RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 H7C1H1 209 aa12.56□□□□□ -0.4
SSH3-201ENST00000308127 DUSP14O95147 198 aaKnown RBP12.56□□□□□ -0.4
SSH3-201ENST00000308127 HLA-DRB4P13762 266 aa12.56□□□□□ -0.4
SSH3-201ENST00000308127 RAB9AP51151 201 aa12.56□□□□□ -0.4
SSH3-201ENST00000308127 C1orf122Q6ZSJ8 110 aa12.56□□□□□ -0.4
SSH3-201ENST00000308127 HLA-DRB4X5D2U9 266 aa12.56□□□□□ -0.4
SSH3-201ENST00000308127 A0A087WWL8 130 aa12.55□□□□□ -0.4
SSH3-201ENST00000308127 IGKV3-20P01619 116 aa12.55□□□□□ -0.4
SSH3-201ENST00000308127 FOXI2Q6ZQN5 318 aa12.55□□□□□ -0.4
SSH3-201ENST00000308127 PRADC1Q9BSG0 188 aa12.55□□□□□ -0.4
SSH3-201ENST00000308127 AZU1P20160 251 aa12.55□□□□□ -0.4
SSH3-201ENST00000308127 SLC25A16P16260 332 aa12.55□□□□□ -0.4
SSH3-201ENST00000308127 LMO4P61968 165 aa12.55□□□□□ -0.4
SSH3-201ENST00000308127 SCGB1D4Q6XE38 83 aa12.55□□□□□ -0.4
SSH3-201ENST00000308127 BAALCQ8WXS3 180 aa12.55□□□□□ -0.4
SSH3-201ENST00000308127 SPOCK3Q9BQ16 436 aa12.55□□□□□ -0.4
SSH3-201ENST00000308127 TRBV7-1A0A0A6YYK4 115 aa12.54□□□□□ -0.4
SSH3-201ENST00000308127 LGALS1P09382 135 aaKnown RBP12.54□□□□□ -0.4
SSH3-201ENST00000308127 PLNP26678 52 aa12.54□□□□□ -0.4
SSH3-201ENST00000308127 RPL39P62891 51 aaKnown RBP12.54□□□□□ -0.4
SSH3-201ENST00000308127 LY6DQ14210 128 aa12.54□□□□□ -0.4
SSH3-201ENST00000308127 OR10J6PQ8NGY7 276 aa12.54□□□□□ -0.4
SSH3-201ENST00000308127 MYMXA0A1B0GTQ4 84 aa12.54□□□□□ -0.4
SSH3-201ENST00000308127 SPANXB1Q9NS25 103 aaPredicted RBP12.54□□□□□ -0.4
SSH3-201ENST00000308127 TRBV7-3A0A075B6L6 115 aa12.53□□□□□ -0.4
SSH3-201ENST00000308127 ZNF815PA8K554 130 aa12.53□□□□□ -0.4
SSH3-201ENST00000308127 ASIPP42127 132 aa12.53□□□□□ -0.4
SSH3-201ENST00000308127 PGPEP1Q9NXJ5 209 aa12.53□□□□□ -0.4
SSH3-201ENST00000308127 RNF223E7ERA6 249 aa12.53□□□□□ -0.4
SSH3-201ENST00000308127 APOMO95445 188 aa12.53□□□□□ -0.4
SSH3-201ENST00000308127 PF4V1P10720 104 aa12.53□□□□□ -0.4
SSH3-201ENST00000308127 SAMD13Q5VXD3 122 aa12.53□□□□□ -0.4
SSH3-201ENST00000308127 U3KQE9 123 aa12.53□□□□□ -0.4
SSH3-201ENST00000308127 BLCAPP62952 87 aa12.52□□□□□ -0.4
SSH3-201ENST00000308127 FAM74A4Q5TZK3 123 aa12.52□□□□□ -0.4
SSH3-201ENST00000308127 NEXN-AS1Q8NBZ9 246 aa12.52□□□□□ -0.4
SSH3-201ENST00000308127 ITLN2Q8WWU7 325 aaPredicted RBP12.52□□□□□ -0.4
SSH3-201ENST00000308127 SPAG8Q99932 426 aaPredicted RBP12.52□□□□□ -0.4
SSH3-201ENST00000308127 MYO18BQ8IUG5 2567 aa12.52□□□□□ -0.4
SSH3-201ENST00000308127 DPH3P1Q9H4G8 78 aa12.52□□□□□ -0.41
SSH3-201ENST00000308127 LOC107984156A0A0G2JMH3 177 aa12.52□□□□□ -0.41
SSH3-201ENST00000308127 F5H697 171 aa12.52□□□□□ -0.41
SSH3-201ENST00000308127 RRN3P1Q2M238 152 aa12.52□□□□□ -0.41
SSH3-201ENST00000308127 TMEM95Q3KNT9 176 aa12.52□□□□□ -0.41
SSH3-201ENST00000308127 ARL17AQ8IVW1 177 aa12.52□□□□□ -0.41
SSH3-201ENST00000308127 MYO9AB2RTY4 2548 aa12.51□□□□□ -0.41
SSH3-201ENST00000308127 LINC01549A6NIU2 74 aa12.51□□□□□ -0.41
SSH3-201ENST00000308127 SRSF9Q13242 221 aaKnown RBP eCLIP12.51□□□□□ -0.41
SSH3-201ENST00000308127 TOMM6Q96B49 74 aa12.51□□□□□ -0.41
SSH3-201ENST00000308127 MRPL16Q9NX20 251 aaKnown RBP12.51□□□□□ -0.41
SSH3-201ENST00000308127 USP9XQ93008 2570 aaPredicted RBP12.51□□□□□ -0.41
SSH3-201ENST00000308127 CACNA1AO00555 2505 aa12.51□□□□□ -0.41
SSH3-201ENST00000308127 TRAV21A0A0B4J279 112 aa12.51□□□□□ -0.41
SSH3-201ENST00000308127 C19orf84I3L1E1 186 aa12.51□□□□□ -0.41
SSH3-201ENST00000308127 IGHV4-38-2P0DP08 117 aa12.51□□□□□ -0.41
SSH3-201ENST00000308127 RNASE3P12724 160 aaKnown RBP12.51□□□□□ -0.41
SSH3-201ENST00000308127 MORN3Q6PF18 240 aaPredicted RBP12.51□□□□□ -0.41
SSH3-201ENST00000308127 C9orf139Q6ZV77 190 aa12.51□□□□□ -0.41
SSH3-201ENST00000308127 MRAP2Q96G30 205 aa12.51□□□□□ -0.41
SSH3-201ENST00000308127 A0A1B0GWB2 263 aa12.5□□□□□ -0.41
SSH3-201ENST00000308127 NBL1P41271 181 aa12.5□□□□□ -0.41
SSH3-201ENST00000308127 GAGE13Q4V321 117 aa12.5□□□□□ -0.41
SSH3-201ENST00000308127 PTH2Q96A98 100 aa12.5□□□□□ -0.41
SSH3-201ENST00000308127 ORMDL2Q53FV1 153 aa12.5□□□□□ -0.41
SSH3-201ENST00000308127 ZFP2Q6ZN57 461 aa12.5□□□□□ -0.41
SSH3-201ENST00000308127 ZNF418Q8TF45 676 aaPredicted RBP12.5□□□□□ -0.41
SSH3-201ENST00000308127 OPRPNQ99935 248 aaPredicted RBP12.5□□□□□ -0.41
SSH3-201ENST00000308127 TP53TG1Q9Y2A0 90 aa12.5□□□□□ -0.41
SSH3-201ENST00000308127 IGHV4-4A0A075B6R2 117 aa12.49□□□□□ -0.41
SSH3-201ENST00000308127 KLRB1Q12918 225 aa12.49□□□□□ -0.41
SSH3-201ENST00000308127 TLN2Q9Y4G6 2542 aa12.49□□□□□ -0.41
SSH3-201ENST00000308127 C11orf86A6NJI1 115 aa12.49□□□□□ -0.41
SSH3-201ENST00000308127 SETD2Q9BYW2 2564 aaPredicted RBP12.49□□□□□ -0.41
SSH3-201ENST00000308127 IGHV3-64A0A075B6Q5 118 aa12.48□□□□□ -0.41
SSH3-201ENST00000308127 TRAV12-2A0A075B6T6 113 aa12.48□□□□□ -0.41
SSH3-201ENST00000308127 TRAV12-3A0A0B4J271 114 aa12.48□□□□□ -0.41
SSH3-201ENST00000308127 GAGE12HA6NDE8 117 aa12.48□□□□□ -0.41
SSH3-201ENST00000308127 RHPN1-AS1Q9BWJ2 59 aa12.48□□□□□ -0.41
SSH3-201ENST00000308127 MOB4Q9Y3A3 225 aa12.48□□□□□ -0.41
SSH3-201ENST00000308127 HOXA3O43365 443 aaPredicted RBP12.48□□□□□ -0.41
SSH3-201ENST00000308127 TSHBP01222 138 aa12.48□□□□□ -0.41
SSH3-201ENST00000308127 ZNF256Q9Y2P7 627 aaPredicted RBP12.48□□□□□ -0.41
SSH3-201ENST00000308127 CRYGDP07320 174 aa12.48□□□□□ -0.41
SSH3-201ENST00000308127 PSMB2P49721 201 aa12.48□□□□□ -0.41
SSH3-201ENST00000308127 C20orf78Q9BR46 151 aa12.48□□□□□ -0.41
SSH3-201ENST00000308127 PRSS47A8MTI9 375 aa12.47□□□□□ -0.41
SSH3-201ENST00000308127 H3BUX3 64 aa12.47□□□□□ -0.41
SSH3-201ENST00000308127 MRPL53Q96EL3 112 aaKnown RBP12.47□□□□□ -0.41
SSH3-201ENST00000308127 MXRA5Q9NR99 2828 aa12.47□□□□□ -0.41
SSH3-201ENST00000308127 LINC00477Q96M19 166 aa12.47□□□□□ -0.41
SSH3-201ENST00000308127 C2CD3Q4AC94 2353 aa12.47□□□□□ -0.41
SSH3-201ENST00000308127 FAM208BQ5VWN6 2430 aa12.46□□□□□ -0.41
SSH3-201ENST00000308127 PKD1L2Q7Z442 2459 aa12.46□□□□□ -0.41
SSH3-201ENST00000308127 TRAV12-1A0A0B4J245 112 aa12.46□□□□□ -0.41
SSH3-201ENST00000308127 SOCS3O14543 225 aa12.46□□□□□ -0.41
SSH3-201ENST00000308127 F8W1H4 67 aa12.46□□□□□ -0.42
SSH3-201ENST00000308127 TSPEAR-AS2P59090 65 aa12.46□□□□□ -0.42
SSH3-201ENST00000308127 TMEM170BQ5T4T1 132 aa12.46□□□□□ -0.42
SSH3-201ENST00000308127 C10orf99Q6UWK7 81 aa12.46□□□□□ -0.42
SSH3-201ENST00000308127 SIGMAR1Q99720 223 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms