RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 A0A1B0GUT8 65 aa19.83■□□□□ 0.77
CTDNEP1-201ENST00000318988 SSTP61278 116 aa19.83■□□□□ 0.77
CTDNEP1-201ENST00000318988 SPANXN1Q5VSR9 72 aa19.83■□□□□ 0.77
CTDNEP1-201ENST00000318988 MUC21A0A0G2JKD1 596 aa19.82■□□□□ 0.76
CTDNEP1-201ENST00000318988 MUC21A0A140T8X8 626 aa19.82■□□□□ 0.76
CTDNEP1-201ENST00000318988 SNURFLB1AK76 121 aa19.82■□□□□ 0.76
CTDNEP1-201ENST00000318988 CACNG7P62955 275 aa19.82■□□□□ 0.76
CTDNEP1-201ENST00000318988 RIGQ13278 110 aa19.82■□□□□ 0.76
CTDNEP1-201ENST00000318988 RNASE8Q8TDE3 154 aaKnown RBP19.82■□□□□ 0.76
CTDNEP1-201ENST00000318988 C9orf85Q96MD7 179 aa19.82■□□□□ 0.76
CTDNEP1-201ENST00000318988 MRPL54Q6P161 138 aaKnown RBP19.81■□□□□ 0.76
CTDNEP1-201ENST00000318988 X6R8D5 127 aa19.81■□□□□ 0.76
CTDNEP1-201ENST00000318988 SPXQ9BT56 116 aa19.81■□□□□ 0.76
CTDNEP1-201ENST00000318988 SCRT2Q9NQ03 307 aa19.81■□□□□ 0.76
CTDNEP1-201ENST00000318988 TGIF2-C20orf24A0A0A6YYL0 155 aa19.8■□□□□ 0.76
CTDNEP1-201ENST00000318988 WDR73Q6P4I2 378 aa19.8■□□□□ 0.76
CTDNEP1-201ENST00000318988 ATP5L2Q7Z4Y8 100 aa19.8■□□□□ 0.76
CTDNEP1-201ENST00000318988 C11orf72Q8NBR9 251 aa19.8■□□□□ 0.76
CTDNEP1-201ENST00000318988 SYT8Q8NBV8 401 aa19.8■□□□□ 0.76
CTDNEP1-201ENST00000318988 OR10AG1Q8NH19 301 aa19.8■□□□□ 0.76
CTDNEP1-201ENST00000318988 TWIST1Q15672 202 aa19.79■□□□□ 0.76
CTDNEP1-201ENST00000318988 SBSPONQ8IVN8 264 aa19.79■□□□□ 0.76
CTDNEP1-201ENST00000318988 ZFP82Q8N141 532 aa19.79■□□□□ 0.76
CTDNEP1-201ENST00000318988 TRBV24-1A0A075B6N3 115 aa19.78■□□□□ 0.76
CTDNEP1-201ENST00000318988 M0R381 172 aa19.78■□□□□ 0.76
CTDNEP1-201ENST00000318988 MIFP14174 115 aa19.78■□□□□ 0.76
CTDNEP1-201ENST00000318988 OVOL2Q9BRP0 275 aa19.78■□□□□ 0.76
CTDNEP1-201ENST00000318988 NTF3P20783 257 aa19.77■□□□□ 0.76
CTDNEP1-201ENST00000318988 YPEL4Q96NS1 127 aa19.77■□□□□ 0.76
CTDNEP1-201ENST00000318988 CNFNQ9BYD5 112 aa19.77■□□□□ 0.76
CTDNEP1-201ENST00000318988 A0A1B0GW15 77 aa19.76■□□□□ 0.75
CTDNEP1-201ENST00000318988 M0R2P5 195 aa19.76■□□□□ 0.75
CTDNEP1-201ENST00000318988 S100A8P05109 93 aa19.76■□□□□ 0.75
CTDNEP1-201ENST00000318988 FAM210BQ96KR6 192 aa19.76■□□□□ 0.75
CTDNEP1-201ENST00000318988 CAMPP49913 170 aa19.76■□□□□ 0.75
CTDNEP1-201ENST00000318988 EMP1P54849 157 aa19.76■□□□□ 0.75
CTDNEP1-201ENST00000318988 HBBP68871 147 aa19.76■□□□□ 0.75
CTDNEP1-201ENST00000318988 SPATA25Q9BR10 227 aa19.76■□□□□ 0.75
CTDNEP1-201ENST00000318988 RETNQ9HD89 108 aa19.76■□□□□ 0.75
CTDNEP1-201ENST00000318988 IGHV4-4A0A075B6R2 117 aa19.74■□□□□ 0.75
CTDNEP1-201ENST00000318988 DEFA6Q01524 100 aa19.74■□□□□ 0.75
CTDNEP1-201ENST00000318988 ZNF876PQ49A33 203 aa19.74■□□□□ 0.75
CTDNEP1-201ENST00000318988 RASL11AQ6T310 242 aa19.74■□□□□ 0.75
CTDNEP1-201ENST00000318988 SMIM15Q7Z3B0 74 aa19.74■□□□□ 0.75
CTDNEP1-201ENST00000318988 RAB4BP61018 213 aa19.73■□□□□ 0.75
CTDNEP1-201ENST00000318988 DAZ2Q13117 558 aaKnown RBP19.73■□□□□ 0.75
CTDNEP1-201ENST00000318988 DMRTA1Q5VZB9 504 aa19.73■□□□□ 0.75
CTDNEP1-201ENST00000318988 NOP10Q9NPE3 64 aaKnown RBP19.73■□□□□ 0.75
CTDNEP1-201ENST00000318988 IGHV4-28A0A0C4DH34 117 aa19.72■□□□□ 0.75
CTDNEP1-201ENST00000318988 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.72■□□□□ 0.75
CTDNEP1-201ENST00000318988 A0A1B0GXF2 115 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 COLCA2A8K830 154 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 NXPH4O95158 308 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 TRGC1P0CF51 173 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 COX19Q49B96 90 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 IL17DQ8TAD2 202 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 MSRB1Q9NZV6 116 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 TRGV1A0A0A0MS02 117 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 PLAC8L1A1L4L8 177 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 Q8NAQ8 132 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 PTH2Q96A98 100 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 TM2D3Q9BRN9 247 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 ZMAT4Q9H898 229 aa19.71■□□□□ 0.75
CTDNEP1-201ENST00000318988 MRPL16Q9NX20 251 aaKnown RBP19.7■□□□□ 0.74
CTDNEP1-201ENST00000318988 LGALS9BQ3B8N2 356 aa19.69■□□□□ 0.74
CTDNEP1-201ENST00000318988 AP1S3Q96PC3 154 aa19.69■□□□□ 0.74
CTDNEP1-201ENST00000318988 PIK3CD-AS1Q5SR53 167 aa19.68■□□□□ 0.74
CTDNEP1-201ENST00000318988 B9D2Q9BPU9 175 aa19.68■□□□□ 0.74
CTDNEP1-201ENST00000318988 DEFB4AO15263 64 aa19.67■□□□□ 0.74
CTDNEP1-201ENST00000318988 SMIM17P0DL12 118 aa19.67■□□□□ 0.74
CTDNEP1-201ENST00000318988 RAB5AP20339 215 aa19.67■□□□□ 0.74
CTDNEP1-201ENST00000318988 NDUFAF3Q9BU61 184 aa19.67■□□□□ 0.74
CTDNEP1-201ENST00000318988 RPS10P46783 165 aaKnown RBP19.66■□□□□ 0.74
CTDNEP1-201ENST00000318988 RASL10AQ92737 203 aa19.66■□□□□ 0.74
CTDNEP1-201ENST00000318988 GNB1LQ9BYB4 327 aa19.66■□□□□ 0.74
CTDNEP1-201ENST00000318988 NBEAL2Q6ZNJ1 2754 aa19.66■□□□□ 0.74
CTDNEP1-201ENST00000318988 Q6ZTI0 123 aa19.66■□□□□ 0.74
CTDNEP1-201ENST00000318988 TMEM191AQ9H0A3 160 aa19.65■□□□□ 0.74
CTDNEP1-201ENST00000318988 LYRM9A8MSI8 78 aa19.64■□□□□ 0.73
CTDNEP1-201ENST00000318988 A8MWV9 139 aa19.64■□□□□ 0.73
CTDNEP1-201ENST00000318988 HLA-DQA1P01909 254 aa19.64■□□□□ 0.73
CTDNEP1-201ENST00000318988 MT-ND6P03923 174 aa19.64■□□□□ 0.73
CTDNEP1-201ENST00000318988 EVI2AP22794 236 aa19.64■□□□□ 0.73
CTDNEP1-201ENST00000318988 TMEM136Q6ZRR5 245 aa19.64■□□□□ 0.73
CTDNEP1-201ENST00000318988 GAGE12BA1L429 117 aa19.63■□□□□ 0.73
CTDNEP1-201ENST00000318988 GAGE7O76087 117 aa19.63■□□□□ 0.73
CTDNEP1-201ENST00000318988 GAGE12FP0CL80 117 aa19.63■□□□□ 0.73
CTDNEP1-201ENST00000318988 GAGE12GP0CL81 117 aa19.63■□□□□ 0.73
CTDNEP1-201ENST00000318988 GAGE12IP0CL82 117 aa19.63■□□□□ 0.73
CTDNEP1-201ENST00000318988 C14orf178Q8N769 122 aaPredicted RBP19.63■□□□□ 0.73
CTDNEP1-201ENST00000318988 FRZBQ92765 325 aa19.63■□□□□ 0.73
CTDNEP1-201ENST00000318988 MUC4Q99102 2169 aa19.63■□□□□ 0.73
CTDNEP1-201ENST00000318988 TRGV2A0A075B6R0 118 aa19.62■□□□□ 0.73
CTDNEP1-201ENST00000318988 FAM222AQ5U5X8 452 aa19.62■□□□□ 0.73
CTDNEP1-201ENST00000318988 DPH3P1Q9H4G8 78 aa19.62■□□□□ 0.73
CTDNEP1-201ENST00000318988 TRAPPC1Q9Y5R8 145 aa19.62■□□□□ 0.73
CTDNEP1-201ENST00000318988 GATD1Q8NB37 220 aa19.61■□□□□ 0.73
CTDNEP1-201ENST00000318988 JPT2Q9H910 190 aa19.61■□□□□ 0.73
CTDNEP1-201ENST00000318988 SPART-AS1P0CW21 52 aa19.61■□□□□ 0.73
CTDNEP1-201ENST00000318988 FAM74A4Q5TZK3 123 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms