RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 WT1-ASQ06250 92 aa10.77□□□□□ -0.68
TRIO-202ENST00000344204 KLHL30-AS1Q8NEE0 82 aa10.77□□□□□ -0.68
TRIO-202ENST00000344204 NDPQ00604 133 aa10.77□□□□□ -0.68
TRIO-202ENST00000344204 THBDP07204 575 aa10.77□□□□□ -0.69
TRIO-202ENST00000344204 C8orf31Q8N9H6 132 aa10.77□□□□□ -0.69
TRIO-202ENST00000344204 Q6ZS92 163 aa10.77□□□□□ -0.69
TRIO-202ENST00000344204 FAM167A-AS1Q96KT0 104 aa10.77□□□□□ -0.69
TRIO-202ENST00000344204 FAM240AA0A1B0GVK7 77 aa10.77□□□□□ -0.69
TRIO-202ENST00000344204 GDF5OSQ5U4N7 250 aa10.77□□□□□ -0.69
TRIO-202ENST00000344204 GP9P14770 177 aa10.76□□□□□ -0.69
TRIO-202ENST00000344204 ATP5EP2Q5VTU8 51 aa10.76□□□□□ -0.69
TRIO-202ENST00000344204 C15orf65H3BRN8 121 aa10.76□□□□□ -0.69
TRIO-202ENST00000344204 PRR30Q53SZ7 412 aaPredicted RBP10.76□□□□□ -0.69
TRIO-202ENST00000344204 BAALCQ8WXS3 180 aa10.76□□□□□ -0.69
TRIO-202ENST00000344204 CXCL5P42830 114 aa10.76□□□□□ -0.69
TRIO-202ENST00000344204 TRIP6Q15654 476 aaKnown RBP10.76□□□□□ -0.69
TRIO-202ENST00000344204 ARTNQ5T4W7 220 aa10.76□□□□□ -0.69
TRIO-202ENST00000344204 IMUPQ9GZP8 106 aa10.75□□□□□ -0.69
TRIO-202ENST00000344204 DKK1O94907 266 aa10.75□□□□□ -0.69
TRIO-202ENST00000344204 HOXD3P31249 432 aaPredicted RBP10.75□□□□□ -0.69
TRIO-202ENST00000344204 TOMM6Q96B49 74 aa10.75□□□□□ -0.69
TRIO-202ENST00000344204 IGHV1-18A0A0C4DH31 117 aa10.75□□□□□ -0.69
TRIO-202ENST00000344204 GATA1P15976 413 aaPredicted RBP10.75□□□□□ -0.69
TRIO-202ENST00000344204 SAP25Q8TEE9 199 aa10.75□□□□□ -0.69
TRIO-202ENST00000344204 ZNF71Q9NQZ8 489 aaPredicted RBP10.75□□□□□ -0.69
TRIO-202ENST00000344204 BUB1B-PAK6H3BSN5 160 aa10.75□□□□□ -0.69
TRIO-202ENST00000344204 ZNF503Q96F45 646 aa10.75□□□□□ -0.69
TRIO-202ENST00000344204 C9orf106Q8NAJ2 232 aa10.74□□□□□ -0.69
TRIO-202ENST00000344204 IGHV1-69DA0A0B4J2H0 117 aa10.74□□□□□ -0.69
TRIO-202ENST00000344204 RBAKDNA6NC62 111 aa10.74□□□□□ -0.69
TRIO-202ENST00000344204 Q9H8V8 135 aa10.74□□□□□ -0.69
TRIO-202ENST00000344204 COL4A3Q01955 1670 aa10.74□□□□□ -0.69
TRIO-202ENST00000344204 RPL39LQ96EH5 51 aaKnown RBP10.74□□□□□ -0.69
TRIO-202ENST00000344204 PRB1P04280 392 aa10.73□□□□□ -0.69
TRIO-202ENST00000344204 SLC25A29Q8N8R3 303 aa10.73□□□□□ -0.69
TRIO-202ENST00000344204 TRGV1A0A0A0MS02 117 aa10.73□□□□□ -0.69
TRIO-202ENST00000344204 H0YGX0 51 aa10.73□□□□□ -0.69
TRIO-202ENST00000344204 CDK2AP2O75956 126 aa10.73□□□□□ -0.69
TRIO-202ENST00000344204 ZNF134P52741 427 aa10.73□□□□□ -0.69
TRIO-202ENST00000344204 ZFP2Q6ZN57 461 aa10.73□□□□□ -0.69
TRIO-202ENST00000344204 LYPD6Q86Y78 171 aa10.73□□□□□ -0.69
TRIO-202ENST00000344204 CCL21O00585 134 aa10.73□□□□□ -0.69
TRIO-202ENST00000344204 FANCD2OSQ96PS1 177 aa10.73□□□□□ -0.69
TRIO-202ENST00000344204 SDIM1Q6ZPB5 146 aa10.72□□□□□ -0.69
TRIO-202ENST00000344204 COLCA1Q6ZS62 124 aa10.72□□□□□ -0.69
TRIO-202ENST00000344204 IGHV3OR16-10A0A075B7F0 116 aa10.72□□□□□ -0.69
TRIO-202ENST00000344204 IGLV3-19P01714 112 aa10.72□□□□□ -0.69
TRIO-202ENST00000344204 CFAP126Q5VTH2 177 aa10.72□□□□□ -0.69
TRIO-202ENST00000344204 SS18Q15532 418 aa10.72□□□□□ -0.69
TRIO-202ENST00000344204 PINLYPA6NC86 204 aa10.72□□□□□ -0.69
TRIO-202ENST00000344204 SPRR3Q9UBC9 169 aa10.72□□□□□ -0.69
TRIO-202ENST00000344204 SERP2Q8N6R1 65 aa10.72□□□□□ -0.69
TRIO-202ENST00000344204 TMEM178BH3BS89 294 aa10.71□□□□□ -0.69
TRIO-202ENST00000344204 PFN2P35080 140 aa10.71□□□□□ -0.69
TRIO-202ENST00000344204 Q6Q795 121 aa10.71□□□□□ -0.69
TRIO-202ENST00000344204 ANKRD17O75179 2603 aaKnown RBP10.71□□□□□ -0.69
TRIO-202ENST00000344204 FAM223BA6NKX1 122 aa10.71□□□□□ -0.69
TRIO-202ENST00000344204 P0DMU3 169 aa10.71□□□□□ -0.69
TRIO-202ENST00000344204 FAM231AP0DMU4 169 aa10.71□□□□□ -0.69
TRIO-202ENST00000344204 FAM231CP0DMU5 169 aa10.71□□□□□ -0.69
TRIO-202ENST00000344204 RSPO1Q2MKA7 263 aaPredicted RBP10.71□□□□□ -0.69
TRIO-202ENST00000344204 FAM223AQ8IWN6 122 aa10.71□□□□□ -0.69
TRIO-202ENST00000344204 TRAV23DV6A0A075B6W5 121 aa10.71□□□□□ -0.7
TRIO-202ENST00000344204 HRCT1Q6UXD1 115 aa10.71□□□□□ -0.7
TRIO-202ENST00000344204 OOSP1A8MZH6 123 aa10.71□□□□□ -0.7
TRIO-202ENST00000344204 STHQ8IWL8 128 aa10.7□□□□□ -0.7
TRIO-202ENST00000344204 USMG5Q96IX5 58 aa10.7□□□□□ -0.7
TRIO-202ENST00000344204 UPK3BQ9BT76 320 aa10.7□□□□□ -0.7
TRIO-202ENST00000344204 WISP1O95388 367 aa10.7□□□□□ -0.7
TRIO-202ENST00000344204 B3GALT5-AS1P59052 145 aa10.7□□□□□ -0.7
TRIO-202ENST00000344204 C19orf71A6NCJ1 209 aa10.7□□□□□ -0.7
TRIO-202ENST00000344204 CFHR1Q03591 330 aa10.7□□□□□ -0.7
TRIO-202ENST00000344204 C1orf210Q8IVY1 113 aa10.7□□□□□ -0.7
TRIO-202ENST00000344204 TMEM61Q8N0U2 210 aa10.7□□□□□ -0.7
TRIO-202ENST00000344204 H3BQ85 93 aa10.7□□□□□ -0.7
TRIO-202ENST00000344204 DAD1P61803 113 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
TRIO-202ENST00000344204 VMO1Q7Z5L0 202 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 CRYGCP07315 174 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 ZFHX2Q9C0A1 2572 aaPredicted RBP10.69□□□□□ -0.7
TRIO-202ENST00000344204 C17orf58Q2M2W7 97 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 MPLKIPQ8TAP9 179 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 NRGNQ92686 78 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 PRSS22Q9GZN4 317 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 TEX36Q5VZQ5 186 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 COX7CP15954 63 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 WFDC9Q8NEX5 89 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 ANKRD11Q6UB99 2663 aaPredicted RBP10.69□□□□□ -0.7
TRIO-202ENST00000344204 FAM19A5Q7Z5A7 132 aaPredicted RBP10.69□□□□□ -0.7
TRIO-202ENST00000344204 TRBV6-1A0A0K0K1D8 114 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 C11orf86A6NJI1 115 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 SHISA2Q6UWI4 295 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 DYNAPQ8N1N2 210 aa10.69□□□□□ -0.7
TRIO-202ENST00000344204 LTBRP36941 435 aa10.68□□□□□ -0.7
TRIO-202ENST00000344204 ZNRD1Q9P1U0 126 aa10.68□□□□□ -0.7
TRIO-202ENST00000344204 FUSP35637 526 aaKnown RBP eCLIP10.68□□□□□ -0.7
TRIO-202ENST00000344204 C10orf105Q8TEF2 133 aa10.68□□□□□ -0.7
TRIO-202ENST00000344204 WDR86Q86TI4 376 aa10.68□□□□□ -0.7
TRIO-202ENST00000344204 CRIPAKQ8N1N5 446 aa10.68□□□□□ -0.7
TRIO-202ENST00000344204 WFDC11Q8NEX6 87 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms