RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 TRGV3P03979 118 aa7.84□□□□□ -1.15
HIF1A-202ENST00000337138 SRD5A1P18405 259 aa7.84□□□□□ -1.15
HIF1A-202ENST00000337138 FANCD2OSQ96PS1 177 aa7.84□□□□□ -1.15
HIF1A-202ENST00000337138 VMO1Q7Z5L0 202 aa7.84□□□□□ -1.15
HIF1A-202ENST00000337138 LINC01546A6NGU7 62 aa7.84□□□□□ -1.16
HIF1A-202ENST00000337138 RPL13AP40429 203 aaKnown RBP7.84□□□□□ -1.16
HIF1A-202ENST00000337138 ZNF562Q6V9R5 426 aa7.84□□□□□ -1.16
HIF1A-202ENST00000337138 MGAM2Q2M2H8 2515 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 IGHV3-11P01762 117 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 IGHG4P01861 327 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 HLA-DRB4P13762 266 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 ATP5J2P56134 94 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 UFSP1Q6NVU6 142 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 SMIM20Q8N5G0 67 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 HLA-DRB4X5D2U9 266 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 PRSS29PA6NIE9 313 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 NEGR1Q7Z3B1 354 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 C16orf92Q96LL3 132 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 LINC01548A6NM66 108 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 C3orf56Q8N813 242 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 CFHR4Q92496 578 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 PHLDA3Q9Y5J5 127 aa7.83□□□□□ -1.16
HIF1A-202ENST00000337138 C9JAW5 83 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 K7ENP7 123 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 FGF6P10767 208 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 C8orf86Q6ZUL3 223 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 USP24Q9UPU5 2620 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 SIVA1O15304 175 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 MT-ATP8P03928 68 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 CTSGP08311 255 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 CDSNQ15517 529 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 FAM74A4Q5TZK3 123 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 HIST2H2BCQ6DN03 193 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 DTX2Q86UW9 622 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 RNF183Q96D59 192 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 U3KQK5 164 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 LAGE3Q14657 143 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 LY6EQ16553 131 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.82□□□□□ -1.16
HIF1A-202ENST00000337138 SPANXB1Q9NS25 103 aaPredicted RBP7.82□□□□□ -1.16
HIF1A-202ENST00000337138 IGKV3-20P01619 116 aa7.81□□□□□ -1.16
HIF1A-202ENST00000337138 RRN3P1Q2M238 152 aa7.81□□□□□ -1.16
HIF1A-202ENST00000337138 TRAV2A0A0B4J234 112 aa7.81□□□□□ -1.16
HIF1A-202ENST00000337138 HTN1P15515 57 aa7.81□□□□□ -1.16
HIF1A-202ENST00000337138 LGALS3P17931 250 aaKnown RBP7.81□□□□□ -1.16
HIF1A-202ENST00000337138 LYPD1Q8N2G4 141 aa7.81□□□□□ -1.16
HIF1A-202ENST00000337138 AJUBAQ96IF1 538 aa7.81□□□□□ -1.16
HIF1A-202ENST00000337138 ATP6V0E1O15342 81 aa7.81□□□□□ -1.16
HIF1A-202ENST00000337138 SCGB1A1P11684 91 aa7.81□□□□□ -1.16
HIF1A-202ENST00000337138 SLC25A16P16260 332 aa7.81□□□□□ -1.16
HIF1A-202ENST00000337138 LY6G5BQ8NDX9 201 aa7.81□□□□□ -1.16
HIF1A-202ENST00000337138 IGF1P05019 195 aa7.8□□□□□ -1.16
HIF1A-202ENST00000337138 SRSF1Q07955 248 aaKnown RBP eCLIP7.8□□□□□ -1.16
HIF1A-202ENST00000337138 SMAD5-AS1Q9Y6J3 95 aa7.8□□□□□ -1.16
HIF1A-202ENST00000337138 CFAP46Q8IYW2 2715 aa7.8□□□□□ -1.16
HIF1A-202ENST00000337138 IGLV11-55A0A075B6I3 123 aa7.8□□□□□ -1.16
HIF1A-202ENST00000337138 BAHCC1Q9P281 2608 aa7.8□□□□□ -1.16
HIF1A-202ENST00000337138 WI2-2373I1.2A0A1W2PRP0 233 aa7.8□□□□□ -1.16
HIF1A-202ENST00000337138 C14orf178Q8N769 122 aaPredicted RBP7.8□□□□□ -1.16
HIF1A-202ENST00000337138 AGPAT4-IT1Q9H0P7 198 aa7.8□□□□□ -1.16
HIF1A-202ENST00000337138 SMPXQ9UHP9 88 aa7.8□□□□□ -1.16
HIF1A-202ENST00000337138 ZNF493Q6ZR52 646 aa7.79□□□□□ -1.16
HIF1A-202ENST00000337138 F6UB75 175 aa7.79□□□□□ -1.16
HIF1A-202ENST00000337138 BRD3OSQ6XYD6 125 aa7.79□□□□□ -1.16
HIF1A-202ENST00000337138 ZFP36P26651 326 aaKnown RBP7.79□□□□□ -1.16
HIF1A-202ENST00000337138 NPC2P61916 151 aa7.79□□□□□ -1.16
HIF1A-202ENST00000337138 FOXI1Q12951 378 aa7.79□□□□□ -1.16
HIF1A-202ENST00000337138 PPDPFLQ8WWR9 84 aa7.79□□□□□ -1.16
HIF1A-202ENST00000337138 PSMG4Q5JS54 123 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 METTL26Q96S19 204 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 PRADC1Q9BSG0 188 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 ZNF256Q9Y2P7 627 aaPredicted RBP7.78□□□□□ -1.16
HIF1A-202ENST00000337138 IGHV7-81A0A0B4J1V7 117 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 PDE6HQ13956 83 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 ODF1Q14990 250 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 KLHL30-AS1Q8NEE0 82 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 TMEM262E9PQX1 116 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 H7C1H1 209 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 TSPAN13O95857 204 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 PLNP26678 52 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 RNASE4P34096 147 aaKnown RBP7.78□□□□□ -1.16
HIF1A-202ENST00000337138 TMEM95Q3KNT9 176 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 C11orf21Q9P2W6 132 aa7.78□□□□□ -1.16
HIF1A-202ENST00000337138 TRAV12-3A0A0B4J271 114 aa7.77□□□□□ -1.17
HIF1A-202ENST00000337138 MYMXA0A1B0GTQ4 84 aa7.77□□□□□ -1.17
HIF1A-202ENST00000337138 GAGE5Q13069 117 aa7.77□□□□□ -1.17
HIF1A-202ENST00000337138 GAGE6Q13070 117 aa7.77□□□□□ -1.17
HIF1A-202ENST00000337138 C1QTNF4Q9BXJ3 329 aa7.77□□□□□ -1.17
HIF1A-202ENST00000337138 IGKV3D-20A0A0C4DH25 116 aa7.77□□□□□ -1.17
HIF1A-202ENST00000337138 SAA4P35542 130 aa7.77□□□□□ -1.17
HIF1A-202ENST00000337138 MAPKAPK5-AS1Q8N8E1 139 aa7.77□□□□□ -1.17
HIF1A-202ENST00000337138 RNF185Q96GF1 192 aa7.77□□□□□ -1.17
HIF1A-202ENST00000337138 CHD6Q8TD26 2715 aa7.76□□□□□ -1.17
HIF1A-202ENST00000337138 ZFP2Q6ZN57 461 aa7.76□□□□□ -1.17
HIF1A-202ENST00000337138 RNF5Q99942 180 aa7.76□□□□□ -1.17
HIF1A-202ENST00000337138 ODF3BA8MYP8 253 aa7.76□□□□□ -1.17
HIF1A-202ENST00000337138 Q8N6K4 173 aa7.76□□□□□ -1.17
HIF1A-202ENST00000337138 RPL39LQ96EH5 51 aaKnown RBP7.76□□□□□ -1.17
HIF1A-202ENST00000337138 YAE1D1Q9NRH1 226 aa7.76□□□□□ -1.17
HIF1A-202ENST00000337138 PF4V1P10720 104 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms