RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 PTH2Q96A98 100 aa12.41□□□□□ -0.42
SNRPA1-201ENST00000254193 MUC4Q99102 2169 aa12.41□□□□□ -0.42
SNRPA1-201ENST00000254193 MLST8Q9BVC4 326 aa12.41□□□□□ -0.42
SNRPA1-201ENST00000254193 EPPK1P58107 5090 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-201ENST00000254193 H3BVH4 76 aa12.4□□□□□ -0.42
SNRPA1-201ENST00000254193 RS1O15537 224 aa12.4□□□□□ -0.42
SNRPA1-201ENST00000254193 GYPEP15421 78 aa12.4□□□□□ -0.42
SNRPA1-201ENST00000254193 MEF2BQ02080 365 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-201ENST00000254193 MRPL23Q16540 153 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-201ENST00000254193 LINC01559Q495D7 138 aa12.4□□□□□ -0.42
SNRPA1-201ENST00000254193 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
SNRPA1-201ENST00000254193 IL36BQ9NZH7 164 aa12.4□□□□□ -0.42
SNRPA1-201ENST00000254193 IGHV3-73A0A0B4J1V6 119 aa12.39□□□□□ -0.43
SNRPA1-201ENST00000254193 IFNA1P01562 189 aa12.39□□□□□ -0.43
SNRPA1-201ENST00000254193 ARMS2P0C7Q2 107 aa12.39□□□□□ -0.43
SNRPA1-201ENST00000254193 BCL2P10415 239 aa12.39□□□□□ -0.43
SNRPA1-201ENST00000254193 GATA1P15976 413 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-201ENST00000254193 Q9H8V8 135 aa12.39□□□□□ -0.43
SNRPA1-201ENST00000254193 MRPS16Q9Y3D3 137 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-201ENST00000254193 NBDYA0A0U1RRE5 68 aa12.38□□□□□ -0.43
SNRPA1-201ENST00000254193 K7EQD1 137 aa12.38□□□□□ -0.43
SNRPA1-201ENST00000254193 DNLZQ5SXM8 178 aa12.38□□□□□ -0.43
SNRPA1-201ENST00000254193 PRR27Q6MZM9 219 aa12.38□□□□□ -0.43
SNRPA1-201ENST00000254193 PCNPQ8WW12 178 aaKnown RBP12.38□□□□□ -0.43
SNRPA1-201ENST00000254193 LOC100131303A0A0U1RQF7 123 aa12.37□□□□□ -0.43
SNRPA1-201ENST00000254193 RAB19A4D1S5 217 aa12.37□□□□□ -0.43
SNRPA1-201ENST00000254193 RTL8CO15255 209 aa12.37□□□□□ -0.43
SNRPA1-201ENST00000254193 PDE6DO43924 150 aa12.37□□□□□ -0.43
SNRPA1-201ENST00000254193 RPL19P84098 196 aaKnown RBP12.37□□□□□ -0.43
SNRPA1-201ENST00000254193 CENPWQ5EE01 88 aa12.37□□□□□ -0.43
SNRPA1-201ENST00000254193 DMRTA1Q5VZB9 504 aa12.37□□□□□ -0.43
SNRPA1-201ENST00000254193 NEGR1Q7Z3B1 354 aa12.37□□□□□ -0.43
SNRPA1-201ENST00000254193 UPK3BQ9BT76 320 aa12.37□□□□□ -0.43
SNRPA1-201ENST00000254193 VAX2Q9UIW0 290 aa12.37□□□□□ -0.43
SNRPA1-201ENST00000254193 SRIP30626 198 aa12.36□□□□□ -0.43
SNRPA1-201ENST00000254193 BLOC1S1P78537 153 aa12.36□□□□□ -0.43
SNRPA1-201ENST00000254193 LYPD5Q6UWN5 251 aa12.36□□□□□ -0.43
SNRPA1-201ENST00000254193 SLC25A29Q8N8R3 303 aa12.36□□□□□ -0.43
SNRPA1-201ENST00000254193 JPT2Q9H910 190 aa12.36□□□□□ -0.43
SNRPA1-201ENST00000254193 MED9Q9NWA0 146 aa12.36□□□□□ -0.43
SNRPA1-201ENST00000254193 C1orf134Q5TEV5 83 aa12.35□□□□□ -0.43
SNRPA1-201ENST00000254193 PARLQ9H300 379 aa12.35□□□□□ -0.43
SNRPA1-201ENST00000254193 SCRT2Q9NQ03 307 aa12.35□□□□□ -0.43
SNRPA1-201ENST00000254193 PHLDA3Q9Y5J5 127 aa12.35□□□□□ -0.43
SNRPA1-201ENST00000254193 DNAH6Q9C0G6 4158 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 A8MWV9 139 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 CIDEAO60543 219 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 NXPH4O95158 308 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 IGLV2-8P01709 118 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 GNG4P50150 75 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 PIK3CD-AS1Q5SR53 167 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 Q6ZSN1 163 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 LINC00336Q6ZUF6 198 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 SYT8Q8NBV8 401 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 SAMD10Q9BYL1 202 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 NACAE9PAV3 2078 aa12.34□□□□□ -0.43
SNRPA1-201ENST00000254193 TRBV6-4A0A1B0GX49 114 aa12.33□□□□□ -0.44
SNRPA1-201ENST00000254193 M0R381 172 aa12.33□□□□□ -0.44
SNRPA1-201ENST00000254193 MGST1P10620 155 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-201ENST00000254193 TAGLN2P37802 199 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-201ENST00000254193 KRTAP1-5Q9BYS1 174 aa12.33□□□□□ -0.44
SNRPA1-201ENST00000254193 DNAH10Q8IVF4 4471 aa12.33□□□□□ -0.44
SNRPA1-201ENST00000254193 TRBV20OR9-2A0A075B6H5 130 aa12.32□□□□□ -0.44
SNRPA1-201ENST00000254193 ZFP2Q6ZN57 461 aa12.32□□□□□ -0.44
SNRPA1-201ENST00000254193 PRADC1Q9BSG0 188 aa12.32□□□□□ -0.44
SNRPA1-201ENST00000254193 PRSS29PA6NIE9 313 aa12.31□□□□□ -0.44
SNRPA1-201ENST00000254193 RHOHQ15669 191 aa12.31□□□□□ -0.44
SNRPA1-201ENST00000254193 SOHLH1Q5JUK2 328 aa12.31□□□□□ -0.44
SNRPA1-201ENST00000254193 UFSP1Q6NVU6 142 aa12.31□□□□□ -0.44
SNRPA1-201ENST00000254193 ZFP82Q8N141 532 aa12.31□□□□□ -0.44
SNRPA1-201ENST00000254193 LYPD6BQ8NI32 183 aa12.31□□□□□ -0.44
SNRPA1-201ENST00000254193 RBFOX3A6NFN3 312 aa12.3□□□□□ -0.44
SNRPA1-201ENST00000254193 SIVA1O15304 175 aa12.3□□□□□ -0.44
SNRPA1-201ENST00000254193 C6orf223Q8N319 242 aa12.3□□□□□ -0.44
SNRPA1-201ENST00000254193 BIRC6Q9NR09 4857 aa12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 A0A087WWL8 130 aa12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 MUC21A0A0G2JKD1 596 aa12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 MUC21A0A140T8X8 626 aa12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 CXCL1P09341 107 aa12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 MED14OSP0DP75 135 aa12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 TTC32Q5I0X7 151 aa12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 FAM74A4Q5TZK3 123 aa12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 SH2D6Q7Z4S9 175 aa12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 OR10AG1Q8NH19 301 aa12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 DAZAP1Q96EP5 407 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 SFRP2Q96HF1 295 aa12.29□□□□□ -0.44
SNRPA1-201ENST00000254193 C19orf71A6NCJ1 209 aa12.28□□□□□ -0.44
SNRPA1-201ENST00000254193 C14orf178Q8N769 122 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-201ENST00000254193 SMIM12Q96EX1 92 aa12.28□□□□□ -0.44
SNRPA1-201ENST00000254193 SSBP4Q9BWG4 385 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-201ENST00000254193 Q9UF83 564 aa12.28□□□□□ -0.44
SNRPA1-201ENST00000254193 A0A1W2PPQ1 181 aa12.27□□□□□ -0.45
SNRPA1-201ENST00000254193 RHODO00212 210 aa12.27□□□□□ -0.45
SNRPA1-201ENST00000254193 CRYGDP07320 174 aa12.27□□□□□ -0.45
SNRPA1-201ENST00000254193 GZMBP10144 247 aa12.27□□□□□ -0.45
SNRPA1-201ENST00000254193 SSTP61278 116 aa12.27□□□□□ -0.45
SNRPA1-201ENST00000254193 OR2D3Q8NGH3 330 aa12.27□□□□□ -0.45
SNRPA1-201ENST00000254193 A0A1B0GVY2 172 aa12.26□□□□□ -0.45
SNRPA1-201ENST00000254193 GAGE12JA6NER3 117 aa12.26□□□□□ -0.45
SNRPA1-201ENST00000254193 SNAI2O43623 268 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms