RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 KIAA1644Q3SXP7 199 aa16.46■□□□□ 0.23
IRF3-201ENST00000309877 GATD1Q8NB37 220 aa16.46■□□□□ 0.23
IRF3-201ENST00000309877 MSRB1Q9NZV6 116 aa16.46■□□□□ 0.23
IRF3-201ENST00000309877 IGHV4-4A0A075B6R2 117 aa16.46■□□□□ 0.23
IRF3-201ENST00000309877 ZNF493Q6ZR52 646 aa16.46■□□□□ 0.23
IRF3-201ENST00000309877 TMEM256Q8N2U0 113 aa16.46■□□□□ 0.23
IRF3-201ENST00000309877 MDFICQ9P1T7 246 aa16.46■□□□□ 0.23
IRF3-201ENST00000309877 NOTCH3Q9UM47 2321 aa16.46■□□□□ 0.22
IRF3-201ENST00000309877 M0R381 172 aa16.45■□□□□ 0.22
IRF3-201ENST00000309877 MDFIQ99750 246 aa16.45■□□□□ 0.22
IRF3-201ENST00000309877 LINC00467Q9BRT7 94 aa16.45■□□□□ 0.22
IRF3-201ENST00000309877 STAB1Q9NY15 2570 aa16.45■□□□□ 0.22
IRF3-201ENST00000309877 IGHV3OR16-12A0A075B7B8 117 aa16.44■□□□□ 0.22
IRF3-201ENST00000309877 SPRY2O43597 315 aa16.44■□□□□ 0.22
IRF3-201ENST00000309877 GIG44P09565 113 aaPredicted RBP16.44■□□□□ 0.22
IRF3-201ENST00000309877 SMIM15Q7Z3B0 74 aa16.44■□□□□ 0.22
IRF3-201ENST00000309877 C1orf158Q8N1D5 194 aa16.44■□□□□ 0.22
IRF3-201ENST00000309877 CSTL1Q9H114 145 aa16.43■□□□□ 0.22
IRF3-201ENST00000309877 ZMAT5Q9UDW3 170 aaKnown RBP16.43■□□□□ 0.22
IRF3-201ENST00000309877 COL6A5A8TX70 2615 aa16.43■□□□□ 0.22
IRF3-201ENST00000309877 NDUFA6P56556 154 aa16.43■□□□□ 0.22
IRF3-201ENST00000309877 C9orf85Q96MD7 179 aa16.43■□□□□ 0.22
IRF3-201ENST00000309877 TMEM191AQ9H0A3 160 aa16.43■□□□□ 0.22
IRF3-201ENST00000309877 GOLT1BQ9Y3E0 138 aa16.43■□□□□ 0.22
IRF3-201ENST00000309877 TRRAPQ9Y4A5 3859 aa16.42■□□□□ 0.22
IRF3-201ENST00000309877 FAM104BQ5XKR9 115 aa16.41■□□□□ 0.22
IRF3-201ENST00000309877 LOC102724200A0A096LPH7 203 aaPredicted RBP16.4■□□□□ 0.22
IRF3-201ENST00000309877 PRM2P04554 102 aa16.4■□□□□ 0.22
IRF3-201ENST00000309877 AMN1Q8IY45 258 aa16.4■□□□□ 0.22
IRF3-201ENST00000309877 SRIP30626 198 aa16.4■□□□□ 0.22
IRF3-201ENST00000309877 ZNF415Q09FC8 603 aa16.4■□□□□ 0.22
IRF3-201ENST00000309877 DMRTA1Q5VZB9 504 aa16.4■□□□□ 0.22
IRF3-201ENST00000309877 KRTAP10-11P60412 298 aa16.39■□□□□ 0.21
IRF3-201ENST00000309877 EGFEM1PQ0D2K5 195 aa16.39■□□□□ 0.21
IRF3-201ENST00000309877 SYT8Q8NBV8 401 aa16.39■□□□□ 0.21
IRF3-201ENST00000309877 NXPH4O95158 308 aa16.38■□□□□ 0.21
IRF3-201ENST00000309877 EVI2AP22794 236 aa16.38■□□□□ 0.21
IRF3-201ENST00000309877 LURAP1LQ8IV03 231 aa16.38■□□□□ 0.21
IRF3-201ENST00000309877 SNRPEP62304 92 aaKnown RBP16.37■□□□□ 0.21
IRF3-201ENST00000309877 CSNK1G2-AS1Q8NCQ2 148 aa16.37■□□□□ 0.21
IRF3-201ENST00000309877 AP1S3Q96PC3 154 aa16.37■□□□□ 0.21
IRF3-201ENST00000309877 ALKBH7Q9BT30 221 aaPredicted RBP16.37■□□□□ 0.21
IRF3-201ENST00000309877 APOC4P55056 127 aa16.36■□□□□ 0.21
IRF3-201ENST00000309877 RCHY1Q96PM5 261 aa16.36■□□□□ 0.21
IRF3-201ENST00000309877 GSN-AS1Q9NRJ2 163 aa16.36■□□□□ 0.21
IRF3-201ENST00000309877 G3V4G9 280 aa16.35■□□□□ 0.21
IRF3-201ENST00000309877 AZU1P20160 251 aa16.35■□□□□ 0.21
IRF3-201ENST00000309877 MRPL51Q4U2R6 128 aaKnown RBP16.35■□□□□ 0.21
IRF3-201ENST00000309877 KIR2DL5BA0A0G2JN68 375 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 KIR2DL5BA0A0G2JPC4 375 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 C5orf52A6NGY3 159 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 RAB4AP20338 218 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 ZNF876PQ49A33 203 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 KIR2DL5AQ8N109 375 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 C14orf178Q8N769 122 aaPredicted RBP16.34■□□□□ 0.21
IRF3-201ENST00000309877 KIR2DL5BQ8NHK3 375 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 IGHV4-30-4P0DP06 118 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 BAGE3Q86Y29 109 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 C11orf72Q8NBR9 251 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 RNF185Q96GF1 192 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 SPXQ9BT56 116 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 DPH3P1Q9H4G8 78 aa16.34■□□□□ 0.21
IRF3-201ENST00000309877 M0R2P5 195 aa16.33■□□□□ 0.2
IRF3-201ENST00000309877 SMIM17P0DL12 118 aa16.33■□□□□ 0.2
IRF3-201ENST00000309877 CKS2P33552 79 aa16.33■□□□□ 0.2
IRF3-201ENST00000309877 Q0VG73 95 aa16.33■□□□□ 0.2
IRF3-201ENST00000309877 OR10J3Q5JRS4 329 aa16.33■□□□□ 0.2
IRF3-201ENST00000309877 ZNF705AQ6ZN79 300 aaPredicted RBP16.33■□□□□ 0.2
IRF3-201ENST00000309877 D6R8Y8 96 aa16.32■□□□□ 0.2
IRF3-201ENST00000309877 ORMDL3Q8N138 153 aa16.32■□□□□ 0.2
IRF3-201ENST00000309877 TMEM263Q8WUH6 116 aaKnown RBP16.32■□□□□ 0.2
IRF3-201ENST00000309877 COA6Q5JTJ3 125 aaKnown RBP16.31■□□□□ 0.2
IRF3-201ENST00000309877 SAMD5Q5TGI4 173 aa16.31■□□□□ 0.2
IRF3-201ENST00000309877 RRN3P1Q2M238 152 aa16.3■□□□□ 0.2
IRF3-201ENST00000309877 C18orf32Q8TCD1 76 aa16.3■□□□□ 0.2
IRF3-201ENST00000309877 RNASE8Q8TDE3 154 aaKnown RBP16.3■□□□□ 0.2
IRF3-201ENST00000309877 PRELID3AQ96N28 172 aa16.3■□□□□ 0.2
IRF3-201ENST00000309877 JPT2Q9H910 190 aa16.3■□□□□ 0.2
IRF3-201ENST00000309877 U3KQK5 164 aa16.3■□□□□ 0.2
IRF3-201ENST00000309877 PPBPP02775 128 aa16.3■□□□□ 0.2
IRF3-201ENST00000309877 HOXA5P20719 270 aa16.3■□□□□ 0.2
IRF3-201ENST00000309877 MUC4Q99102 2169 aa16.29■□□□□ 0.2
IRF3-201ENST00000309877 SMKR1H3BMG3 65 aa16.29■□□□□ 0.2
IRF3-201ENST00000309877 MGPP08493 103 aa16.29■□□□□ 0.2
IRF3-201ENST00000309877 IQCJQ1A5X6 159 aa16.29■□□□□ 0.2
IRF3-201ENST00000309877 PTH2Q96A98 100 aa16.29■□□□□ 0.2
IRF3-201ENST00000309877 C16orf74Q96GX8 76 aa16.29■□□□□ 0.2
IRF3-201ENST00000309877 LOC105371267A0A1B0GV96 52 aa16.28■□□□□ 0.2
IRF3-201ENST00000309877 NCR2O95944 276 aa16.28■□□□□ 0.2
IRF3-201ENST00000309877 A0A087WWL8 130 aa16.27■□□□□ 0.2
IRF3-201ENST00000309877 UBE2CO00762 179 aa16.27■□□□□ 0.2
IRF3-201ENST00000309877 PIK3CD-AS1Q5SR53 167 aa16.27■□□□□ 0.2
IRF3-201ENST00000309877 MRAP2Q96G30 205 aa16.27■□□□□ 0.19
IRF3-201ENST00000309877 KIF25-AS1Q9Y6Z4 181 aa16.27■□□□□ 0.19
IRF3-201ENST00000309877 PDZD11Q5EBL8 140 aa16.26■□□□□ 0.19
IRF3-201ENST00000309877 FAM74A4Q5TZK3 123 aa16.26■□□□□ 0.19
IRF3-201ENST00000309877 IL17DQ8TAD2 202 aa16.26■□□□□ 0.19
IRF3-201ENST00000309877 MRPL16Q9NX20 251 aaKnown RBP16.26■□□□□ 0.19
IRF3-201ENST00000309877 SERF1AO75920 110 aa16.25■□□□□ 0.19
IRF3-201ENST00000309877 DEFB135Q30KP9 77 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms