RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 K7EIM0 57 aa12.89□□□□□ -0.35
PACS1-201ENST00000320580 Q6ZS92 163 aa12.89□□□□□ -0.35
PACS1-201ENST00000320580 NDUFA12Q9UI09 145 aa12.89□□□□□ -0.35
PACS1-201ENST00000320580 LINC00527Q9UJ94 153 aa12.89□□□□□ -0.35
PACS1-201ENST00000320580 PRAC2D3DTV9 90 aa12.88□□□□□ -0.35
PACS1-201ENST00000320580 LINC00311Q8N616 119 aa12.88□□□□□ -0.35
PACS1-201ENST00000320580 CGB3P0DN86 165 aa12.88□□□□□ -0.35
PACS1-201ENST00000320580 CGB7P0DN87 165 aa12.88□□□□□ -0.35
PACS1-201ENST00000320580 RNF5Q99942 180 aa12.88□□□□□ -0.35
PACS1-201ENST00000320580 SPRY4Q9C004 299 aa12.88□□□□□ -0.35
PACS1-201ENST00000320580 IGLC6P0CF74 106 aa12.88□□□□□ -0.35
PACS1-201ENST00000320580 CLEC2BQ92478 149 aa12.88□□□□□ -0.35
PACS1-201ENST00000320580 TOMM6Q96B49 74 aa12.88□□□□□ -0.35
PACS1-201ENST00000320580 RNF185Q96GF1 192 aa12.88□□□□□ -0.35
PACS1-201ENST00000320580 IGLV2-23P01705 113 aa12.88□□□□□ -0.35
PACS1-201ENST00000320580 VPS13AQ96RL7 3174 aa12.87□□□□□ -0.35
PACS1-201ENST00000320580 TRAV41A0A0B4J266 112 aa12.87□□□□□ -0.35
PACS1-201ENST00000320580 SPANXDQ9BXN6 97 aa12.87□□□□□ -0.35
PACS1-201ENST00000320580 ICOSQ9Y6W8 199 aa12.87□□□□□ -0.35
PACS1-201ENST00000320580 OVOL1O14753 267 aa12.87□□□□□ -0.35
PACS1-201ENST00000320580 LHBP01229 141 aa12.87□□□□□ -0.35
PACS1-201ENST00000320580 IGLV1-44P01699 117 aa12.87□□□□□ -0.35
PACS1-201ENST00000320580 RPL39P62891 51 aaKnown RBP12.87□□□□□ -0.35
PACS1-201ENST00000320580 LINC00477Q96M19 166 aa12.87□□□□□ -0.35
PACS1-201ENST00000320580 IGKV3OR2-268A0A0C4DH90 116 aa12.86□□□□□ -0.35
PACS1-201ENST00000320580 RBAKDNA6NC62 111 aa12.86□□□□□ -0.35
PACS1-201ENST00000320580 INAFM2P0DMQ5 153 aa12.86□□□□□ -0.35
PACS1-201ENST00000320580 LOXP28300 417 aaPredicted RBP12.86□□□□□ -0.35
PACS1-201ENST00000320580 A0A0J9YY99 117 aa12.86□□□□□ -0.35
PACS1-201ENST00000320580 MRPS12O15235 138 aaKnown RBP12.86□□□□□ -0.35
PACS1-201ENST00000320580 TOMM7Q9P0U1 55 aa12.86□□□□□ -0.35
PACS1-201ENST00000320580 IGHV3-11P01762 117 aa12.86□□□□□ -0.35
PACS1-201ENST00000320580 HERVK_113P63121 156 aa12.86□□□□□ -0.35
PACS1-201ENST00000320580 RNASE6Q93091 150 aaKnown RBP12.86□□□□□ -0.35
PACS1-201ENST00000320580 CACNA1AO00555 2505 aa12.86□□□□□ -0.35
PACS1-201ENST00000320580 ATP5J2P56134 94 aa12.85□□□□□ -0.35
PACS1-201ENST00000320580 C10orf142B7Z368 130 aa12.85□□□□□ -0.35
PACS1-201ENST00000320580 C9orf139Q6ZV77 190 aa12.85□□□□□ -0.35
PACS1-201ENST00000320580 GATD1Q8NB37 220 aa12.85□□□□□ -0.35
PACS1-201ENST00000320580 LY6G5BQ8NDX9 201 aa12.85□□□□□ -0.35
PACS1-201ENST00000320580 KHDC1LQ5JSQ8 128 aa12.85□□□□□ -0.35
PACS1-201ENST00000320580 IGHV3-73A0A0B4J1V6 119 aa12.85□□□□□ -0.35
PACS1-201ENST00000320580 C1orf43Q9BWL3 253 aa12.85□□□□□ -0.35
PACS1-201ENST00000320580 DNAH14Q0VDD8 3507 aa12.84□□□□□ -0.35
PACS1-201ENST00000320580 H3BT86 120 aa12.84□□□□□ -0.35
PACS1-201ENST00000320580 ACYP1P07311 99 aa12.84□□□□□ -0.35
PACS1-201ENST00000320580 CHD8Q9HCK8 2581 aa12.84□□□□□ -0.35
PACS1-201ENST00000320580 CRLF1O75462 422 aa12.84□□□□□ -0.35
PACS1-201ENST00000320580 CENPVL3A0A0U1RRI6 287 aa12.83□□□□□ -0.35
PACS1-201ENST00000320580 LINC00694P0DN24 101 aa12.83□□□□□ -0.35
PACS1-201ENST00000320580 PPDPFQ9H3Y8 114 aa12.83□□□□□ -0.35
PACS1-201ENST00000320580 PRO0461Q9UI25 63 aa12.83□□□□□ -0.35
PACS1-201ENST00000320580 LAMA1P25391 3075 aa12.83□□□□□ -0.36
PACS1-201ENST00000320580 A0A1B0GX51 115 aa12.83□□□□□ -0.36
PACS1-201ENST00000320580 LEPROTO15243 131 aa12.83□□□□□ -0.36
PACS1-201ENST00000320580 MSMPQ1L6U9 139 aa12.83□□□□□ -0.36
PACS1-201ENST00000320580 NEXN-AS1Q8NBZ9 246 aa12.83□□□□□ -0.36
PACS1-201ENST00000320580 A0A0J9YXV3 536 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 UQCRQO14949 82 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 PAX8Q06710 450 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 IGFBPL1Q8WX77 278 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 AJUBAQ96IF1 538 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 ATRXP46100 2492 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 NCKAP5O14513 1909 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 ARHGAP32A7KAX9 2087 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 IGHV1-69DA0A0B4J2H0 117 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 A0A1W2PNU3 283 aaPredicted RBP12.82□□□□□ -0.36
PACS1-201ENST00000320580 SMCPP49901 116 aaPredicted RBP12.82□□□□□ -0.36
PACS1-201ENST00000320580 SYNJ2BPP57105 145 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 RUSC1-AS1Q66K80 236 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 SLC25A29Q8N8R3 303 aa12.82□□□□□ -0.36
PACS1-201ENST00000320580 TET2Q6N021 2002 aaPredicted RBP12.82□□□□□ -0.36
PACS1-201ENST00000320580 TEX22C9J3V5 150 aa12.81□□□□□ -0.36
PACS1-201ENST00000320580 LGALS9O00182 355 aa12.81□□□□□ -0.36
PACS1-201ENST00000320580 GNRH2O43555 120 aa12.81□□□□□ -0.36
PACS1-201ENST00000320580 IGHV3-33P01772 117 aa12.81□□□□□ -0.36
PACS1-201ENST00000320580 RNASE13Q5GAN3 156 aaKnown RBP12.81□□□□□ -0.36
PACS1-201ENST00000320580 ZMAT4Q9H898 229 aa12.81□□□□□ -0.36
PACS1-201ENST00000320580 SPTBN5Q9NRC6 3674 aaKnown RBP12.81□□□□□ -0.36
PACS1-201ENST00000320580 TNRC18O15417 2968 aaPredicted RBP12.81□□□□□ -0.36
PACS1-201ENST00000320580 TLN1Q9Y490 2541 aaKnown RBP12.81□□□□□ -0.36
PACS1-201ENST00000320580 IGLV3-9A0A075B6K5 115 aa12.81□□□□□ -0.36
PACS1-201ENST00000320580 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
PACS1-201ENST00000320580 C2CD3Q4AC94 2353 aa12.81□□□□□ -0.36
PACS1-201ENST00000320580 BAALC-AS2P0C853 105 aa12.81□□□□□ -0.36
PACS1-201ENST00000320580 CRIP2P52943 208 aaPredicted RBP12.81□□□□□ -0.36
PACS1-201ENST00000320580 PTPRQQ9UMZ3 2332 aa12.8□□□□□ -0.36
PACS1-201ENST00000320580 B9A039 149 aa12.8□□□□□ -0.36
PACS1-201ENST00000320580 C3orf22Q8N5N4 141 aa12.8□□□□□ -0.36
PACS1-201ENST00000320580 VPREB3Q9UKI3 123 aa12.8□□□□□ -0.36
PACS1-201ENST00000320580 ATOX1O00244 68 aa12.8□□□□□ -0.36
PACS1-201ENST00000320580 NDUFA7O95182 113 aa12.8□□□□□ -0.36
PACS1-201ENST00000320580 IGKV3D-7A0A0C4DH55 119 aa12.8□□□□□ -0.36
PACS1-201ENST00000320580 M0R1W7 72 aa12.8□□□□□ -0.36
PACS1-201ENST00000320580 UBE2E1P51965 193 aa12.8□□□□□ -0.36
PACS1-201ENST00000320580 SPANXCQ9NY87 97 aa12.79□□□□□ -0.36
PACS1-201ENST00000320580 PEMTQ9UBM1 199 aa12.79□□□□□ -0.36
PACS1-201ENST00000320580 ANKRD11Q6UB99 2663 aaPredicted RBP12.79□□□□□ -0.36
PACS1-201ENST00000320580 OOSP1A8MZH6 123 aa12.79□□□□□ -0.36
PACS1-201ENST00000320580 Q6ZS46 218 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms