T4 197 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 LINC00473A8K010 186 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 DEFB4AO15263 64 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 SERP1Q9Y6X1 66 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 TAX1BP3O14907 124 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 SND1-IT1Q9HBX3 110 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-201ENST00000347662 CEP192Q8TEP8 1941 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 C9JQL5 133 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 NDUFA4O00483 81 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 ATP6V0E2Q8NHE4 81 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 SPANXCQ9NY87 97 aa9.34□□□□□ -0.91
TRAF3-201ENST00000347662 LOC105371267A0A1B0GV96 52 aa9.34□□□□□ -0.92
TRAF3-201ENST00000347662 ZC2HC1AQ96GY0 325 aa9.34□□□□□ -0.92
TRAF3-201ENST00000347662 A0A1W2PPM0 123 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 GNRH2O43555 120 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 IGHV4-30-2A0A087WSY4 118 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 NDUFA1O15239 70 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 MPZP25189 248 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 NAV2Q8IVL1 2488 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 NPSP0C0P6 89 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 PCNX3Q9H6A9 2034 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 A0A0B4J2C4 111 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 A0A0U1RQV1 116 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 PLXNA2O75051 1894 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 IGHV4-30-4P0DP06 118 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 IGHV4-31P0DP07 118 aa9.33□□□□□ -0.92
TRAF3-201ENST00000347662 IGHV2-70DA0A0C4DH43 119 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 K7EP13 123 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 NRGNQ92686 78 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 REG4Q9BYZ8 158 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 SIGLEC8Q9NYZ4 499 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 CHD8Q9HCK8 2581 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 WISP1O95388 367 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 CFPP27918 469 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 TRBV10-2A0A0K0K1G8 114 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 ELANEP08246 267 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 RETNQ9HD89 108 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 PROK2Q9HC23 129 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 TRBV24-1A0A075B6N3 115 aa9.32□□□□□ -0.92
TRAF3-201ENST00000347662 ASPHD1Q5U4P2 390 aa9.31□□□□□ -0.92
TRAF3-201ENST00000347662 WFDC10BQ8IUB3 73 aa9.31□□□□□ -0.92
TRAF3-201ENST00000347662 TNRC6AQ8NDV7 1962 aaKnown RBP9.31□□□□□ -0.92
TRAF3-201ENST00000347662 J3QLI3 93 aa9.31□□□□□ -0.92
TRAF3-201ENST00000347662 LINC01620Q4KN68 170 aa9.31□□□□□ -0.92
TRAF3-201ENST00000347662 F8VRH5 84 aa9.31□□□□□ -0.92
TRAF3-201ENST00000347662 FAM215AQ9Y5M1 114 aa9.31□□□□□ -0.92
TRAF3-201ENST00000347662 ARHGAP21Q5T5U3 1957 aa9.31□□□□□ -0.92
TRAF3-201ENST00000347662 H3BQ85 93 aa9.31□□□□□ -0.92
TRAF3-201ENST00000347662 C16orf74Q96GX8 76 aa9.31□□□□□ -0.92
TRAF3-201ENST00000347662 UTRNP46939 3433 aa9.31□□□□□ -0.92
TRAF3-201ENST00000347662 FAM236AA0A1B0GUQ0 79 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms