RNA–Protein interactions for RNA: ENST00000326324.10

FGFR1-201, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 3,816 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-201ENST00000326324 SIRPDQ9H106 197 aa11.22□□□□□ -0.61
FGFR1-201ENST00000326324 IGHV3-73A0A0B4J1V6 119 aa11.22□□□□□ -0.61
FGFR1-201ENST00000326324 FBXL19-AS1Q494R0 122 aa11.22□□□□□ -0.61
FGFR1-201ENST00000326324 C11orf71Q6IPW1 123 aa11.22□□□□□ -0.61
FGFR1-201ENST00000326324 Q6ZS46 218 aa11.22□□□□□ -0.61
FGFR1-201ENST00000326324 MAPKAPK5-AS1Q8N8E1 139 aa11.22□□□□□ -0.61
FGFR1-201ENST00000326324 PGPEP1Q9NXJ5 209 aa11.22□□□□□ -0.61
FGFR1-201ENST00000326324 IGHV4-30-2A0A087WSY4 118 aa11.21□□□□□ -0.61
FGFR1-201ENST00000326324 IGKV3D-20A0A0C4DH25 116 aa11.21□□□□□ -0.61
FGFR1-201ENST00000326324 ASIPP42127 132 aa11.21□□□□□ -0.61
FGFR1-201ENST00000326324 LMO4P61968 165 aa11.21□□□□□ -0.61
FGFR1-201ENST00000326324 F8W735 103 aaPredicted RBP11.21□□□□□ -0.61
FGFR1-201ENST00000326324 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.61
FGFR1-201ENST00000326324 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.61
FGFR1-201ENST00000326324 CD7P09564 240 aa11.21□□□□□ -0.62
FGFR1-201ENST00000326324 FGF6P10767 208 aa11.21□□□□□ -0.62
FGFR1-201ENST00000326324 ZNF56Q15929 161 aa11.21□□□□□ -0.62
FGFR1-201ENST00000326324 C11orf21Q9P2W6 132 aa11.21□□□□□ -0.62
FGFR1-201ENST00000326324 HLA-DRB4P13762 266 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 GAGE13Q4V321 117 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 DPF1Q92782 380 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 CCDC140Q96MF4 163 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 HLA-DRB4X5D2U9 266 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 ITPR1Q14643 2758 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 TRAV12-3A0A0B4J271 114 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 BUB3O43684 328 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 SLC25A16P16260 332 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 NPFFR1Q9GZQ6 430 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 FAM159AQ6UWV7 190 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 MOB4Q9Y3A3 225 aa11.2□□□□□ -0.62
FGFR1-201ENST00000326324 TMEM238C9JI98 176 aa11.19□□□□□ -0.62
FGFR1-201ENST00000326324 HOXA3O43365 443 aaPredicted RBP11.19□□□□□ -0.62
FGFR1-201ENST00000326324 ZNF688P0C7X2 276 aa11.19□□□□□ -0.62
FGFR1-201ENST00000326324 NPC2P61916 151 aa11.19□□□□□ -0.62
FGFR1-201ENST00000326324 SLC50A1Q9BRV3 221 aa11.19□□□□□ -0.62
FGFR1-201ENST00000326324 Q8N8P6 123 aa11.19□□□□□ -0.62
FGFR1-201ENST00000326324 AZU1P20160 251 aa11.19□□□□□ -0.62
FGFR1-201ENST00000326324 ANXA2RQ3ZCQ2 193 aa11.19□□□□□ -0.62
FGFR1-201ENST00000326324 CEND1Q8N111 149 aa11.19□□□□□ -0.62
FGFR1-201ENST00000326324 RAX2Q96IS3 184 aa11.19□□□□□ -0.62
FGFR1-201ENST00000326324 SIGMAR1Q99720 223 aa11.19□□□□□ -0.62
FGFR1-201ENST00000326324 SRSF8Q9BRL6 282 aaKnown RBP11.19□□□□□ -0.62
FGFR1-201ENST00000326324 JPT2Q9H910 190 aa11.19□□□□□ -0.62
FGFR1-201ENST00000326324 TRAV12-2A0A075B6T6 113 aa11.18□□□□□ -0.62
FGFR1-201ENST00000326324 LINC01549A6NIU2 74 aa11.18□□□□□ -0.62
FGFR1-201ENST00000326324 C2orf66Q6UXQ4 117 aa11.18□□□□□ -0.62
FGFR1-201ENST00000326324 ZNF493Q6ZR52 646 aa11.18□□□□□ -0.62
FGFR1-201ENST00000326324 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
FGFR1-201ENST00000326324 C10orf99Q6UWK7 81 aa11.18□□□□□ -0.62
FGFR1-201ENST00000326324 IGHV1-69DA0A0B4J2H0 117 aa11.17□□□□□ -0.62
FGFR1-201ENST00000326324 IGHV1-69P01742 117 aa11.17□□□□□ -0.62
FGFR1-201ENST00000326324 C12orf74Q32Q52 190 aa11.17□□□□□ -0.62
FGFR1-201ENST00000326324 CIDEAO60543 219 aa11.17□□□□□ -0.62
FGFR1-201ENST00000326324 EDN2P20800 178 aa11.17□□□□□ -0.62
FGFR1-201ENST00000326324 RHPN1-AS1Q9BWJ2 59 aa11.17□□□□□ -0.62
FGFR1-201ENST00000326324 OOSP1A8MZH6 123 aa11.16□□□□□ -0.62
FGFR1-201ENST00000326324 SUMO2P61956 95 aaKnown RBP11.16□□□□□ -0.62
FGFR1-201ENST00000326324 PRADC1Q9BSG0 188 aa11.16□□□□□ -0.62
FGFR1-201ENST00000326324 IGSF10Q6WRI0 2623 aa11.16□□□□□ -0.62
FGFR1-201ENST00000326324 H7C1H1 209 aa11.16□□□□□ -0.62
FGFR1-201ENST00000326324 A0A0U1RRA0 63 aa11.16□□□□□ -0.62
FGFR1-201ENST00000326324 MRPS12O15235 138 aaKnown RBP11.15□□□□□ -0.62
FGFR1-201ENST00000326324 RAB9AP51151 201 aa11.15□□□□□ -0.62
FGFR1-201ENST00000326324 C5orf56Q8N8D9 126 aa11.15□□□□□ -0.62
FGFR1-201ENST00000326324 PTH2Q96A98 100 aa11.15□□□□□ -0.62
FGFR1-201ENST00000326324 DUX3Q96PT4 197 aa11.15□□□□□ -0.62
FGFR1-201ENST00000326324 KIR2DL4Q99706 377 aa11.15□□□□□ -0.62
FGFR1-201ENST00000326324 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.63
FGFR1-201ENST00000326324 TRAV21A0A0B4J279 112 aa11.15□□□□□ -0.63
FGFR1-201ENST00000326324 IGLC6P0CF74 106 aa11.15□□□□□ -0.63
FGFR1-201ENST00000326324 IGLL5B9A064 214 aa11.14□□□□□ -0.63
FGFR1-201ENST00000326324 HERVK_113P61574 105 aa11.14□□□□□ -0.63
FGFR1-201ENST00000326324 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
FGFR1-201ENST00000326324 G3V4G9 280 aa11.14□□□□□ -0.63
FGFR1-201ENST00000326324 RPL39P62891 51 aaKnown RBP11.14□□□□□ -0.63
FGFR1-201ENST00000326324 SMIM2Q9BVW6 85 aa11.14□□□□□ -0.63
FGFR1-201ENST00000326324 PRSS29PA6NIE9 313 aa11.14□□□□□ -0.63
FGFR1-201ENST00000326324 IGHV4-59P01825 116 aa11.14□□□□□ -0.63
FGFR1-201ENST00000326324 PSMG4Q5JS54 123 aa11.14□□□□□ -0.63
FGFR1-201ENST00000326324 TP53TG1Q9Y2A0 90 aa11.14□□□□□ -0.63
FGFR1-201ENST00000326324 IGHV3OR16-12A0A075B7B8 117 aa11.13□□□□□ -0.63
FGFR1-201ENST00000326324 RNASE13Q5GAN3 156 aaKnown RBP11.13□□□□□ -0.63
FGFR1-201ENST00000326324 KLK9Q9UKQ9 250 aa11.13□□□□□ -0.63
FGFR1-201ENST00000326324 TRBV7-1A0A0A6YYK4 115 aa11.13□□□□□ -0.63
FGFR1-201ENST00000326324 DUSP14O95147 198 aaKnown RBP11.13□□□□□ -0.63
FGFR1-201ENST00000326324 LGALS3P17931 250 aaKnown RBP11.13□□□□□ -0.63
FGFR1-201ENST00000326324 INSL3P51460 131 aa11.13□□□□□ -0.63
FGFR1-201ENST00000326324 ORMDL2Q53FV1 153 aa11.13□□□□□ -0.63
FGFR1-201ENST00000326324 C1orf122Q6ZSJ8 110 aa11.13□□□□□ -0.63
FGFR1-201ENST00000326324 A0A087WX48 190 aa11.12□□□□□ -0.63
FGFR1-201ENST00000326324 RNF223E7ERA6 249 aa11.12□□□□□ -0.63
FGFR1-201ENST00000326324 F8VRH5 84 aa11.12□□□□□ -0.63
FGFR1-201ENST00000326324 PRR9Q5T870 116 aa11.12□□□□□ -0.63
FGFR1-201ENST00000326324 DPH3P1Q9H4G8 78 aa11.12□□□□□ -0.63
FGFR1-201ENST00000326324 KNCNA6PVL3 124 aa11.12□□□□□ -0.63
FGFR1-201ENST00000326324 PLNP26678 52 aa11.12□□□□□ -0.63
FGFR1-201ENST00000326324 OPRPNQ99935 248 aaPredicted RBP11.12□□□□□ -0.63
FGFR1-201ENST00000326324 SMPXQ9UHP9 88 aa11.12□□□□□ -0.63
FGFR1-201ENST00000326324 MYMXA0A1B0GTQ4 84 aa11.11□□□□□ -0.63
FGFR1-201ENST00000326324 GAGE12HA6NDE8 117 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms