RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 FAM74A4Q5TZK3 123 aa10.27□□□□□ -0.77
CDH8-201ENST00000299345 ZNF462Q96JM2 2506 aa10.27□□□□□ -0.77
CDH8-201ENST00000299345 FLNCQ14315 2725 aa10.27□□□□□ -0.77
CDH8-201ENST00000299345 CFAP46Q8IYW2 2715 aa10.27□□□□□ -0.77
CDH8-201ENST00000299345 EDN2P20800 178 aa10.27□□□□□ -0.77
CDH8-201ENST00000299345 C20orf78Q9BR46 151 aa10.27□□□□□ -0.77
CDH8-201ENST00000299345 TRBV7-9A0A0J9YWB2 115 aa10.26□□□□□ -0.77
CDH8-201ENST00000299345 GAGE10A6NGK3 116 aa10.26□□□□□ -0.77
CDH8-201ENST00000299345 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
CDH8-201ENST00000299345 IGLV2-18A0A075B6J9 118 aa10.26□□□□□ -0.77
CDH8-201ENST00000299345 CSTL1Q9H114 145 aa10.26□□□□□ -0.77
CDH8-201ENST00000299345 PSMB8P28062 276 aa10.25□□□□□ -0.77
CDH8-201ENST00000299345 SORL1Q92673 2214 aa10.25□□□□□ -0.77
CDH8-201ENST00000299345 MED14OSP0DP75 135 aa10.25□□□□□ -0.77
CDH8-201ENST00000299345 CBY1Q9Y3M2 126 aa10.25□□□□□ -0.77
CDH8-201ENST00000299345 SVEP1Q4LDE5 3571 aa10.25□□□□□ -0.77
CDH8-201ENST00000299345 LINC01546A6NGU7 62 aa10.25□□□□□ -0.77
CDH8-201ENST00000299345 H3BUT2 72 aa10.25□□□□□ -0.77
CDH8-201ENST00000299345 GTF2H5Q6ZYL4 71 aa10.25□□□□□ -0.77
CDH8-201ENST00000299345 BEX4Q9NWD9 120 aaPredicted RBP10.25□□□□□ -0.77
CDH8-201ENST00000299345 A0A087WWL8 130 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 A0A087WX48 190 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 PLNP26678 52 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 RASL10AQ92737 203 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 NAA38Q9BRA0 125 aaKnown RBP10.24□□□□□ -0.77
CDH8-201ENST00000299345 VPREB3Q9UKI3 123 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 CHTOPQ9Y3Y2 248 aaKnown RBP10.24□□□□□ -0.77
CDH8-201ENST00000299345 H7C1H1 209 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 C2orf66Q6UXQ4 117 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 CENPEQ02224 2701 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 TRAV12-2A0A075B6T6 113 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 SYT8Q8NBV8 401 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 DEFB104AQ8WTQ1 72 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 KIR2DL4Q99706 377 aa10.24□□□□□ -0.77
CDH8-201ENST00000299345 IGKV2D-26A0A0A0MRZ7 120 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 OR11H12B2RN74 326 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
CDH8-201ENST00000299345 HTN1P15515 57 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 CFHR3Q02985 330 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 OR11H1Q8NG94 326 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 OR11H2Q8NH07 326 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 ANKRD17O75179 2603 aaKnown RBP10.23□□□□□ -0.77
CDH8-201ENST00000299345 IGSF10Q6WRI0 2623 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 RNF151Q2KHN1 245 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 NEGR1Q7Z3B1 354 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 CHAC1Q9BUX1 264 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 PRSS47A8MTI9 375 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 DCANP1Q8TF63 244 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 HHLA3Q9XRX5 114 aa10.23□□□□□ -0.77
CDH8-201ENST00000299345 H3BRM9 83 aa10.22□□□□□ -0.77
CDH8-201ENST00000299345 ZNF56Q15929 161 aa10.22□□□□□ -0.77
CDH8-201ENST00000299345 TMEM89A2RUT3 159 aa10.22□□□□□ -0.77
CDH8-201ENST00000299345 F8VRH5 84 aa10.22□□□□□ -0.77
CDH8-201ENST00000299345 SMIM13P0DJ93 91 aa10.22□□□□□ -0.77
CDH8-201ENST00000299345 SPINK13Q1W4C9 94 aa10.22□□□□□ -0.77
CDH8-201ENST00000299345 CYSLTR1Q9Y271 337 aa10.22□□□□□ -0.77
CDH8-201ENST00000299345 DUSP14O95147 198 aaKnown RBP10.22□□□□□ -0.77
CDH8-201ENST00000299345 ELANEP08246 267 aa10.22□□□□□ -0.77
CDH8-201ENST00000299345 LGALS1P09382 135 aaKnown RBP10.22□□□□□ -0.77
CDH8-201ENST00000299345 ZMAT4Q9H898 229 aa10.21□□□□□ -0.77
CDH8-201ENST00000299345 KLLNB2CW77 178 aa10.21□□□□□ -0.77
CDH8-201ENST00000299345 K7EMI3 77 aa10.21□□□□□ -0.77
CDH8-201ENST00000299345 HOXA3O43365 443 aaPredicted RBP10.21□□□□□ -0.77
CDH8-201ENST00000299345 JPT2Q9H910 190 aa10.21□□□□□ -0.77
CDH8-201ENST00000299345 MYO9AB2RTY4 2548 aa10.21□□□□□ -0.78
CDH8-201ENST00000299345 HOXD3P31249 432 aaPredicted RBP10.21□□□□□ -0.78
CDH8-201ENST00000299345 TRBV25-1A0A075B6N4 114 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 IGHV4OR15-8A0A075B7B6 117 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 A0A087WW49 117 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 C9orf118A6NHY6 69 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 ADAMTSL5Q6ZMM2 481 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 FAM19A4Q96LR4 140 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 HIST1H4GQ99525 98 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 ABCA12Q86UK0 2595 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 CDKN1BP46527 198 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 ZNF580Q9UK33 172 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 ZNF256Q9Y2P7 627 aaPredicted RBP10.2□□□□□ -0.78
CDH8-201ENST00000299345 TLN2Q9Y4G6 2542 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 VCYO14598 125 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 TOMM6Q96B49 74 aa10.2□□□□□ -0.78
CDH8-201ENST00000299345 A0A0J9YX75 114 aa10.19□□□□□ -0.78
CDH8-201ENST00000299345 FABP2P12104 132 aa10.19□□□□□ -0.78
CDH8-201ENST00000299345 HLA-DRB4P13762 266 aa10.19□□□□□ -0.78
CDH8-201ENST00000299345 APRG1Q8IVJ8 170 aa10.19□□□□□ -0.78
CDH8-201ENST00000299345 HLA-DRB4X5D2U9 266 aa10.19□□□□□ -0.78
CDH8-201ENST00000299345 TCTEX1D4Q5JR98 221 aa10.19□□□□□ -0.78
CDH8-201ENST00000299345 Q5PR19 223 aa10.19□□□□□ -0.78
CDH8-201ENST00000299345 NHP2Q9NX24 153 aaKnown RBP10.19□□□□□ -0.78
CDH8-201ENST00000299345 IGHV1OR15-1A0A075B7D0 117 aa10.18□□□□□ -0.78
CDH8-201ENST00000299345 TRAV12-1A0A0B4J245 112 aa10.18□□□□□ -0.78
CDH8-201ENST00000299345 K7EQG2 157 aa10.18□□□□□ -0.78
CDH8-201ENST00000299345 SCGB1D4Q6XE38 83 aa10.18□□□□□ -0.78
CDH8-201ENST00000299345 UBE2E2Q96LR5 201 aa10.18□□□□□ -0.78
CDH8-201ENST00000299345 HIGD1BQ9P298 99 aa10.18□□□□□ -0.78
CDH8-201ENST00000299345 SUMO4Q6EEV6 95 aa10.18□□□□□ -0.78
CDH8-201ENST00000299345 TP53TG1Q9Y2A0 90 aa10.18□□□□□ -0.78
CDH8-201ENST00000299345 GAGE12BA1L429 117 aa10.18□□□□□ -0.78
CDH8-201ENST00000299345 SDHAF1A6NFY7 115 aa10.18□□□□□ -0.78
CDH8-201ENST00000299345 PRSS29PA6NIE9 313 aa10.18□□□□□ -0.78
CDH8-201ENST00000299345 RNASE8Q8TDE3 154 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms