RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 CLPSL1A2RUU4 121 aa12.88□□□□□ -0.35
SGPP1-201ENST00000247225 RPL39P62891 51 aaKnown RBP12.88□□□□□ -0.35
SGPP1-201ENST00000247225 SLC50A1Q9BRV3 221 aa12.88□□□□□ -0.35
SGPP1-201ENST00000247225 DUSP14O95147 198 aaKnown RBP12.87□□□□□ -0.35
SGPP1-201ENST00000247225 BEX4Q9NWD9 120 aaPredicted RBP12.87□□□□□ -0.35
SGPP1-201ENST00000247225 ZFYVE26Q68DK2 2539 aa12.87□□□□□ -0.35
SGPP1-201ENST00000247225 MYMXA0A1B0GTQ4 84 aa12.87□□□□□ -0.35
SGPP1-201ENST00000247225 F8VRH5 84 aa12.87□□□□□ -0.35
SGPP1-201ENST00000247225 ODF3BA8MYP8 253 aa12.86□□□□□ -0.35
SGPP1-201ENST00000247225 M0R1W7 72 aa12.86□□□□□ -0.35
SGPP1-201ENST00000247225 ASIPP42127 132 aa12.86□□□□□ -0.35
SGPP1-201ENST00000247225 RAX2Q96IS3 184 aa12.86□□□□□ -0.35
SGPP1-201ENST00000247225 A0A1W2PPR1 153 aa12.85□□□□□ -0.35
SGPP1-201ENST00000247225 EDN2P20800 178 aa12.85□□□□□ -0.35
SGPP1-201ENST00000247225 OPRPNQ99935 248 aaPredicted RBP12.85□□□□□ -0.35
SGPP1-201ENST00000247225 FAM110DQ8TAY7 271 aaPredicted RBP12.85□□□□□ -0.35
SGPP1-201ENST00000247225 SPANXB1Q9NS25 103 aaPredicted RBP12.85□□□□□ -0.35
SGPP1-201ENST00000247225 SMPXQ9UHP9 88 aa12.85□□□□□ -0.35
SGPP1-201ENST00000247225 IGLV2-18A0A075B6J9 118 aa12.85□□□□□ -0.35
SGPP1-201ENST00000247225 E9PLD3 99 aa12.85□□□□□ -0.35
SGPP1-201ENST00000247225 PHLDA1Q8WV24 401 aaPredicted RBP12.85□□□□□ -0.35
SGPP1-201ENST00000247225 CRYBG3Q68DQ2 2970 aa12.84□□□□□ -0.35
SGPP1-201ENST00000247225 RRN3P1Q2M238 152 aa12.84□□□□□ -0.35
SGPP1-201ENST00000247225 CCDC168Q8NDH2 2452 aa12.84□□□□□ -0.35
SGPP1-201ENST00000247225 RASL10AQ92737 203 aa12.84□□□□□ -0.35
SGPP1-201ENST00000247225 TRAV12-2A0A075B6T6 113 aa12.84□□□□□ -0.35
SGPP1-201ENST00000247225 TRAV12-3A0A0B4J271 114 aa12.84□□□□□ -0.35
SGPP1-201ENST00000247225 PLNP26678 52 aa12.84□□□□□ -0.35
SGPP1-201ENST00000247225 TCF15Q12870 199 aa12.84□□□□□ -0.35
SGPP1-201ENST00000247225 NDUFS8O00217 210 aa12.83□□□□□ -0.36
SGPP1-201ENST00000247225 LGALS1P09382 135 aaKnown RBP12.83□□□□□ -0.36
SGPP1-201ENST00000247225 SYT8Q8NBV8 401 aa12.83□□□□□ -0.36
SGPP1-201ENST00000247225 TM2D2Q9BX73 214 aa12.83□□□□□ -0.36
SGPP1-201ENST00000247225 ZMAT4Q9H898 229 aa12.83□□□□□ -0.36
SGPP1-201ENST00000247225 HIGD1BQ9P298 99 aa12.83□□□□□ -0.36
SGPP1-201ENST00000247225 TP53TG1Q9Y2A0 90 aa12.83□□□□□ -0.36
SGPP1-201ENST00000247225 IGHV3-73A0A0B4J1V6 119 aa12.82□□□□□ -0.36
SGPP1-201ENST00000247225 TRAV41A0A0B4J266 112 aa12.82□□□□□ -0.36
SGPP1-201ENST00000247225 CD7P09564 240 aa12.82□□□□□ -0.36
SGPP1-201ENST00000247225 ADARB2-AS1A8MUL3 147 aa12.82□□□□□ -0.36
SGPP1-201ENST00000247225 BAALCQ8WXS3 180 aa12.82□□□□□ -0.36
SGPP1-201ENST00000247225 ADORA2A-AS1P86434 159 aa12.81□□□□□ -0.36
SGPP1-201ENST00000247225 Q1RN00 199 aa12.81□□□□□ -0.36
SGPP1-201ENST00000247225 SPOCK3Q9BQ16 436 aa12.81□□□□□ -0.36
SGPP1-201ENST00000247225 NPC2P61916 151 aa12.81□□□□□ -0.36
SGPP1-201ENST00000247225 LY6DQ14210 128 aa12.81□□□□□ -0.36
SGPP1-201ENST00000247225 TRAV21A0A0B4J279 112 aa12.8□□□□□ -0.36
SGPP1-201ENST00000247225 F8W1H4 67 aa12.8□□□□□ -0.36
SGPP1-201ENST00000247225 ORMDL2Q53FV1 153 aa12.8□□□□□ -0.36
SGPP1-201ENST00000247225 IGF2-ASQ6U949 168 aa12.8□□□□□ -0.36
SGPP1-201ENST00000247225 DUX5Q96PT3 197 aa12.8□□□□□ -0.36
SGPP1-201ENST00000247225 DPH3P1Q9H4G8 78 aa12.8□□□□□ -0.36
SGPP1-201ENST00000247225 TMEM95Q3KNT9 176 aa12.8□□□□□ -0.36
SGPP1-201ENST00000247225 RAB9AP51151 201 aa12.8□□□□□ -0.36
SGPP1-201ENST00000247225 BLCAPP62952 87 aa12.8□□□□□ -0.36
SGPP1-201ENST00000247225 CENPVL3A0A0U1RRI6 287 aa12.79□□□□□ -0.36
SGPP1-201ENST00000247225 C11orf86A6NJI1 115 aa12.79□□□□□ -0.36
SGPP1-201ENST00000247225 NPFFO15130 113 aa12.79□□□□□ -0.36
SGPP1-201ENST00000247225 ZNF56Q15929 161 aa12.79□□□□□ -0.36
SGPP1-201ENST00000247225 Q8N6K4 173 aa12.79□□□□□ -0.36
SGPP1-201ENST00000247225 CNFNQ9BYD5 112 aa12.79□□□□□ -0.36
SGPP1-201ENST00000247225 ZNF688P0C7X2 276 aa12.79□□□□□ -0.36
SGPP1-201ENST00000247225 RNASE13Q5GAN3 156 aaKnown RBP12.79□□□□□ -0.36
SGPP1-201ENST00000247225 Q6ZS46 218 aa12.79□□□□□ -0.36
SGPP1-201ENST00000247225 PRSS2P07478 247 aa12.78□□□□□ -0.36
SGPP1-201ENST00000247225 MINOS1Q5TGZ0 78 aa12.78□□□□□ -0.36
SGPP1-201ENST00000247225 FAM159AQ6UWV7 190 aa12.78□□□□□ -0.36
SGPP1-201ENST00000247225 MINOS1-NBL1R4GNA1 71 aa12.78□□□□□ -0.36
SGPP1-201ENST00000247225 ABCA12Q86UK0 2595 aa12.78□□□□□ -0.36
SGPP1-201ENST00000247225 JMJD1CQ15652 2540 aa12.78□□□□□ -0.36
SGPP1-201ENST00000247225 ZANQ9Y493 2812 aa12.78□□□□□ -0.36
SGPP1-201ENST00000247225 TRAV2A0A0B4J234 112 aa12.78□□□□□ -0.36
SGPP1-201ENST00000247225 CKS1BP61024 79 aa12.78□□□□□ -0.36
SGPP1-201ENST00000247225 RHPN1-AS1Q9BWJ2 59 aa12.78□□□□□ -0.36
SGPP1-201ENST00000247225 KLK9Q9UKQ9 250 aa12.78□□□□□ -0.36
SGPP1-201ENST00000247225 ZNF48Q96MX3 618 aaPredicted RBP12.77□□□□□ -0.36
SGPP1-201ENST00000247225 SIRPDQ9H106 197 aa12.77□□□□□ -0.37
SGPP1-201ENST00000247225 CSMD2Q7Z408 3487 aa12.76□□□□□ -0.37
SGPP1-201ENST00000247225 K7ENP7 123 aa12.76□□□□□ -0.37
SGPP1-201ENST00000247225 UBE2E1P51965 193 aa12.76□□□□□ -0.37
SGPP1-201ENST00000247225 MORN3Q6PF18 240 aaPredicted RBP12.76□□□□□ -0.37
SGPP1-201ENST00000247225 ZFAND2AQ8N6M9 145 aa12.76□□□□□ -0.37
SGPP1-201ENST00000247225 TRBV7-3A0A075B6L6 115 aa12.76□□□□□ -0.37
SGPP1-201ENST00000247225 C1orf122Q6ZSJ8 110 aa12.76□□□□□ -0.37
SGPP1-201ENST00000247225 TRBV7-1A0A0A6YYK4 115 aa12.75□□□□□ -0.37
SGPP1-201ENST00000247225 KIR2DL4Q99706 377 aa12.75□□□□□ -0.37
SGPP1-201ENST00000247225 CELSR2Q9HCU4 2923 aa12.75□□□□□ -0.37
SGPP1-201ENST00000247225 H3BUX3 64 aa12.75□□□□□ -0.37
SGPP1-201ENST00000247225 C9orf47Q6ZRZ4 202 aa12.75□□□□□ -0.37
SGPP1-201ENST00000247225 NEXN-AS1Q8NBZ9 246 aa12.75□□□□□ -0.37
SGPP1-201ENST00000247225 NAV2Q8IVL1 2488 aa12.75□□□□□ -0.37
SGPP1-201ENST00000247225 PRM2P04554 102 aa12.75□□□□□ -0.37
SGPP1-201ENST00000247225 SPINK8P0C7L1 97 aa12.75□□□□□ -0.37
SGPP1-201ENST00000247225 COX8CQ7Z4L0 72 aa12.75□□□□□ -0.37
SGPP1-201ENST00000247225 MRAP2Q96G30 205 aa12.75□□□□□ -0.37
SGPP1-201ENST00000247225 DLX4Q92988 240 aaPredicted RBP12.74□□□□□ -0.37
SGPP1-201ENST00000247225 TOMM6Q96B49 74 aa12.74□□□□□ -0.37
SGPP1-201ENST00000247225 LRRK2Q5S007 2527 aa12.74□□□□□ -0.37
SGPP1-201ENST00000247225 MUC4Q99102 2169 aa12.74□□□□□ -0.37
SGPP1-201ENST00000247225 RBAKDNA6NC62 111 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms