RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 A0A1B0GXF2 115 aa15.01□□□□□ -0.01
TSR1-201ENST00000301364 GAGE12HA6NDE8 117 aa15.01□□□□□ -0.01
TSR1-201ENST00000301364 AMTNQ6UX39 209 aa15.01□□□□□ -0.01
TSR1-201ENST00000301364 INAFM2P0DMQ5 153 aa15□□□□□ -0.01
TSR1-201ENST00000301364 MED12LQ86YW9 2145 aa15□□□□□ -0.01
TSR1-201ENST00000301364 DEFB130BP0DP73 79 aa15□□□□□ -0.01
TSR1-201ENST00000301364 DEFB130AP0DP74 79 aa15□□□□□ -0.01
TSR1-201ENST00000301364 Q8N7P7 452 aa14.99□□□□□ -0.01
TSR1-201ENST00000301364 DPH3Q96FX2 82 aa14.99□□□□□ -0.01
TSR1-201ENST00000301364 HIGD1BQ9P298 99 aa14.99□□□□□ -0.01
TSR1-201ENST00000301364 MAPK1IP1LQ8NDC0 245 aa14.99□□□□□ -0.01
TSR1-201ENST00000301364 TMEM243Q9BU79 118 aa14.99□□□□□ -0.01
TSR1-201ENST00000301364 C9orf47Q6ZRZ4 202 aa14.99□□□□□ -0.01
TSR1-201ENST00000301364 RNF114Q9Y508 228 aa14.99□□□□□ -0.01
TSR1-201ENST00000301364 C2orf70A6NJV1 201 aa14.98□□□□□ -0.01
TSR1-201ENST00000301364 HERVK_113P63121 156 aa14.98□□□□□ -0.01
TSR1-201ENST00000301364 EP400Q96L91 3159 aa14.98□□□□□ -0.01
TSR1-201ENST00000301364 BDP1A6H8Y1 2624 aa14.98□□□□□ -0.01
TSR1-201ENST00000301364 IGHV3-38A0A0C4DH36 116 aa14.97□□□□□ -0.01
TSR1-201ENST00000301364 PRAC2D3DTV9 90 aa14.97□□□□□ -0.01
TSR1-201ENST00000301364 PLA2G5P39877 138 aa14.96□□□□□ -0.01
TSR1-201ENST00000301364 SPATA12Q7Z6I5 190 aa14.96□□□□□ -0.01
TSR1-201ENST00000301364 FBXL19-AS1Q494R0 122 aa14.96□□□□□ -0.01
TSR1-201ENST00000301364 RPL39LQ96EH5 51 aaKnown RBP14.96□□□□□ -0.01
TSR1-201ENST00000301364 FANCD2OSQ96PS1 177 aa14.96□□□□□ -0.01
TSR1-201ENST00000301364 TNCP24821 2201 aa14.96□□□□□ -0.01
TSR1-201ENST00000301364 IGLL5B9A064 214 aa14.96□□□□□ -0.01
TSR1-201ENST00000301364 C5orf56Q8N8D9 126 aa14.96□□□□□ -0.01
TSR1-201ENST00000301364 LAMTOR3Q9UHA4 124 aa14.96□□□□□ -0.01
TSR1-201ENST00000301364 TRAV12-1A0A0B4J245 112 aa14.96□□□□□ -0.01
TSR1-201ENST00000301364 GAGE2AQ6NT46 116 aa14.96□□□□□ -0.01
TSR1-201ENST00000301364 TNRC6AQ8NDV7 1962 aaKnown RBP14.96□□□□□ -0.02
TSR1-201ENST00000301364 MLST8Q9BVC4 326 aa14.96□□□□□ -0.02
TSR1-201ENST00000301364 VWC2LB2RUY7 222 aa14.95□□□□□ -0.02
TSR1-201ENST00000301364 TAX1BP3O14907 124 aa14.95□□□□□ -0.02
TSR1-201ENST00000301364 VPREB3Q9UKI3 123 aa14.95□□□□□ -0.02
TSR1-201ENST00000301364 CFC1BP0CG36 223 aa14.95□□□□□ -0.02
TSR1-201ENST00000301364 CFC1P0CG37 223 aa14.95□□□□□ -0.02
TSR1-201ENST00000301364 DEFB112Q30KQ8 113 aa14.95□□□□□ -0.02
TSR1-201ENST00000301364 AJUBAQ96IF1 538 aa14.95□□□□□ -0.02
TSR1-201ENST00000301364 HOXD3P31249 432 aaPredicted RBP14.94□□□□□ -0.02
TSR1-201ENST00000301364 HIST1H4AP62805 103 aaKnown RBP14.94□□□□□ -0.02
TSR1-201ENST00000301364 C1orf229Q6ZS94 237 aaPredicted RBP14.94□□□□□ -0.02
TSR1-201ENST00000301364 MBD6Q96DN6 1003 aa14.94□□□□□ -0.02
TSR1-201ENST00000301364 CHD3Q12873 2000 aaKnown RBP14.94□□□□□ -0.02
TSR1-201ENST00000301364 IGHV4-61A0A0C4DH41 118 aa14.94□□□□□ -0.02
TSR1-201ENST00000301364 IGHV4-59P01825 116 aa14.94□□□□□ -0.02
TSR1-201ENST00000301364 MED14OSP0DP75 135 aa14.94□□□□□ -0.02
TSR1-201ENST00000301364 UTF1Q5T230 341 aa14.94□□□□□ -0.02
TSR1-201ENST00000301364 SUMO4Q6EEV6 95 aa14.94□□□□□ -0.02
TSR1-201ENST00000301364 ZFP2Q6ZN57 461 aa14.93□□□□□ -0.02
TSR1-201ENST00000301364 SPRY2O43597 315 aa14.93□□□□□ -0.02
TSR1-201ENST00000301364 GAGE7O76087 117 aa14.93□□□□□ -0.02
TSR1-201ENST00000301364 GAGE12FP0CL80 117 aa14.93□□□□□ -0.02
TSR1-201ENST00000301364 GAGE12GP0CL81 117 aa14.93□□□□□ -0.02
TSR1-201ENST00000301364 GAGE12IP0CL82 117 aa14.93□□□□□ -0.02
TSR1-201ENST00000301364 ADORA2A-AS1P86434 159 aa14.92□□□□□ -0.02
TSR1-201ENST00000301364 Q96MF0 132 aa14.92□□□□□ -0.02
TSR1-201ENST00000301364 SPANXDQ9BXN6 97 aa14.92□□□□□ -0.02
TSR1-201ENST00000301364 LINC00322Q6ZN03 302 aaPredicted RBP14.92□□□□□ -0.02
TSR1-201ENST00000301364 BLCAPP62952 87 aa14.91□□□□□ -0.02
TSR1-201ENST00000301364 CFHR3Q02985 330 aa14.91□□□□□ -0.02
TSR1-201ENST00000301364 NUP210LQ5VU65 1888 aa14.91□□□□□ -0.02
TSR1-201ENST00000301364 K7EMT4 169 aa14.91□□□□□ -0.02
TSR1-201ENST00000301364 FXYD2P54710 66 aa14.9□□□□□ -0.02
TSR1-201ENST00000301364 DYSFO75923 2080 aa14.9□□□□□ -0.02
TSR1-201ENST00000301364 IGHV4-38-2P0DP08 117 aa14.9□□□□□ -0.02
TSR1-201ENST00000301364 ZFP36P26651 326 aaKnown RBP14.9□□□□□ -0.02
TSR1-201ENST00000301364 PRR14LQ5THK1 2151 aa14.9□□□□□ -0.02
TSR1-201ENST00000301364 TRAV13-2A0A0B4J235 113 aa14.9□□□□□ -0.02
TSR1-201ENST00000301364 ODF1Q14990 250 aa14.9□□□□□ -0.02
TSR1-201ENST00000301364 GDF5OSQ5U4N7 250 aa14.9□□□□□ -0.02
TSR1-201ENST00000301364 FAM208BQ5VWN6 2430 aa14.89□□□□□ -0.03
TSR1-201ENST00000301364 SOCS3O14543 225 aa14.89□□□□□ -0.03
TSR1-201ENST00000301364 PFN2P35080 140 aa14.89□□□□□ -0.03
TSR1-201ENST00000301364 RNF152Q8N8N0 203 aa14.89□□□□□ -0.03
TSR1-201ENST00000301364 SIRPDQ9H106 197 aa14.89□□□□□ -0.03
TSR1-201ENST00000301364 CARD19Q96LW7 228 aa14.89□□□□□ -0.03
TSR1-201ENST00000301364 SPG11Q96JI7 2443 aa14.89□□□□□ -0.03
TSR1-201ENST00000301364 PRSS47A8MTI9 375 aa14.89□□□□□ -0.03
TSR1-201ENST00000301364 TEX48A0A1B0GUV7 120 aa14.89□□□□□ -0.03
TSR1-201ENST00000301364 TOMM6Q96B49 74 aa14.89□□□□□ -0.03
TSR1-201ENST00000301364 MUC6Q6W4X9 2439 aa14.89□□□□□ -0.03
TSR1-201ENST00000301364 GAGE6Q13070 117 aa14.88□□□□□ -0.03
TSR1-201ENST00000301364 RNASE8Q8TDE3 154 aaKnown RBP14.88□□□□□ -0.03
TSR1-201ENST00000301364 RNASE13Q5GAN3 156 aaKnown RBP14.88□□□□□ -0.03
TSR1-201ENST00000301364 FSTL3O95633 263 aa14.87□□□□□ -0.03
TSR1-201ENST00000301364 Q8NA96 180 aa14.87□□□□□ -0.03
TSR1-201ENST00000301364 U3KQE9 123 aa14.87□□□□□ -0.03
TSR1-201ENST00000301364 NTN5Q8WTR8 489 aaPredicted RBP14.87□□□□□ -0.03
TSR1-201ENST00000301364 PTPRQQ9UMZ3 2332 aa14.87□□□□□ -0.03
TSR1-201ENST00000301364 E9PLD3 99 aa14.87□□□□□ -0.03
TSR1-201ENST00000301364 C10orf105Q8TEF2 133 aa14.87□□□□□ -0.03
TSR1-201ENST00000301364 TIMM17AQ99595 171 aa14.87□□□□□ -0.03
TSR1-201ENST00000301364 TTTY13Q9BZ97 58 aa14.86□□□□□ -0.03
TSR1-201ENST00000301364 IFITM1P13164 125 aa14.86□□□□□ -0.03
TSR1-201ENST00000301364 DAZAP2Q15038 168 aaPredicted RBP14.86□□□□□ -0.03
TSR1-201ENST00000301364 ACACBO00763 2458 aa14.85□□□□□ -0.03
TSR1-201ENST00000301364 IGHV4-30-2A0A087WSY4 118 aa14.85□□□□□ -0.03
TSR1-201ENST00000301364 IGHG2P01859 326 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms