RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 GTSCR1Q86UQ5 136 aa10.97□□□□□ -0.65
TDP2-201ENST00000341060 C14orf178Q8N769 122 aaPredicted RBP10.97□□□□□ -0.65
TDP2-201ENST00000341060 TMEM160Q9NX00 188 aa10.97□□□□□ -0.65
TDP2-201ENST00000341060 POLQO75417 2590 aa10.96□□□□□ -0.65
TDP2-201ENST00000341060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.96□□□□□ -0.65
TDP2-201ENST00000341060 K7EMT4 169 aa10.96□□□□□ -0.65
TDP2-201ENST00000341060 SLC25A16P16260 332 aa10.96□□□□□ -0.65
TDP2-201ENST00000341060 AP1S3Q96PC3 154 aa10.96□□□□□ -0.65
TDP2-201ENST00000341060 TTTY13Q9BZ97 58 aa10.96□□□□□ -0.65
TDP2-201ENST00000341060 SPRY2O43597 315 aa10.96□□□□□ -0.66
TDP2-201ENST00000341060 PLNP26678 52 aa10.96□□□□□ -0.66
TDP2-201ENST00000341060 ABCA12Q86UK0 2595 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 CSPG4Q6UVK1 2322 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 TRBV25-1A0A075B6N4 114 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 TRAV12-1A0A0B4J245 112 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 KLLNB2CW77 178 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 GNRH2O43555 120 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 PLA2G2AP14555 144 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 GATA3P23771 443 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 TOMM6Q96B49 74 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 JMJD8Q96S16 334 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 CHAC1Q9BUX1 264 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 CST9LQ9H4G1 147 aa10.95□□□□□ -0.66
TDP2-201ENST00000341060 GAGE12BA1L429 117 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 GAGE10A6NGK3 116 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 H3BUT2 72 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 NXPH4O95158 308 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 SAMD13Q5VXD3 122 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 UFSP1Q6NVU6 142 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 DCANP1Q8TF63 244 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 NRGNQ92686 78 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 RPL39LQ96EH5 51 aaKnown RBP10.94□□□□□ -0.66
TDP2-201ENST00000341060 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 COX6B1P14854 86 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 PSMB8P28062 276 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 GCN1Q92616 2671 aaKnown RBP10.94□□□□□ -0.66
TDP2-201ENST00000341060 PTPN13Q12923 2485 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 DOPEY2Q9Y3R5 2298 aa10.94□□□□□ -0.66
TDP2-201ENST00000341060 F8VRH5 84 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 MGPP08493 103 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 EDN2P20800 178 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 CDKN1BP46527 198 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 TMEM95Q3KNT9 176 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 GTF2H5Q6ZYL4 71 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 POM121L12Q8N7R1 296 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 H7C1H1 209 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 PPP1R17O96001 155 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 SRD5A1P18405 259 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 ID1P41134 155 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 SELENOKQ9Y6D0 94 aa10.93□□□□□ -0.66
TDP2-201ENST00000341060 AGRNO00468 2067 aa10.92□□□□□ -0.66
TDP2-201ENST00000341060 J3QKU1 62 aa10.92□□□□□ -0.66
TDP2-201ENST00000341060 GCSHP23434 173 aa10.92□□□□□ -0.66
TDP2-201ENST00000341060 FXYD2P54710 66 aa10.92□□□□□ -0.66
TDP2-201ENST00000341060 DSCR9P59020 149 aa10.92□□□□□ -0.66
TDP2-201ENST00000341060 SCGB3A1Q96QR1 104 aa10.92□□□□□ -0.66
TDP2-201ENST00000341060 K7EP34 96 aa10.91□□□□□ -0.66
TDP2-201ENST00000341060 NEXN-AS1Q8NBZ9 246 aa10.91□□□□□ -0.66
TDP2-201ENST00000341060 RAB37Q96AX2 223 aa10.91□□□□□ -0.66
TDP2-201ENST00000341060 OCIAD2Q56VL3 154 aa10.91□□□□□ -0.66
TDP2-201ENST00000341060 FAM159AQ6UWV7 190 aa10.91□□□□□ -0.66
TDP2-201ENST00000341060 KIF25-AS1Q9Y6Z4 181 aa10.91□□□□□ -0.66
TDP2-201ENST00000341060 A0A1W2PPM0 123 aa10.9□□□□□ -0.66
TDP2-201ENST00000341060 IGHV4-59P01825 116 aa10.9□□□□□ -0.66
TDP2-201ENST00000341060 C2orf66Q6UXQ4 117 aa10.9□□□□□ -0.66
TDP2-201ENST00000341060 NAA38Q9BRA0 125 aaKnown RBP10.9□□□□□ -0.66
TDP2-201ENST00000341060 TM2D2Q9BX73 214 aa10.9□□□□□ -0.66
TDP2-201ENST00000341060 SMIM13P0DJ93 91 aa10.9□□□□□ -0.67
TDP2-201ENST00000341060 LINC00315P59091 139 aa10.9□□□□□ -0.67
TDP2-201ENST00000341060 DEFB112Q30KQ8 113 aa10.9□□□□□ -0.67
TDP2-201ENST00000341060 CEND1Q8N111 149 aa10.9□□□□□ -0.67
TDP2-201ENST00000341060 MAPKAPK5-AS1Q8N8E1 139 aa10.9□□□□□ -0.67
TDP2-201ENST00000341060 CHTOPQ9Y3Y2 248 aaKnown RBP10.9□□□□□ -0.67
TDP2-201ENST00000341060 ANKRD17O75179 2603 aaKnown RBP10.89□□□□□ -0.67
TDP2-201ENST00000341060 IGHV4OR15-8A0A075B7B6 117 aa10.89□□□□□ -0.67
TDP2-201ENST00000341060 A0A087WW49 117 aa10.89□□□□□ -0.67
TDP2-201ENST00000341060 APCP25054 2843 aa10.89□□□□□ -0.67
TDP2-201ENST00000341060 TMEM89A2RUT3 159 aa10.88□□□□□ -0.67
TDP2-201ENST00000341060 RPL32P62910 135 aaKnown RBP10.88□□□□□ -0.67
TDP2-201ENST00000341060 BAALCQ8WXS3 180 aa10.88□□□□□ -0.67
TDP2-201ENST00000341060 ODF3Q96PU9 254 aa10.88□□□□□ -0.67
TDP2-201ENST00000341060 CSTL1Q9H114 145 aa10.88□□□□□ -0.67
TDP2-201ENST00000341060 TAL2Q16559 108 aa10.88□□□□□ -0.67
TDP2-201ENST00000341060 C10orf99Q6UWK7 81 aa10.88□□□□□ -0.67
TDP2-201ENST00000341060 LINC01356Q8N9X3 169 aa10.88□□□□□ -0.67
TDP2-201ENST00000341060 PHLDA1Q8WV24 401 aaPredicted RBP10.87□□□□□ -0.67
TDP2-201ENST00000341060 TRAV12-3A0A0B4J271 114 aa10.87□□□□□ -0.67
TDP2-201ENST00000341060 CD7P09564 240 aa10.87□□□□□ -0.67
TDP2-201ENST00000341060 HIST2H2BCQ6DN03 193 aa10.87□□□□□ -0.67
TDP2-201ENST00000341060 OR5A1Q8NGJ0 315 aa10.87□□□□□ -0.67
TDP2-201ENST00000341060 A0A096LNT2 108 aa10.86□□□□□ -0.67
TDP2-201ENST00000341060 ZNF688P0C7X2 276 aa10.86□□□□□ -0.67
TDP2-201ENST00000341060 FABP2P12104 132 aa10.86□□□□□ -0.67
TDP2-201ENST00000341060 KRTAP10-9P60411 292 aa10.86□□□□□ -0.67
TDP2-201ENST00000341060 SAMD5Q5TGI4 173 aa10.86□□□□□ -0.67
TDP2-201ENST00000341060 SPCS1Q9Y6A9 102 aa10.86□□□□□ -0.67
TDP2-201ENST00000341060 OR11H12B2RN74 326 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 J3QLI3 93 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 PCP4P48539 62 aa10.85□□□□□ -0.67
TDP2-201ENST00000341060 SNRPD3P62318 126 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms