RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 C2orf91Q6ZV80 131 aa12.24□□□□□ -0.45
USP43-201ENST00000285199 OR11H6Q8NGC7 330 aa12.24□□□□□ -0.45
USP43-201ENST00000285199 DOPEY1Q5JWR5 2465 aa12.24□□□□□ -0.45
USP43-201ENST00000285199 TRBV7-9A0A0J9YWB2 115 aa12.23□□□□□ -0.45
USP43-201ENST00000285199 DUSP14O95147 198 aaKnown RBP12.23□□□□□ -0.45
USP43-201ENST00000285199 MAP1AP78559 2803 aaPredicted RBP12.23□□□□□ -0.45
USP43-201ENST00000285199 IGHV3-16A0A0C4DH30 117 aa12.23□□□□□ -0.45
USP43-201ENST00000285199 LY6DQ14210 128 aa12.23□□□□□ -0.45
USP43-201ENST00000285199 IGHV3-38A0A0C4DH36 116 aa12.22□□□□□ -0.45
USP43-201ENST00000285199 CTSGP08311 255 aa12.22□□□□□ -0.45
USP43-201ENST00000285199 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
USP43-201ENST00000285199 TRAV13-1A0A0B4J241 112 aa12.22□□□□□ -0.45
USP43-201ENST00000285199 A0A1W2PRX2 142 aa12.22□□□□□ -0.45
USP43-201ENST00000285199 SLC25A20O43772 301 aa12.22□□□□□ -0.45
USP43-201ENST00000285199 LINC01559Q495D7 138 aa12.22□□□□□ -0.45
USP43-201ENST00000285199 FRYQ5TBA9 3013 aa12.22□□□□□ -0.45
USP43-201ENST00000285199 C11orf68Q9H3H3 251 aaKnown RBP12.22□□□□□ -0.45
USP43-201ENST00000285199 PRO1854Q9UHT4 67 aa12.22□□□□□ -0.45
USP43-201ENST00000285199 SPRY4Q9C004 299 aa12.21□□□□□ -0.45
USP43-201ENST00000285199 FRYLO94915 3013 aa12.21□□□□□ -0.46
USP43-201ENST00000285199 JMJD1CQ15652 2540 aa12.21□□□□□ -0.46
USP43-201ENST00000285199 PMVKQ15126 192 aa12.21□□□□□ -0.46
USP43-201ENST00000285199 CR1LQ2VPA4 569 aa12.2□□□□□ -0.46
USP43-201ENST00000285199 MAPKAPK5-AS1Q8N8E1 139 aa12.2□□□□□ -0.46
USP43-201ENST00000285199 DSPP15924 2871 aaKnown RBP12.2□□□□□ -0.46
USP43-201ENST00000285199 MTORP42345 2549 aa12.2□□□□□ -0.46
USP43-201ENST00000285199 J3QQQ9 107 aa12.2□□□□□ -0.46
USP43-201ENST00000285199 TIMM21Q9BVV7 248 aa12.2□□□□□ -0.46
USP43-201ENST00000285199 CPAMD8Q8IZJ3 1885 aa12.2□□□□□ -0.46
USP43-201ENST00000285199 SYNJ2BPP57105 145 aa12.19□□□□□ -0.46
USP43-201ENST00000285199 TET2Q6N021 2002 aaPredicted RBP12.19□□□□□ -0.46
USP43-201ENST00000285199 ZFP2Q6ZN57 461 aa12.19□□□□□ -0.46
USP43-201ENST00000285199 INSL3P51460 131 aa12.19□□□□□ -0.46
USP43-201ENST00000285199 JPT2Q9H910 190 aa12.19□□□□□ -0.46
USP43-201ENST00000285199 ATXN8Q156A1 80 aa12.19□□□□□ -0.46
USP43-201ENST00000285199 CRYGCP07315 174 aa12.18□□□□□ -0.46
USP43-201ENST00000285199 MAPK1IP1LQ8NDC0 245 aa12.18□□□□□ -0.46
USP43-201ENST00000285199 ZFYVE26Q68DK2 2539 aa12.18□□□□□ -0.46
USP43-201ENST00000285199 CRYBA4P53673 196 aa12.17□□□□□ -0.46
USP43-201ENST00000285199 UBE2E2Q96LR5 201 aa12.17□□□□□ -0.46
USP43-201ENST00000285199 OPRPNQ99935 248 aaPredicted RBP12.17□□□□□ -0.46
USP43-201ENST00000285199 PIMREGQ9BSJ6 248 aa12.17□□□□□ -0.46
USP43-201ENST00000285199 TRBV7-1A0A0A6YYK4 115 aa12.17□□□□□ -0.46
USP43-201ENST00000285199 IGLV1-47P01700 117 aa12.17□□□□□ -0.46
USP43-201ENST00000285199 C1QTNF4Q9BXJ3 329 aa12.17□□□□□ -0.46
USP43-201ENST00000285199 MOB4Q9Y3A3 225 aa12.17□□□□□ -0.46
USP43-201ENST00000285199 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.16□□□□□ -0.46
USP43-201ENST00000285199 SHISA9B4DS77 424 aa12.16□□□□□ -0.46
USP43-201ENST00000285199 KAAG1Q9UBP8 84 aa12.16□□□□□ -0.46
USP43-201ENST00000285199 A4D1N5 150 aa12.16□□□□□ -0.46
USP43-201ENST00000285199 IGF1P05019 195 aa12.16□□□□□ -0.46
USP43-201ENST00000285199 M0R1W7 72 aa12.15□□□□□ -0.46
USP43-201ENST00000285199 MINOS1Q5TGZ0 78 aa12.15□□□□□ -0.46
USP43-201ENST00000285199 FAM110DQ8TAY7 271 aaPredicted RBP12.15□□□□□ -0.46
USP43-201ENST00000285199 FANCD2OSQ96PS1 177 aa12.15□□□□□ -0.46
USP43-201ENST00000285199 MINOS1-NBL1R4GNA1 71 aa12.15□□□□□ -0.46
USP43-201ENST00000285199 IGLV11-55A0A075B6I3 123 aa12.15□□□□□ -0.46
USP43-201ENST00000285199 IGHV7-81A0A0B4J1V7 117 aa12.15□□□□□ -0.46
USP43-201ENST00000285199 RBAKDNA6NC62 111 aa12.15□□□□□ -0.46
USP43-201ENST00000285199 BUB3O43684 328 aa12.15□□□□□ -0.46
USP43-201ENST00000285199 FOXI1Q12951 378 aa12.15□□□□□ -0.46
USP43-201ENST00000285199 DAND5Q8N907 189 aa12.15□□□□□ -0.47
USP43-201ENST00000285199 PLEKHB2Q96CS7 222 aa12.15□□□□□ -0.47
USP43-201ENST00000285199 TRGV2A0A075B6R0 118 aa12.14□□□□□ -0.47
USP43-201ENST00000285199 MT-ATP8P03928 68 aa12.14□□□□□ -0.47
USP43-201ENST00000285199 TRPT1Q86TN4 253 aaKnown RBP12.14□□□□□ -0.47
USP43-201ENST00000285199 SMIM20Q8N5G0 67 aa12.14□□□□□ -0.47
USP43-201ENST00000285199 C15orf53Q8NAA6 179 aa12.14□□□□□ -0.47
USP43-201ENST00000285199 MSRB2Q9Y3D2 182 aa12.14□□□□□ -0.47
USP43-201ENST00000285199 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
USP43-201ENST00000285199 MYCNOSP40205 109 aa12.14□□□□□ -0.47
USP43-201ENST00000285199 CCL19Q99731 98 aa12.14□□□□□ -0.47
USP43-201ENST00000285199 IGLV2-11P01706 119 aa12.13□□□□□ -0.47
USP43-201ENST00000285199 H3BMM0 161 aa12.13□□□□□ -0.47
USP43-201ENST00000285199 TAL2Q16559 108 aa12.13□□□□□ -0.47
USP43-201ENST00000285199 UBE2WQ96B02 151 aa12.13□□□□□ -0.47
USP43-201ENST00000285199 C11orf86A6NJI1 115 aa12.13□□□□□ -0.47
USP43-201ENST00000285199 LINC01548A6NM66 108 aa12.13□□□□□ -0.47
USP43-201ENST00000285199 LINC00158P58513 81 aa12.13□□□□□ -0.47
USP43-201ENST00000285199 Q6ZQT7 251 aa12.13□□□□□ -0.47
USP43-201ENST00000285199 PRIMA1Q86XR5 153 aa12.13□□□□□ -0.47
USP43-201ENST00000285199 NDUFA12Q9UI09 145 aa12.13□□□□□ -0.47
USP43-201ENST00000285199 MYO15AQ9UKN7 3530 aa12.12□□□□□ -0.47
USP43-201ENST00000285199 GATD1Q8NB37 220 aa12.12□□□□□ -0.47
USP43-201ENST00000285199 EDA2RQ9HAV5 297 aa12.12□□□□□ -0.47
USP43-201ENST00000285199 GAGE2AQ6NT46 116 aa12.12□□□□□ -0.47
USP43-201ENST00000285199 C10orf142B7Z368 130 aa12.12□□□□□ -0.47
USP43-201ENST00000285199 CLUHP3Q96NS8 147 aa12.12□□□□□ -0.47
USP43-201ENST00000285199 DAZ1Q9NQZ3 744 aaKnown RBP12.12□□□□□ -0.47
USP43-201ENST00000285199 MGAQ8IWI9 3026 aa12.11□□□□□ -0.47
USP43-201ENST00000285199 LGALS1P09382 135 aaKnown RBP12.11□□□□□ -0.47
USP43-201ENST00000285199 CFC1BP0CG36 223 aa12.11□□□□□ -0.47
USP43-201ENST00000285199 CFC1P0CG37 223 aa12.11□□□□□ -0.47
USP43-201ENST00000285199 ANKRD29Q8N6D5 301 aa12.11□□□□□ -0.47
USP43-201ENST00000285199 LY6G5BQ8NDX9 201 aa12.11□□□□□ -0.47
USP43-201ENST00000285199 DEFB131AP59861 70 aa12.11□□□□□ -0.47
USP43-201ENST00000285199 ZNF493Q6ZR52 646 aa12.11□□□□□ -0.47
USP43-201ENST00000285199 LRRK2Q5S007 2527 aa12.11□□□□□ -0.47
USP43-201ENST00000285199 LRP4O75096 1905 aa12.11□□□□□ -0.47
USP43-201ENST00000285199 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms