RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 IFNA5P01569 189 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 RAB4AP20338 218 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 GCSHP23434 173 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 PQLC2Q6ZP29 291 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 GOLT1AQ6ZVE7 132 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 OR4C5Q8NGB2 326 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 FRZBQ92765 325 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 MARVELD1Q9BSK0 173 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 TMEM70Q9BUB7 260 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 WFDC1Q9HC57 220 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 NAGKQ9UJ70 344 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 PGPA6NDG6 321 aa6.89□□□□□ -1.31
VPS50-201ENST00000251739 PCP4L1A6NKN8 68 aa6.89□□□□□ -1.31
VPS50-201ENST00000251739 IBA57-AS1B1ANH7 110 aa6.89□□□□□ -1.31
VPS50-201ENST00000251739 F6UZH7 168 aa6.89□□□□□ -1.31
VPS50-201ENST00000251739 S100A9P06702 114 aaKnown RBP6.89□□□□□ -1.31
VPS50-201ENST00000251739 RPL12P30050 165 aaKnown RBP6.89□□□□□ -1.31
VPS50-201ENST00000251739 DPPA3Q6W0C5 159 aa6.89□□□□□ -1.31
VPS50-201ENST00000251739 NTN5Q8WTR8 489 aaPredicted RBP6.89□□□□□ -1.31
VPS50-201ENST00000251739 HYLS1Q96M11 299 aa6.89□□□□□ -1.31
VPS50-201ENST00000251739 C11orf21Q9P2W6 132 aa6.89□□□□□ -1.31
VPS50-201ENST00000251739 FBLL1A6NHQ2 334 aaKnown RBP6.88□□□□□ -1.31
VPS50-201ENST00000251739 F8W036 122 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 RS1O15537 224 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 PET100P0DJ07 73 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 RAB2AP61019 212 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 GNG5P63218 68 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 LCE4AQ5TA78 99 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 CFAP126Q5VTH2 177 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 NHLRC2Q8NBF2 726 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 CMTM2Q8TAZ6 248 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 KCNS1Q96KK3 526 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 C9orf85Q96MD7 179 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 TCEAL7Q9BRU2 100 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 SMIM3Q9BZL3 60 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 SDF2L1Q9HCN8 221 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 TREM1Q9NP99 234 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 RPH3ALQ9UNE2 315 aa6.88□□□□□ -1.31
VPS50-201ENST00000251739 TRBV6-4A0A1B0GX49 114 aa6.87□□□□□ -1.31
VPS50-201ENST00000251739 LINC00862A6NCI5 91 aa6.87□□□□□ -1.31
VPS50-201ENST00000251739 IGLV2-11P01706 119 aa6.87□□□□□ -1.31
VPS50-201ENST00000251739 SMR3BP02814 79 aaPredicted RBP6.87□□□□□ -1.31
VPS50-201ENST00000251739 LINC00694P0DN24 101 aa6.87□□□□□ -1.31
VPS50-201ENST00000251739 ZNF80P51504 273 aaPredicted RBP6.87□□□□□ -1.31
VPS50-201ENST00000251739 HAMPP81172 84 aa6.87□□□□□ -1.31
VPS50-201ENST00000251739 LAGE3Q14657 143 aa6.87□□□□□ -1.31
VPS50-201ENST00000251739 ACOT6Q3I5F7 207 aaPredicted RBP6.87□□□□□ -1.31
VPS50-201ENST00000251739 LBHQ53QV2 105 aaPredicted RBP6.87□□□□□ -1.31
VPS50-201ENST00000251739 FAM74A1Q5RGS3 127 aa6.87□□□□□ -1.31
VPS50-201ENST00000251739 SCGB1C1Q8TD33 95 aa6.87□□□□□ -1.31
VPS50-201ENST00000251739 ASB13Q8WXK3 278 aa6.87□□□□□ -1.31
VPS50-201ENST00000251739 PTH2Q96A98 100 aa6.87□□□□□ -1.31
VPS50-201ENST00000251739 IGLV5-52A0A0A0MRZ9 124 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 SERTM2A0A1B0GWG4 89 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 CIDEAO60543 219 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 TCRAP04437 139 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 S100A8P05109 93 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 PFN1P07737 140 aaKnown RBP6.86□□□□□ -1.31
VPS50-201ENST00000251739 STAG3L2P0CL84 134 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 STAG3L3P0CL85 134 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 ARL14EPLP0DKL9 152 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 S100PP25815 95 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 PPT1P50897 306 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 RHOHQ15669 191 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 ZNF876PQ49A33 203 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 LELP1Q5T871 98 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 Q6ZSA8 131 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 Q8N814 137 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 C5orf17Q8NAS9 161 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 OR2G3Q8NGZ4 309 aa6.86□□□□□ -1.31
VPS50-201ENST00000251739 GGTLC3B5MD39 225 aa6.85□□□□□ -1.31
VPS50-201ENST00000251739 KRBOX1C9JBD0 128 aa6.85□□□□□ -1.31
VPS50-201ENST00000251739 SSNA1O43805 119 aa6.85□□□□□ -1.31
VPS50-201ENST00000251739 C1QBP02746 253 aa6.85□□□□□ -1.31
VPS50-201ENST00000251739 RNASE3P12724 160 aaKnown RBP6.85□□□□□ -1.31
VPS50-201ENST00000251739 COTL1Q14019 142 aa6.85□□□□□ -1.31
VPS50-201ENST00000251739 WFDC2Q14508 124 aa6.85□□□□□ -1.31
VPS50-201ENST00000251739 ZNF506Q5JVG8 444 aa6.85□□□□□ -1.31
VPS50-201ENST00000251739 Q6ZSN1 163 aa6.85□□□□□ -1.31
VPS50-201ENST00000251739 OR10G9Q8NGN4 311 aa6.85□□□□□ -1.31
VPS50-201ENST00000251739 OR10G7Q8NGN6 311 aa6.85□□□□□ -1.31
VPS50-201ENST00000251739 FAM30AQ9NZY2 134 aa6.85□□□□□ -1.31
VPS50-201ENST00000251739 TRAV8-6A0A0B4J262 113 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 A0A1W2PPV4 95 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 PGPEP1LA6NFU8 196 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 HMGB3O15347 200 aaKnown RBP6.84□□□□□ -1.31
VPS50-201ENST00000251739 PSCAO43653 123 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 GCGP01275 180 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 CDC34P49427 236 aaPredicted RBP6.84□□□□□ -1.31
VPS50-201ENST00000251739 OR10J3Q5JRS4 329 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 TMEM75Q8N9X5 138 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 SGK494Q96LW2 274 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 PRADC1Q9BSG0 188 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 NDFIP1Q9BT67 221 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 GTSF1LQ9H1H1 148 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 Q9HAA7 133 aa6.84□□□□□ -1.31
VPS50-201ENST00000251739 LRP1Q07954 4544 aaKnown RBP6.84□□□□□ -1.32
VPS50-201ENST00000251739 TAAR5O14804 337 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 IFNA7P01567 189 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms