RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 SLC25A20O43772 301 aa15.32■□□□□ 0.04
HOXC13-201ENST00000243056 GATA1P15976 413 aaPredicted RBP15.32■□□□□ 0.04
HOXC13-201ENST00000243056 TMEM78Q5T7P6 136 aa15.32■□□□□ 0.04
HOXC13-201ENST00000243056 CRIP2P52943 208 aaPredicted RBP15.32■□□□□ 0.04
HOXC13-201ENST00000243056 PLEKHB2Q96CS7 222 aa15.32■□□□□ 0.04
HOXC13-201ENST00000243056 DNAJC30Q96LL9 226 aa15.32■□□□□ 0.04
HOXC13-201ENST00000243056 CHCHD5Q9BSY4 110 aa15.32■□□□□ 0.04
HOXC13-201ENST00000243056 TNFRSF6BO95407 300 aa15.31■□□□□ 0.04
HOXC13-201ENST00000243056 SCGB1C2P0DMR2 95 aa15.31■□□□□ 0.04
HOXC13-201ENST00000243056 ZFP36P26651 326 aaKnown RBP15.31■□□□□ 0.04
HOXC13-201ENST00000243056 LINC01559Q495D7 138 aa15.31■□□□□ 0.04
HOXC13-201ENST00000243056 C21orf62Q9NYP8 219 aa15.31■□□□□ 0.04
HOXC13-201ENST00000243056 MSRB1Q9NZV6 116 aa15.31■□□□□ 0.04
HOXC13-201ENST00000243056 NDUFA11Q86Y39 141 aa15.31■□□□□ 0.04
HOXC13-201ENST00000243056 AAMDCQ9H7C9 122 aa15.31■□□□□ 0.04
HOXC13-201ENST00000243056 NXT2Q9NPJ8 142 aaKnown RBP15.31■□□□□ 0.04
HOXC13-201ENST00000243056 ABCA2Q9BZC7 2435 aa15.3■□□□□ 0.04
HOXC13-201ENST00000243056 SMIM9A6NGZ8 99 aa15.3■□□□□ 0.04
HOXC13-201ENST00000243056 C17orf77Q96MU5 243 aa15.3■□□□□ 0.04
HOXC13-201ENST00000243056 A0A1W2PPI3 338 aa15.29■□□□□ 0.04
HOXC13-201ENST00000243056 C9JAW5 83 aa15.29■□□□□ 0.04
HOXC13-201ENST00000243056 SH2D1AO60880 128 aa15.29■□□□□ 0.04
HOXC13-201ENST00000243056 PLNP26678 52 aa15.29■□□□□ 0.04
HOXC13-201ENST00000243056 RPUSD1Q9UJJ7 312 aaKnown RBP15.29■□□□□ 0.04
HOXC13-201ENST00000243056 DLX6P56179 175 aa15.28■□□□□ 0.04
HOXC13-201ENST00000243056 TMEM155Q4W5P6 130 aa15.28■□□□□ 0.04
HOXC13-201ENST00000243056 Q8N1Y9 231 aa15.28■□□□□ 0.04
HOXC13-201ENST00000243056 UNC79Q9P2D8 2635 aa15.28■□□□□ 0.04
HOXC13-201ENST00000243056 NOTCH2Q04721 2471 aa15.28■□□□□ 0.04
HOXC13-201ENST00000243056 IGHV3-21A0A0B4J1V1 117 aa15.28■□□□□ 0.04
HOXC13-201ENST00000243056 NTN5Q8WTR8 489 aaPredicted RBP15.28■□□□□ 0.04
HOXC13-201ENST00000243056 ONECUT1Q9UBC0 465 aa15.28■□□□□ 0.04
HOXC13-201ENST00000243056 IGLV2-18A0A075B6J9 118 aa15.27■□□□□ 0.04
HOXC13-201ENST00000243056 INS-IGF2F8WCM5 200 aa15.27■□□□□ 0.03
HOXC13-201ENST00000243056 IGHV4-30-2A0A087WSY4 118 aa15.26■□□□□ 0.03
HOXC13-201ENST00000243056 TRAV25A0A0B4J276 109 aa15.26■□□□□ 0.03
HOXC13-201ENST00000243056 RPL7P18124 248 aaKnown RBP15.26■□□□□ 0.03
HOXC13-201ENST00000243056 SRSF9Q13242 221 aaKnown RBP eCLIP15.26■□□□□ 0.03
HOXC13-201ENST00000243056 COX7A1P24310 79 aa15.26■□□□□ 0.03
HOXC13-201ENST00000243056 TRPT1Q86TN4 253 aaKnown RBP15.26■□□□□ 0.03
HOXC13-201ENST00000243056 MYOZ3Q8TDC0 251 aa15.26■□□□□ 0.03
HOXC13-201ENST00000243056 HIGD1AQ9Y241 93 aa15.26■□□□□ 0.03
HOXC13-201ENST00000243056 IGHV1-8P0DP01 117 aa15.25■□□□□ 0.03
HOXC13-201ENST00000243056 TRAV8-4A0A0B4J246 113 aa15.25■□□□□ 0.03
HOXC13-201ENST00000243056 M0R3E3 92 aa15.25■□□□□ 0.03
HOXC13-201ENST00000243056 Q8N8P6 123 aa15.25■□□□□ 0.03
HOXC13-201ENST00000243056 MAPK1IP1LQ8NDC0 245 aa15.25■□□□□ 0.03
HOXC13-201ENST00000243056 PSMG3-AS1Q96PY0 264 aa15.25■□□□□ 0.03
HOXC13-201ENST00000243056 LINC00574Q9H8X3 128 aa15.25■□□□□ 0.03
HOXC13-201ENST00000243056 IGHV4-61A0A0C4DH41 118 aa15.24■□□□□ 0.03
HOXC13-201ENST00000243056 ZNF815PA8K554 130 aa15.24■□□□□ 0.03
HOXC13-201ENST00000243056 LYZP61626 148 aa15.24■□□□□ 0.03
HOXC13-201ENST00000243056 TMEM14CQ9P0S9 112 aa15.24■□□□□ 0.03
HOXC13-201ENST00000243056 LMO4P61968 165 aa15.24■□□□□ 0.03
HOXC13-201ENST00000243056 SCGB1D4Q6XE38 83 aa15.24■□□□□ 0.03
HOXC13-201ENST00000243056 SIGLEC15Q6ZMC9 328 aa15.24■□□□□ 0.03
HOXC13-201ENST00000243056 CSPG4Q6UVK1 2322 aa15.24■□□□□ 0.03
HOXC13-201ENST00000243056 PRRC2AP48634 2157 aaKnown RBP15.23■□□□□ 0.03
HOXC13-201ENST00000243056 F8VRH5 84 aa15.23■□□□□ 0.03
HOXC13-201ENST00000243056 SUB1P53999 127 aaKnown RBP eCLIP15.23■□□□□ 0.03
HOXC13-201ENST00000243056 PRADC1Q9BSG0 188 aa15.23■□□□□ 0.03
HOXC13-201ENST00000243056 TLN2Q9Y4G6 2542 aa15.23■□□□□ 0.03
HOXC13-201ENST00000243056 TRBV19A0A075B6N1 114 aa15.23■□□□□ 0.03
HOXC13-201ENST00000243056 WIPF1O43516 503 aa15.23■□□□□ 0.03
HOXC13-201ENST00000243056 CFC1BP0CG36 223 aa15.23■□□□□ 0.03
HOXC13-201ENST00000243056 CFC1P0CG37 223 aa15.23■□□□□ 0.03
HOXC13-201ENST00000243056 EGR2P11161 476 aaPredicted RBP15.23■□□□□ 0.03
HOXC13-201ENST00000243056 MRPL23Q16540 153 aaKnown RBP15.23■□□□□ 0.03
HOXC13-201ENST00000243056 TEX49A0A1B0GTD5 131 aa15.22■□□□□ 0.03
HOXC13-201ENST00000243056 HCP5Q6MZN7 132 aa15.22■□□□□ 0.03
HOXC13-201ENST00000243056 BAALCQ8WXS3 180 aa15.22■□□□□ 0.03
HOXC13-201ENST00000243056 H7C1H1 209 aa15.22■□□□□ 0.03
HOXC13-201ENST00000243056 DUSP14O95147 198 aaKnown RBP15.22■□□□□ 0.03
HOXC13-201ENST00000243056 IGLC6P0CF74 106 aa15.22■□□□□ 0.03
HOXC13-201ENST00000243056 ZNF575Q86XF7 245 aa15.22■□□□□ 0.03
HOXC13-201ENST00000243056 TEX15Q9BXT5 2789 aa15.21■□□□□ 0.03
HOXC13-201ENST00000243056 TRAV2A0A0B4J234 112 aa15.21■□□□□ 0.03
HOXC13-201ENST00000243056 C10orf126Q8N4M7 172 aa15.21■□□□□ 0.03
HOXC13-201ENST00000243056 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.21■□□□□ 0.03
HOXC13-201ENST00000243056 PDZD2O15018 2839 aa15.21■□□□□ 0.02
HOXC13-201ENST00000243056 FAM19A5Q7Z5A7 132 aaPredicted RBP15.21■□□□□ 0.02
HOXC13-201ENST00000243056 MRPL20Q9BYC9 149 aaKnown RBP15.21■□□□□ 0.02
HOXC13-201ENST00000243056 ABCA1O95477 2261 aa15.2■□□□□ 0.02
HOXC13-201ENST00000243056 IGHV3-72A0A0B4J1Y9 119 aa15.2■□□□□ 0.02
HOXC13-201ENST00000243056 C10orf105Q8TEF2 133 aa15.2■□□□□ 0.02
HOXC13-201ENST00000243056 OOSP1A8MZH6 123 aa15.19■□□□□ 0.02
HOXC13-201ENST00000243056 SLC25A16P16260 332 aa15.19■□□□□ 0.02
HOXC13-201ENST00000243056 LY6G5BQ8NDX9 201 aa15.19■□□□□ 0.02
HOXC13-201ENST00000243056 LAGE3Q14657 143 aa15.19■□□□□ 0.02
HOXC13-201ENST00000243056 PRR25Q96S07 402 aa15.19■□□□□ 0.02
HOXC13-201ENST00000243056 PLXNB1O43157 2135 aa15.18■□□□□ 0.02
HOXC13-201ENST00000243056 KLHL30-AS1Q8NEE0 82 aa15.18■□□□□ 0.02
HOXC13-201ENST00000243056 TMEM167AQ8TBQ9 72 aa15.18■□□□□ 0.02
HOXC13-201ENST00000243056 TRAV12-1A0A0B4J245 112 aa15.17■□□□□ 0.02
HOXC13-201ENST00000243056 TIMM23O14925 209 aa15.17■□□□□ 0.02
HOXC13-201ENST00000243056 MRPS12O15235 138 aaKnown RBP15.17■□□□□ 0.02
HOXC13-201ENST00000243056 CREBBPQ92793 2442 aa15.17■□□□□ 0.02
HOXC13-201ENST00000243056 APELAP0DMC3 54 aa15.17■□□□□ 0.02
HOXC13-201ENST00000243056 ZNF80P51504 273 aaPredicted RBP15.17■□□□□ 0.02
HOXC13-201ENST00000243056 PIMREGQ9BSJ6 248 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms