RNA–Protein interactions for RNA: ENST00000259239.7

IMP4-201, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IMP4, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-201ENST00000259239 TWIST1Q15672 202 aa12.93□□□□□ -0.34
IMP4-201ENST00000259239 FRZBQ92765 325 aa12.93□□□□□ -0.34
IMP4-201ENST00000259239 LINC00467Q9BRT7 94 aa12.93□□□□□ -0.34
IMP4-201ENST00000259239 SCRT2Q9NQ03 307 aa12.93□□□□□ -0.34
IMP4-201ENST00000259239 GOLT1BQ9Y3E0 138 aa12.93□□□□□ -0.34
IMP4-201ENST00000259239 PHLDA3Q9Y5J5 127 aa12.93□□□□□ -0.34
IMP4-201ENST00000259239 NBEAL2Q6ZNJ1 2754 aa12.93□□□□□ -0.34
IMP4-201ENST00000259239 FABP9Q0Z7S8 132 aa12.93□□□□□ -0.34
IMP4-201ENST00000259239 COX19Q49B96 90 aa12.93□□□□□ -0.34
IMP4-201ENST00000259239 SPANXN1Q5VSR9 72 aa12.93□□□□□ -0.34
IMP4-201ENST00000259239 A0A1B0GW15 77 aa12.92□□□□□ -0.34
IMP4-201ENST00000259239 M0R381 172 aa12.92□□□□□ -0.34
IMP4-201ENST00000259239 C9orf85Q96MD7 179 aa12.92□□□□□ -0.34
IMP4-201ENST00000259239 MRPL18Q9H0U6 180 aaKnown RBP12.92□□□□□ -0.34
IMP4-201ENST00000259239 HLA-DQA1P01909 254 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 MT-ND6P03923 174 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 CACNG7P62955 275 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 KIR2DL5BA0A0G2JN68 375 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 KIR2DL5BA0A0G2JPC4 375 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 C1orf196B1AJZ1 125 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 PHOX2AO14813 284 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 S100A8P05109 93 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 AZU1P20160 251 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 APOC4P55056 127 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 SLAQ13239 276 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 KIR2DL5AQ8N109 375 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 ZFP82Q8N141 532 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 KIR2DL5BQ8NHK3 375 aa12.91□□□□□ -0.34
IMP4-201ENST00000259239 IGHV4-4A0A075B6R2 117 aa12.9□□□□□ -0.34
IMP4-201ENST00000259239 ZNF705AQ6ZN79 300 aaPredicted RBP12.9□□□□□ -0.34
IMP4-201ENST00000259239 ZNF415Q09FC8 603 aa12.89□□□□□ -0.35
IMP4-201ENST00000259239 GATD1Q8NB37 220 aa12.89□□□□□ -0.35
IMP4-201ENST00000259239 C11orf72Q8NBR9 251 aa12.89□□□□□ -0.35
IMP4-201ENST00000259239 GSN-AS1Q9NRJ2 163 aa12.89□□□□□ -0.35
IMP4-201ENST00000259239 NXPH4O95158 308 aa12.88□□□□□ -0.35
IMP4-201ENST00000259239 DMRTA1Q5VZB9 504 aa12.88□□□□□ -0.35
IMP4-201ENST00000259239 ZNF493Q6ZR52 646 aa12.88□□□□□ -0.35
IMP4-201ENST00000259239 APCSP02743 223 aa12.88□□□□□ -0.35
IMP4-201ENST00000259239 DEFB135Q30KP9 77 aa12.88□□□□□ -0.35
IMP4-201ENST00000259239 KIAA1644Q3SXP7 199 aa12.88□□□□□ -0.35
IMP4-201ENST00000259239 PRB2P02812 416 aaPredicted RBP12.87□□□□□ -0.35
IMP4-201ENST00000259239 RAB5BP61020 215 aa12.87□□□□□ -0.35
IMP4-201ENST00000259239 RNASE8Q8TDE3 154 aaKnown RBP12.87□□□□□ -0.35
IMP4-201ENST00000259239 TRGC1P0CF51 173 aa12.86□□□□□ -0.35
IMP4-201ENST00000259239 EVI2AP22794 236 aa12.86□□□□□ -0.35
IMP4-201ENST00000259239 TMEM263Q8WUH6 116 aaKnown RBP12.86□□□□□ -0.35
IMP4-201ENST00000259239 RCHY1Q96PM5 261 aa12.86□□□□□ -0.35
IMP4-201ENST00000259239 TMEM191AQ9H0A3 160 aa12.86□□□□□ -0.35
IMP4-201ENST00000259239 A8MZ25 164 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 AMN1Q8IY45 258 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 NACAE9PAV3 2078 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 DNHD1Q96M86 4753 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 HIST1H2BKO60814 126 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 HIST1H2BJP06899 126 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 HIST1H2BOP23527 126 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 HIST1H2BBP33778 126 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 HIST1H2BDP58876 126 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 HIST1H2BCP62807 126 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 HIST2H2BEQ16778 126 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 RRN3P1Q2M238 152 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.85□□□□□ -0.35
IMP4-201ENST00000259239 KPRPQ5T749 579 aaPredicted RBP12.85□□□□□ -0.35
IMP4-201ENST00000259239 SYT8Q8NBV8 401 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 HIST1H2BHQ93079 126 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 HIST1H2BNQ99877 126 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 HIST1H2BMQ99879 126 aa12.85□□□□□ -0.35
IMP4-201ENST00000259239 KRTAP21-3Q3LHN1 58 aa12.84□□□□□ -0.35
IMP4-201ENST00000259239 ZNF876PQ49A33 203 aa12.84□□□□□ -0.35
IMP4-201ENST00000259239 FAM104BQ5XKR9 115 aa12.84□□□□□ -0.35
IMP4-201ENST00000259239 SMIM15Q7Z3B0 74 aa12.84□□□□□ -0.35
IMP4-201ENST00000259239 IL17DQ8TAD2 202 aa12.84□□□□□ -0.35
IMP4-201ENST00000259239 C16orf74Q96GX8 76 aa12.84□□□□□ -0.35
IMP4-201ENST00000259239 AP1S3Q96PC3 154 aa12.84□□□□□ -0.35
IMP4-201ENST00000259239 JPT2Q9H910 190 aa12.84□□□□□ -0.35
IMP4-201ENST00000259239 UBE2CO00762 179 aa12.83□□□□□ -0.36
IMP4-201ENST00000259239 C14orf178Q8N769 122 aaPredicted RBP12.83□□□□□ -0.36
IMP4-201ENST00000259239 X6R8D5 127 aa12.83□□□□□ -0.36
IMP4-201ENST00000259239 M0R2P5 195 aa12.82□□□□□ -0.36
IMP4-201ENST00000259239 RNF185Q96GF1 192 aa12.82□□□□□ -0.36
IMP4-201ENST00000259239 SPXQ9BT56 116 aa12.82□□□□□ -0.36
IMP4-201ENST00000259239 PLAC8L1A1L4L8 177 aa12.82□□□□□ -0.36
IMP4-201ENST00000259239 SRIP30626 198 aa12.82□□□□□ -0.36
IMP4-201ENST00000259239 MRPL16Q9NX20 251 aaKnown RBP12.82□□□□□ -0.36
IMP4-201ENST00000259239 RAB4AP20338 218 aa12.81□□□□□ -0.36
IMP4-201ENST00000259239 MRPL51Q4U2R6 128 aaKnown RBP12.81□□□□□ -0.36
IMP4-201ENST00000259239 A0A087WWL8 130 aa12.8□□□□□ -0.36
IMP4-201ENST00000259239 Q6ZWC4 215 aa12.8□□□□□ -0.36
IMP4-201ENST00000259239 DPH3P1Q9H4G8 78 aa12.8□□□□□ -0.36
IMP4-201ENST00000259239 K7EIL1 84 aa12.79□□□□□ -0.36
IMP4-201ENST00000259239 OR11H2Q8NH07 326 aa12.79□□□□□ -0.36
IMP4-201ENST00000259239 RNF183Q96D59 192 aa12.79□□□□□ -0.36
IMP4-201ENST00000259239 NOP10Q9NPE3 64 aaKnown RBP12.79□□□□□ -0.36
IMP4-201ENST00000259239 D6R8Y8 96 aa12.79□□□□□ -0.36
IMP4-201ENST00000259239 SMKR1H3BMG3 65 aa12.79□□□□□ -0.36
IMP4-201ENST00000259239 MGPP08493 103 aa12.79□□□□□ -0.36
IMP4-201ENST00000259239 FAM74A4Q5TZK3 123 aa12.79□□□□□ -0.36
IMP4-201ENST00000259239 PTH2Q96A98 100 aa12.79□□□□□ -0.36
IMP4-201ENST00000259239 ALKBH7Q9BT30 221 aaPredicted RBP12.79□□□□□ -0.36
IMP4-201ENST00000259239 SAMD10Q9BYL1 202 aa12.79□□□□□ -0.36
IMP4-201ENST00000259239 KIF25-AS1Q9Y6Z4 181 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms