RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 EPG5Q9HCE0 2579 aa12.57□□□□□ -0.4
DCLK2-201ENST00000296550 IGHV3-64A0A075B6Q5 118 aa12.57□□□□□ -0.4
DCLK2-201ENST00000296550 TRAV12-2A0A075B6T6 113 aa12.57□□□□□ -0.4
DCLK2-201ENST00000296550 C16orf54Q6UWD8 224 aa12.57□□□□□ -0.4
DCLK2-201ENST00000296550 DEFB1P60022 68 aa12.57□□□□□ -0.4
DCLK2-201ENST00000296550 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
DCLK2-201ENST00000296550 C11orf71Q6IPW1 123 aa12.57□□□□□ -0.4
DCLK2-201ENST00000296550 CCDC140Q96MF4 163 aa12.57□□□□□ -0.4
DCLK2-201ENST00000296550 H3BRM9 83 aa12.56□□□□□ -0.4
DCLK2-201ENST00000296550 DEFB131AP59861 70 aa12.56□□□□□ -0.4
DCLK2-201ENST00000296550 ZNF493Q6ZR52 646 aa12.56□□□□□ -0.4
DCLK2-201ENST00000296550 KLK9Q9UKQ9 250 aa12.56□□□□□ -0.4
DCLK2-201ENST00000296550 H3BUA1 57 aa12.56□□□□□ -0.4
DCLK2-201ENST00000296550 UBE2L6O14933 153 aa12.56□□□□□ -0.4
DCLK2-201ENST00000296550 RPL13AP40429 203 aaKnown RBP12.56□□□□□ -0.4
DCLK2-201ENST00000296550 EBI3Q14213 229 aa12.56□□□□□ -0.4
DCLK2-201ENST00000296550 NSUN5P1Q3KNT7 163 aa12.56□□□□□ -0.4
DCLK2-201ENST00000296550 TP53TG1Q9Y2A0 90 aa12.56□□□□□ -0.4
DCLK2-201ENST00000296550 VPS13AQ96RL7 3174 aa12.56□□□□□ -0.4
DCLK2-201ENST00000296550 COX6CP09669 75 aa12.55□□□□□ -0.4
DCLK2-201ENST00000296550 CD28P10747 220 aa12.55□□□□□ -0.4
DCLK2-201ENST00000296550 AJUBAQ96IF1 538 aa12.55□□□□□ -0.4
DCLK2-201ENST00000296550 AZU1P20160 251 aa12.55□□□□□ -0.4
DCLK2-201ENST00000296550 C9orf118A6NHY6 69 aa12.54□□□□□ -0.4
DCLK2-201ENST00000296550 F8VRH5 84 aa12.54□□□□□ -0.4
DCLK2-201ENST00000296550 UNQ9165/PRO28630Q6UXU0 137 aa12.54□□□□□ -0.4
DCLK2-201ENST00000296550 TRGV2A0A075B6R0 118 aa12.54□□□□□ -0.4
DCLK2-201ENST00000296550 G3V4G9 280 aa12.54□□□□□ -0.4
DCLK2-201ENST00000296550 SDHAF1A6NFY7 115 aa12.54□□□□□ -0.4
DCLK2-201ENST00000296550 C19orf54Q5BKX5 351 aa12.54□□□□□ -0.4
DCLK2-201ENST00000296550 PRORYQ9H606 182 aa12.54□□□□□ -0.4
DCLK2-201ENST00000296550 J3QLI3 93 aa12.54□□□□□ -0.4
DCLK2-201ENST00000296550 TRBV12-3P01733 135 aa12.54□□□□□ -0.4
DCLK2-201ENST00000296550 ZNF462Q96JM2 2506 aa12.53□□□□□ -0.4
DCLK2-201ENST00000296550 PKD1L2Q7Z442 2459 aa12.53□□□□□ -0.4
DCLK2-201ENST00000296550 C9orf47Q6ZRZ4 202 aa12.53□□□□□ -0.4
DCLK2-201ENST00000296550 WDFY4Q6ZS81 3184 aa12.53□□□□□ -0.4
DCLK2-201ENST00000296550 SVIPQ8NHG7 77 aa12.53□□□□□ -0.4
DCLK2-201ENST00000296550 TRAV2A0A0B4J234 112 aa12.52□□□□□ -0.4
DCLK2-201ENST00000296550 C20orf78Q9BR46 151 aa12.52□□□□□ -0.4
DCLK2-201ENST00000296550 CIRBPQ14011 172 aaKnown RBP12.52□□□□□ -0.41
DCLK2-201ENST00000296550 TCTEX1D4Q5JR98 221 aa12.52□□□□□ -0.41
DCLK2-201ENST00000296550 CKS1BP61024 79 aa12.52□□□□□ -0.41
DCLK2-201ENST00000296550 TTTY13Q9BZ97 58 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 SMAD5-AS1Q9Y6J3 95 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 MTORP42345 2549 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 IGHV1OR15-1A0A075B7D0 117 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 A0A087WX48 190 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 KNCNA6PVL3 124 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 K7EP34 96 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 IGLC6P0CF74 106 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 RPL39LQ96EH5 51 aaKnown RBP12.51□□□□□ -0.41
DCLK2-201ENST00000296550 PRRC2AP48634 2157 aaKnown RBP12.51□□□□□ -0.41
DCLK2-201ENST00000296550 IGKV3D-20A0A0C4DH25 116 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 UBE2E2Q96LR5 201 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 SIVA1O15304 175 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 MEIG1Q5JSS6 88 aa12.51□□□□□ -0.41
DCLK2-201ENST00000296550 HLA-DRB4P13762 266 aa12.5□□□□□ -0.41
DCLK2-201ENST00000296550 SPATA12Q7Z6I5 190 aa12.5□□□□□ -0.41
DCLK2-201ENST00000296550 HLA-DRB4X5D2U9 266 aa12.5□□□□□ -0.41
DCLK2-201ENST00000296550 Q8N6K4 173 aa12.5□□□□□ -0.41
DCLK2-201ENST00000296550 IGHG2P01859 326 aa12.5□□□□□ -0.41
DCLK2-201ENST00000296550 GAGE13Q4V321 117 aa12.5□□□□□ -0.41
DCLK2-201ENST00000296550 PRADC1Q9BSG0 188 aa12.5□□□□□ -0.41
DCLK2-201ENST00000296550 ZFAND3Q9H8U3 227 aa12.5□□□□□ -0.41
DCLK2-201ENST00000296550 FASNP49327 2511 aaKnown RBP12.5□□□□□ -0.41
DCLK2-201ENST00000296550 MRGPRG-AS1Q2M3A8 158 aa12.49□□□□□ -0.41
DCLK2-201ENST00000296550 ATP6V0BQ99437 205 aa12.49□□□□□ -0.41
DCLK2-201ENST00000296550 VPREB3Q9UKI3 123 aa12.49□□□□□ -0.41
DCLK2-201ENST00000296550 TSSC4Q9Y5U2 329 aaPredicted RBP12.49□□□□□ -0.41
DCLK2-201ENST00000296550 ZNF415Q09FC8 603 aa12.48□□□□□ -0.41
DCLK2-201ENST00000296550 Q71RC1 249 aaPredicted RBP12.48□□□□□ -0.41
DCLK2-201ENST00000296550 TRPT1Q86TN4 253 aaKnown RBP12.48□□□□□ -0.41
DCLK2-201ENST00000296550 PMVKQ15126 192 aa12.48□□□□□ -0.41
DCLK2-201ENST00000296550 PGPEP1Q9NXJ5 209 aa12.48□□□□□ -0.41
DCLK2-201ENST00000296550 K7ERJ3 54 aa12.48□□□□□ -0.41
DCLK2-201ENST00000296550 ELANEP08246 267 aa12.48□□□□□ -0.41
DCLK2-201ENST00000296550 PRSS29PA6NIE9 313 aa12.47□□□□□ -0.41
DCLK2-201ENST00000296550 RAI1Q7Z5J4 1906 aaPredicted RBP12.47□□□□□ -0.41
DCLK2-201ENST00000296550 TRBV25-1A0A075B6N4 114 aa12.47□□□□□ -0.41
DCLK2-201ENST00000296550 MYMXA0A1B0GTQ4 84 aa12.47□□□□□ -0.41
DCLK2-201ENST00000296550 TEX48A0A1B0GUV7 120 aa12.47□□□□□ -0.41
DCLK2-201ENST00000296550 CRXO43186 299 aaPredicted RBP12.47□□□□□ -0.41
DCLK2-201ENST00000296550 FN1P02751 2386 aaKnown RBP12.47□□□□□ -0.41
DCLK2-201ENST00000296550 DEFB136Q30KP8 78 aa12.46□□□□□ -0.41
DCLK2-201ENST00000296550 SRSF2Q01130 221 aaKnown RBP12.46□□□□□ -0.41
DCLK2-201ENST00000296550 LINC01619G3V211 115 aa12.46□□□□□ -0.42
DCLK2-201ENST00000296550 BOD1L2Q8IYS8 172 aa12.46□□□□□ -0.42
DCLK2-201ENST00000296550 URB1-AS1Q96HZ7 61 aa12.46□□□□□ -0.42
DCLK2-201ENST00000296550 TRGV1A0A0A0MS02 117 aa12.45□□□□□ -0.42
DCLK2-201ENST00000296550 J3QKU1 62 aa12.45□□□□□ -0.42
DCLK2-201ENST00000296550 DEFB113Q30KQ7 82 aa12.45□□□□□ -0.42
DCLK2-201ENST00000296550 XCL2Q9UBD3 114 aa12.45□□□□□ -0.42
DCLK2-201ENST00000296550 A0A1W2PPM0 123 aa12.45□□□□□ -0.42
DCLK2-201ENST00000296550 TMEM262E9PQX1 116 aa12.45□□□□□ -0.42
DCLK2-201ENST00000296550 RPL35AP18077 110 aaKnown RBP12.45□□□□□ -0.42
DCLK2-201ENST00000296550 ODF1Q14990 250 aa12.45□□□□□ -0.42
DCLK2-201ENST00000296550 PHLDA1Q8WV24 401 aaPredicted RBP12.45□□□□□ -0.42
DCLK2-201ENST00000296550 IGHV3-53P01767 116 aa12.45□□□□□ -0.42
DCLK2-201ENST00000296550 HOXD3P31249 432 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms