RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 HLA-DRB4X5D2U9 266 aa16.85■□□□□ 0.29
VSTM4-201ENST00000298454 SETXQ7Z333 2677 aaKnown RBP16.85■□□□□ 0.29
VSTM4-201ENST00000298454 H3BMM0 161 aa16.84■□□□□ 0.29
VSTM4-201ENST00000298454 TCF21O43680 179 aa16.84■□□□□ 0.29
VSTM4-201ENST00000298454 CD7P09564 240 aa16.84■□□□□ 0.29
VSTM4-201ENST00000298454 GATA1P15976 413 aaPredicted RBP16.84■□□□□ 0.29
VSTM4-201ENST00000298454 FA2HQ7L5A8 372 aa16.84■□□□□ 0.29
VSTM4-201ENST00000298454 ZNF664Q8N3J9 261 aa16.84■□□□□ 0.29
VSTM4-201ENST00000298454 SPAG8Q99932 426 aaPredicted RBP16.84■□□□□ 0.29
VSTM4-201ENST00000298454 AP5S1Q9NUS5 200 aa16.84■□□□□ 0.29
VSTM4-201ENST00000298454 PPBPP02775 128 aa16.84■□□□□ 0.29
VSTM4-201ENST00000298454 KRTAP10-3P60369 221 aa16.84■□□□□ 0.29
VSTM4-201ENST00000298454 OR4C46A6NHA9 309 aa16.83■□□□□ 0.28
VSTM4-201ENST00000298454 HIVEP1P15822 2718 aa16.82■□□□□ 0.28
VSTM4-201ENST00000298454 RBMY1BA6NDE4 496 aaKnown RBP16.82■□□□□ 0.28
VSTM4-201ENST00000298454 RBMY1EA6NEQ0 496 aaKnown RBP16.82■□□□□ 0.28
VSTM4-201ENST00000298454 RBMY1DP0C7P1 496 aaKnown RBP16.82■□□□□ 0.28
VSTM4-201ENST00000298454 TDRG1Q3Y452 100 aa16.82■□□□□ 0.28
VSTM4-201ENST00000298454 TRAV26-2A0A0B4J265 109 aa16.82■□□□□ 0.28
VSTM4-201ENST00000298454 LINC00587B1AMM8 73 aa16.82■□□□□ 0.28
VSTM4-201ENST00000298454 LINC00173Q6ZV60 143 aa16.82■□□□□ 0.28
VSTM4-201ENST00000298454 WNK1Q9H4A3 2382 aa16.81■□□□□ 0.28
VSTM4-201ENST00000298454 TRAV25A0A0B4J276 109 aa16.81■□□□□ 0.28
VSTM4-201ENST00000298454 A8MTW9 85 aa16.81■□□□□ 0.28
VSTM4-201ENST00000298454 TNFRSF6BO95407 300 aa16.81■□□□□ 0.28
VSTM4-201ENST00000298454 NSD1Q96L73 2696 aaPredicted RBP16.8■□□□□ 0.28
VSTM4-201ENST00000298454 LEPROTL1O95214 131 aa16.8■□□□□ 0.28
VSTM4-201ENST00000298454 FOSL1P15407 271 aa16.8■□□□□ 0.28
VSTM4-201ENST00000298454 PKIAP61925 76 aa16.8■□□□□ 0.28
VSTM4-201ENST00000298454 CRXO43186 299 aaPredicted RBP16.79■□□□□ 0.28
VSTM4-201ENST00000298454 RBMY1A1P0DJD3 496 aaKnown RBP16.79■□□□□ 0.28
VSTM4-201ENST00000298454 RBMY1CP0DJD4 496 aa16.79■□□□□ 0.28
VSTM4-201ENST00000298454 RBMY1FQ15415 496 aaKnown RBP16.79■□□□□ 0.28
VSTM4-201ENST00000298454 C14orf178Q8N769 122 aaPredicted RBP16.79■□□□□ 0.28
VSTM4-201ENST00000298454 IGHV1OR15-1A0A075B7D0 117 aa16.79■□□□□ 0.28
VSTM4-201ENST00000298454 Q8N1Y9 231 aa16.79■□□□□ 0.28
VSTM4-201ENST00000298454 ODF3L2Q3SX64 289 aa16.78■□□□□ 0.28
VSTM4-201ENST00000298454 TEX43Q6ZNM6 134 aa16.78■□□□□ 0.28
VSTM4-201ENST00000298454 MAP1LC3AQ9H492 121 aa16.78■□□□□ 0.28
VSTM4-201ENST00000298454 MDFICQ9P1T7 246 aa16.78■□□□□ 0.28
VSTM4-201ENST00000298454 LAMTOR2Q9Y2Q5 125 aa16.78■□□□□ 0.28
VSTM4-201ENST00000298454 FN1P02751 2386 aaKnown RBP16.78■□□□□ 0.28
VSTM4-201ENST00000298454 IGHV3-16A0A0C4DH30 117 aa16.78■□□□□ 0.28
VSTM4-201ENST00000298454 SAP30O75446 220 aa16.78■□□□□ 0.28
VSTM4-201ENST00000298454 BTF3P20290 206 aaKnown RBP16.78■□□□□ 0.28
VSTM4-201ENST00000298454 NXPH4O95158 308 aa16.77■□□□□ 0.28
VSTM4-201ENST00000298454 OR2K2Q8NGT1 345 aa16.77■□□□□ 0.28
VSTM4-201ENST00000298454 TSTD3H0UI37 97 aa16.77■□□□□ 0.27
VSTM4-201ENST00000298454 A0A096LNJ9 63 aa16.76■□□□□ 0.27
VSTM4-201ENST00000298454 SPATA12Q7Z6I5 190 aa16.76■□□□□ 0.27
VSTM4-201ENST00000298454 NRACQ8N912 160 aa16.76■□□□□ 0.27
VSTM4-201ENST00000298454 DPH3P1Q9H4G8 78 aa16.76■□□□□ 0.27
VSTM4-201ENST00000298454 MUC4Q99102 2169 aa16.76■□□□□ 0.27
VSTM4-201ENST00000298454 NIPBLQ6KC79 2804 aaeCLIP16.75■□□□□ 0.27
VSTM4-201ENST00000298454 CRLF1O75462 422 aa16.75■□□□□ 0.27
VSTM4-201ENST00000298454 C9orf85Q96MD7 179 aa16.75■□□□□ 0.27
VSTM4-201ENST00000298454 AP1S3Q96PC3 154 aa16.75■□□□□ 0.27
VSTM4-201ENST00000298454 TMEM70Q9BUB7 260 aa16.75■□□□□ 0.27
VSTM4-201ENST00000298454 NDUFA11Q86Y39 141 aa16.74■□□□□ 0.27
VSTM4-201ENST00000298454 MRAP2Q96G30 205 aa16.74■□□□□ 0.27
VSTM4-201ENST00000298454 JPT2Q9H910 190 aa16.74■□□□□ 0.27
VSTM4-201ENST00000298454 MGPP08493 103 aa16.73■□□□□ 0.27
VSTM4-201ENST00000298454 PAM16Q9Y3D7 125 aa16.72■□□□□ 0.27
VSTM4-201ENST00000298454 SYS1-DBNDD2H3BUS1 97 aa16.72■□□□□ 0.27
VSTM4-201ENST00000298454 HTN1P15515 57 aa16.72■□□□□ 0.27
VSTM4-201ENST00000298454 ATOH7Q8N100 152 aa16.72■□□□□ 0.27
VSTM4-201ENST00000298454 HSPB8Q9UJY1 196 aa16.72■□□□□ 0.27
VSTM4-201ENST00000298454 CBY3A6NI87 242 aa16.71■□□□□ 0.27
VSTM4-201ENST00000298454 OR11H12B2RN74 326 aa16.71■□□□□ 0.27
VSTM4-201ENST00000298454 VAMP8Q9BV40 100 aa16.71■□□□□ 0.27
VSTM4-201ENST00000298454 KIF25-AS1Q9Y6Z4 181 aa16.71■□□□□ 0.27
VSTM4-201ENST00000298454 IGLV1-51P01701 117 aa16.71■□□□□ 0.27
VSTM4-201ENST00000298454 NXT2Q9NPJ8 142 aaKnown RBP16.71■□□□□ 0.27
VSTM4-201ENST00000298454 IGLV2-18A0A075B6J9 118 aa16.7■□□□□ 0.26
VSTM4-201ENST00000298454 PRM2P04554 102 aa16.7■□□□□ 0.26
VSTM4-201ENST00000298454 ZNF747Q9BV97 191 aa16.7■□□□□ 0.26
VSTM4-201ENST00000298454 KIR2DL5BA0A0G2JN68 375 aa16.7■□□□□ 0.26
VSTM4-201ENST00000298454 KIR2DL5BA0A0G2JPC4 375 aa16.7■□□□□ 0.26
VSTM4-201ENST00000298454 DDTP30046 118 aa16.7■□□□□ 0.26
VSTM4-201ENST00000298454 LINC00315P59091 139 aa16.7■□□□□ 0.26
VSTM4-201ENST00000298454 KIR2DL5AQ8N109 375 aa16.7■□□□□ 0.26
VSTM4-201ENST00000298454 RASL10AQ92737 203 aa16.7■□□□□ 0.26
VSTM4-201ENST00000298454 MAP1LC3CQ9BXW4 147 aa16.7■□□□□ 0.26
VSTM4-201ENST00000298454 TRGV11A0A075B6L2 103 aa16.69■□□□□ 0.26
VSTM4-201ENST00000298454 A0A087WWL8 130 aa16.69■□□□□ 0.26
VSTM4-201ENST00000298454 LINC01546A6NGU7 62 aa16.69■□□□□ 0.26
VSTM4-201ENST00000298454 Q8N8P6 123 aa16.69■□□□□ 0.26
VSTM4-201ENST00000298454 C2CD3Q4AC94 2353 aa16.69■□□□□ 0.26
VSTM4-201ENST00000298454 PRSS47A8MTI9 375 aa16.68■□□□□ 0.26
VSTM4-201ENST00000298454 H0Y8G0 127 aa16.68■□□□□ 0.26
VSTM4-201ENST00000298454 HBDP02042 147 aa16.68■□□□□ 0.26
VSTM4-201ENST00000298454 STHQ8IWL8 128 aa16.68■□□□□ 0.26
VSTM4-201ENST00000298454 RPL39LQ96EH5 51 aaKnown RBP16.68■□□□□ 0.26
VSTM4-201ENST00000298454 MCRIP2Q9BUT9 160 aaKnown RBP16.68■□□□□ 0.26
VSTM4-201ENST00000298454 SMIM17P0DL12 118 aa16.68■□□□□ 0.26
VSTM4-201ENST00000298454 PF4P02776 101 aa16.67■□□□□ 0.26
VSTM4-201ENST00000298454 DEFB125Q8N687 156 aa16.67■□□□□ 0.26
VSTM4-201ENST00000298454 POM121L12Q8N7R1 296 aa16.67■□□□□ 0.26
VSTM4-201ENST00000298454 MAJINQ3KP22 176 aa16.66■□□□□ 0.26
VSTM4-201ENST00000298454 SYT8Q8NBV8 401 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms