RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 IFI27P40305 119 aaPredicted RBP6.99□□□□□ -1.29
SSR3-201ENST00000265044 ZFAND2AQ8N6M9 145 aa6.99□□□□□ -1.29
SSR3-201ENST00000265044 NUDT3O95989 172 aa6.99□□□□□ -1.29
SSR3-201ENST00000265044 KRTAP1-1Q07627 177 aa6.99□□□□□ -1.29
SSR3-201ENST00000265044 BATFQ16520 125 aa6.99□□□□□ -1.29
SSR3-201ENST00000265044 TMEM191AQ9H0A3 160 aa6.99□□□□□ -1.29
SSR3-201ENST00000265044 DPH3P1Q9H4G8 78 aa6.99□□□□□ -1.29
SSR3-201ENST00000265044 CMC4P56277 68 aaPredicted RBP6.98□□□□□ -1.29
SSR3-201ENST00000265044 TCTAP57738 103 aa6.98□□□□□ -1.29
SSR3-201ENST00000265044 PRR9Q5T870 116 aa6.98□□□□□ -1.29
SSR3-201ENST00000265044 ZNF256Q9Y2P7 627 aaPredicted RBP6.98□□□□□ -1.29
SSR3-201ENST00000265044 MYOZ3Q8TDC0 251 aa6.98□□□□□ -1.29
SSR3-201ENST00000265044 MAP6D1Q9H9H5 199 aa6.98□□□□□ -1.29
SSR3-201ENST00000265044 C11orf21Q9P2W6 132 aa6.98□□□□□ -1.29
SSR3-201ENST00000265044 FOSL1P15407 271 aa6.98□□□□□ -1.29
SSR3-201ENST00000265044 DEFA6Q01524 100 aa6.98□□□□□ -1.29
SSR3-201ENST00000265044 A0A1B0GXF2 115 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 CRLF1O75462 422 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 PMCHL2Q9BQD1 86 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 TMEM160Q9NX00 188 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 TNFRSF6BO95407 300 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 GATA1P15976 413 aaPredicted RBP6.97□□□□□ -1.29
SSR3-201ENST00000265044 TMEM70Q9BUB7 260 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 GOLT1BQ9Y3E0 138 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 NPYP01303 97 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 JOSD1Q15040 202 aaPredicted RBP6.97□□□□□ -1.29
SSR3-201ENST00000265044 DMRTA1Q5VZB9 504 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 Q6ZN92 141 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 Q8N1Y9 231 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 KIR2DL4Q99706 377 aa6.97□□□□□ -1.29
SSR3-201ENST00000265044 TRGV2A0A075B6R0 118 aa6.96□□□□□ -1.29
SSR3-201ENST00000265044 SOCS3O14543 225 aa6.96□□□□□ -1.29
SSR3-201ENST00000265044 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.96□□□□□ -1.29
SSR3-201ENST00000265044 RNF152Q8N8N0 203 aa6.96□□□□□ -1.29
SSR3-201ENST00000265044 CHCHD1Q96BP2 118 aaKnown RBP6.96□□□□□ -1.29
SSR3-201ENST00000265044 HIVEP1P15822 2718 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 TRGV1A0A0A0MS02 117 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 CTRLP40313 264 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 ZNF415Q09FC8 603 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 COA6Q5JTJ3 125 aaKnown RBP6.96□□□□□ -1.3
SSR3-201ENST00000265044 C12orf54Q6X4T0 127 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 NDUFA11Q86Y39 141 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 OR2K2Q8NGT1 345 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 NXT2Q9NPJ8 142 aaKnown RBP6.96□□□□□ -1.3
SSR3-201ENST00000265044 GSN-AS1Q9NRJ2 163 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 TRAV25A0A0B4J276 109 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 H3BMM0 161 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 HLA-DRB4P13762 266 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 MDFICQ9P1T7 246 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 TP53TG3Q9ULZ0 132 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 HLA-DRB4X5D2U9 266 aa6.96□□□□□ -1.3
SSR3-201ENST00000265044 IGHV3-53P01767 116 aa6.95□□□□□ -1.3
SSR3-201ENST00000265044 IGLC6P0CF74 106 aa6.95□□□□□ -1.3
SSR3-201ENST00000265044 MCRIP2Q9BUT9 160 aaKnown RBP6.95□□□□□ -1.3
SSR3-201ENST00000265044 C16orf95Q9H693 158 aa6.95□□□□□ -1.3
SSR3-201ENST00000265044 TCAPO15273 167 aa6.95□□□□□ -1.3
SSR3-201ENST00000265044 NDUFA7O95182 113 aa6.95□□□□□ -1.3
SSR3-201ENST00000265044 PROK1P58294 105 aa6.95□□□□□ -1.3
SSR3-201ENST00000265044 ST20Q9HBF5 79 aa6.95□□□□□ -1.3
SSR3-201ENST00000265044 PPP1R17O96001 155 aa6.94□□□□□ -1.3
SSR3-201ENST00000265044 C3orf79P0CE67 100 aa6.94□□□□□ -1.3
SSR3-201ENST00000265044 C1QTNF4Q9BXJ3 329 aa6.94□□□□□ -1.3
SSR3-201ENST00000265044 SIGLEC8Q9NYZ4 499 aa6.94□□□□□ -1.3
SSR3-201ENST00000265044 TNFRSF18Q9Y5U5 241 aa6.94□□□□□ -1.3
SSR3-201ENST00000265044 IFITM10A6NMD0 228 aa6.94□□□□□ -1.3
SSR3-201ENST00000265044 HBDP02042 147 aa6.94□□□□□ -1.3
SSR3-201ENST00000265044 RIPPLY3P57055 190 aa6.94□□□□□ -1.3
SSR3-201ENST00000265044 TRBV7-9A0A0J9YWB2 115 aa6.94□□□□□ -1.3
SSR3-201ENST00000265044 JPT2Q9H910 190 aa6.94□□□□□ -1.3
SSR3-201ENST00000265044 H7C1H1 209 aa6.93□□□□□ -1.3
SSR3-201ENST00000265044 DGAT2L7PQ6IED9 249 aa6.93□□□□□ -1.3
SSR3-201ENST00000265044 Q6ZWC4 215 aa6.93□□□□□ -1.3
SSR3-201ENST00000265044 WFDC10AQ9H1F0 79 aa6.93□□□□□ -1.3
SSR3-201ENST00000265044 IGHV3-16A0A0C4DH30 117 aa6.93□□□□□ -1.3
SSR3-201ENST00000265044 PRM2P04554 102 aa6.93□□□□□ -1.3
SSR3-201ENST00000265044 PKIAP61925 76 aa6.93□□□□□ -1.3
SSR3-201ENST00000265044 C9orf66Q5T8R8 295 aa6.93□□□□□ -1.3
SSR3-201ENST00000265044 SPATA45Q537H7 98 aa6.92□□□□□ -1.3
SSR3-201ENST00000265044 OR4C5Q8NGB2 326 aa6.92□□□□□ -1.3
SSR3-201ENST00000265044 CSTL1Q9H114 145 aa6.92□□□□□ -1.3
SSR3-201ENST00000265044 MRPL16Q9NX20 251 aaKnown RBP6.92□□□□□ -1.3
SSR3-201ENST00000265044 IGHV1-24A0A0C4DH33 117 aa6.92□□□□□ -1.3
SSR3-201ENST00000265044 ADAMTSL5Q6ZMM2 481 aa6.92□□□□□ -1.3
SSR3-201ENST00000265044 NEGR1Q7Z3B1 354 aa6.92□□□□□ -1.3
SSR3-201ENST00000265044 DEFB125Q8N687 156 aa6.92□□□□□ -1.3
SSR3-201ENST00000265044 KLLNB2CW77 178 aa6.92□□□□□ -1.3
SSR3-201ENST00000265044 SUMO2P61956 95 aaKnown RBP6.92□□□□□ -1.3
SSR3-201ENST00000265044 CDPF1Q6NVV7 123 aa6.92□□□□□ -1.3
SSR3-201ENST00000265044 TMEM158Q8WZ71 300 aa6.92□□□□□ -1.3
SSR3-201ENST00000265044 SCGB3A1Q96QR1 104 aa6.92□□□□□ -1.3
SSR3-201ENST00000265044 NBPF19A0A087WUL8 3843 aa6.91□□□□□ -1.3
SSR3-201ENST00000265044 LAGE3Q14657 143 aa6.91□□□□□ -1.3
SSR3-201ENST00000265044 IFI27L1Q96BM0 104 aa6.91□□□□□ -1.3
SSR3-201ENST00000265044 MRAP2Q96G30 205 aa6.91□□□□□ -1.3
SSR3-201ENST00000265044 COL6A5A8TX70 2615 aa6.91□□□□□ -1.3
SSR3-201ENST00000265044 DEFB130BP0DP73 79 aa6.91□□□□□ -1.3
SSR3-201ENST00000265044 DEFB130AP0DP74 79 aa6.91□□□□□ -1.3
SSR3-201ENST00000265044 ODF3L2Q3SX64 289 aa6.91□□□□□ -1.3
SSR3-201ENST00000265044 ZNF493Q6ZR52 646 aa6.91□□□□□ -1.3
SSR3-201ENST00000265044 LAMTOR2Q9Y2Q5 125 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms